Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P01010_001 | Banana | nucleus | 51.82 | 49.42 |
| GSMUA_Achr7P15150_001 | Banana | nucleus | 21.86 | 29.83 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 19.03 | 29.19 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 23.89 | 23.6 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 18.22 | 23.08 |
| GSMUA_Achr10P... | Banana | nucleus | 23.08 | 22.09 |
| GSMUA_Achr3P18260_001 | Banana | nucleus | 19.84 | 21.88 |
| GSMUA_Achr6P33410_001 | Banana | nucleus | 21.86 | 21.86 |
| GSMUA_Achr9P03270_001 | Banana | nucleus | 19.43 | 21.62 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 20.65 | 21.52 |
| GSMUA_Achr8P11850_001 | Banana | nucleus | 25.51 | 21.14 |
| GSMUA_Achr4P27160_001 | Banana | nucleus | 23.48 | 20.71 |
| GSMUA_Achr5P19980_001 | Banana | nucleus | 22.27 | 20.68 |
| GSMUA_Achr11P... | Banana | nucleus | 22.67 | 20.59 |
| GSMUA_Achr10P... | Banana | nucleus | 23.89 | 20.34 |
| GSMUA_Achr10P... | Banana | nucleus | 22.27 | 20.22 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 22.27 | 20.07 |
| GSMUA_Achr11P... | Banana | nucleus | 23.89 | 20.07 |
| GSMUA_Achr5P15160_001 | Banana | nucleus | 23.48 | 19.86 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 20.65 | 19.84 |
| GSMUA_Achr1P17670_001 | Banana | nucleus | 17.41 | 19.82 |
| GSMUA_Achr8P02600_001 | Banana | nucleus | 22.27 | 19.5 |
| GSMUA_Achr5P28660_001 | Banana | nucleus | 21.86 | 19.49 |
| GSMUA_Achr2P23020_001 | Banana | nucleus | 21.46 | 19.27 |
| GSMUA_Achr11P... | Banana | nucleus | 20.24 | 18.87 |
| GSMUA_Achr11P... | Banana | nucleus | 22.27 | 18.58 |
| GSMUA_Achr8P02150_001 | Banana | nucleus | 24.7 | 18.37 |
| GSMUA_Achr10P... | Banana | nucleus | 21.05 | 18.25 |
| GSMUA_Achr1P20550_001 | Banana | nucleus | 19.84 | 18.15 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 19.84 | 18.01 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.24 | 17.92 |
| GSMUA_Achr6P25190_001 | Banana | nucleus | 18.62 | 17.9 |
| GSMUA_Achr3P29620_001 | Banana | nucleus | 20.65 | 17.89 |
| GSMUA_Achr5P29110_001 | Banana | nucleus | 24.29 | 17.65 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 20.65 | 17.53 |
| GSMUA_Achr9P25010_001 | Banana | nucleus | 21.46 | 17.32 |
| GSMUA_Achr10P... | Banana | nucleus | 20.24 | 17.12 |
| GSMUA_Achr10P... | Banana | nucleus | 23.08 | 16.91 |
| GSMUA_Achr6P34180_001 | Banana | nucleus | 21.86 | 16.27 |
| GSMUA_Achr9P26560_001 | Banana | nucleus | 20.65 | 16.09 |
| GSMUA_Achr5P07150_001 | Banana | nucleus | 21.46 | 16.06 |
| TraesCS5B01G154100.1 | Wheat | nucleus | 21.86 | 15.98 |
| GSMUA_Achr8P02840_001 | Banana | nucleus | 19.84 | 15.96 |
| GSMUA_Achr9P09650_001 | Banana | nucleus | 19.43 | 15.89 |
| GSMUA_Achr11P... | Banana | nucleus | 23.08 | 15.88 |
| TraesCS5A01G155900.1 | Wheat | nucleus | 21.46 | 15.68 |
| HORVU5Hr1G048700.1 | Barley | nucleus | 21.05 | 15.62 |
| TraesCS5D01G161000.1 | Wheat | nucleus | 21.46 | 15.5 |
| GSMUA_Achr7P27030_001 | Banana | nucleus, plastid | 19.84 | 15.03 |
| GSMUA_Achr5P12010_001 | Banana | nucleus | 21.46 | 14.93 |
| GSMUA_Achr8P15860_001 | Banana | nucleus, plastid | 21.46 | 14.56 |
| GSMUA_Achr10P... | Banana | nucleus | 20.24 | 14.37 |
| GSMUA_Achr9P11530_001 | Banana | nucleus, plastid | 21.05 | 14.36 |
| GSMUA_Achr4P16590_001 | Banana | nucleus | 19.84 | 14.29 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 24.7 | 14.12 |
| Os02t0252400-01 | Rice | nucleus | 20.65 | 13.67 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr6G19530_001 | EnsemblPlants:GSMUA_Achr6P19530_001 | EnsemblPlants:GSMUA_Achr6T19530_001 |
| InterPro:IPR003851 | UniProt:M0T8F1 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | UniParc:UPI0002965A77 | InterPro:Znf_Dof | SEG:seg | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G19530_001]
Coordinates
chr6:-:13825296..13826039
Molecular Weight (calculated)
27447.9 Da
IEP (calculated)
6.113
GRAVY (calculated)
-0.563
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSHHDMLP CTPPQPVDVE LANSCPRCGS SDTKFCYYNN YSLSQPRYFC KACRRYWTKG GSLRNVPIGS GYRKSRRGRS SARLSSAVSV AAGGPDANSN
101: RRAPQSPIRP DLLTNEVAAP IAINLEALYA KYMNRSPEME SGVAIAAFDT ETTSRSSSCH CQMFSPVGDT TPLNQVNDRP FGNGDYNLYR ELSRSITLPV
201: EPVQSYISLD CQEEFESTTA CSMDHQQDRA NIDDWSLLDY SSLEAFY
101: RRAPQSPIRP DLLTNEVAAP IAINLEALYA KYMNRSPEME SGVAIAAFDT ETTSRSSSCH CQMFSPVGDT TPLNQVNDRP FGNGDYNLYR ELSRSITLPV
201: EPVQSYISLD CQEEFESTTA CSMDHQQDRA NIDDWSLLDY SSLEAFY
001: MERAEALTSS FIWRPNANAN AEITPSCPRC GSSNTKFCYY NNYSLTQPRY FCKGCRRYWT KGGSLRNVPV GGGCRKSRRP KSSSGNNTKT SLTANSGNPG
101: GGSPSIDLAL VYANFLNPKP DESILQENCD LATTDFLVDN PTGTSMDPSW SMDINDGHHD HYINPVEHIV EECGYNGLPP FPGEELLSLD TNGVWSDALL
201: IGHNHVDVGV TPVQAVHEPV VHFADESNDS TNLLFGSWSP FDFTADG
101: GGSPSIDLAL VYANFLNPKP DESILQENCD LATTDFLVDN PTGTSMDPSW SMDINDGHHD HYINPVEHIV EECGYNGLPP FPGEELLSLD TNGVWSDALL
201: IGHNHVDVGV TPVQAVHEPV VHFADESNDS TNLLFGSWSP FDFTADG
Arabidopsis Description
Dof-type zinc finger DNA-binding family protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.