Factsheet for TraesCS5A01G155900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G161000.1	Wheat	nucleus	91.12	90.06
TraesCS5B01G154100.1	Wheat	nucleus	89.35	89.35
HORVU5Hr1G048700.1	Barley	nucleus	84.32	85.59
Os02t0252400-01	Rice	nucleus	41.42	37.53
TraesCS6A01G255500.1	Wheat	nucleus	25.74	22.19
TraesCS2A01G402200.1	Wheat	nucleus	24.26	21.69
GSMUA_Achr6P19530_001	Banana	nucleus	15.68	21.46
TraesCS6A01G274000.1	Wheat	nucleus	18.93	20.91
TraesCS6A01G287700.1	Wheat	nucleus	17.16	19.93
TraesCS2A01G079200.1	Wheat	nucleus	18.64	19.33
TraesCS7A01G213400.1	Wheat	nucleus	15.98	19.01
TraesCS1A01G275000.1	Wheat	nucleus	17.75	18.99
TraesCS3A01G377000.1	Wheat	nucleus	18.05	18.43
TraesCS3A01G539000.1	Wheat	nucleus	14.5	18.22
TraesCS5A01G078100.1	Wheat	nucleus	18.05	17.84
TraesCS4A01G097800.1	Wheat	nucleus	19.53	17.23
TraesCS2A01G225900.1	Wheat	nucleus, plastid	18.05	17.13
TraesCS1A01G035200.1	Wheat	nucleus	16.86	15.79
TraesCS5A01G401800.1	Wheat	nucleus	17.16	15.22
TraesCS3A01G532200.1	Wheat	nucleus	15.98	15.21
TraesCS3A01G532000.1	Wheat	nucleus	15.98	14.52
TraesCS3A01G532100.1	Wheat	nucleus	15.68	13.98
TraesCS5A01G479400.1	Wheat	nucleus	16.57	11.99
TraesCS6A01G233700.1	Wheat	cytosol, mitochondrion, nucleus	7.4	11.52

Protein Annotations

EnsemblPlants:TraesCS5A01G155900.1	EnsemblPlantsGene:TraesCS5A01G155900	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	InterPro:Znf_Dof	PANTHER:PTHR31992	PFAM:PD007478	PFAM:PF02701	PFscan:PS50884
ScanProsite:PS01361	SEG:seg	MapMan:15.5.1.5	:	:	:

Description

No Description!

Coordinates

chr5A:-:334262614..334265152

Molecular Weight (calculated)

34786.6 Da

IEP (calculated)

8.001

GRAVY (calculated)

-0.435

Length

338 amino acids

Sequence
(BLAST)

001: MEEVFPSNSK SKAGQMAGEA TAAAEKKPRP KPEQKVECPR CKSGNTKFCY YNNYSMSQPR YFCKACRRYW THGGSLRNVP IGGGCRKPKR PGTSDAHKLG
101: VASSSEPTVV MPPSTCTGMN FANVLPTFMS AGFEIPSSLS LTAFGSSSSS NTAAVMSPGG TTSFLDVLRG GAGGLLDGSL SQNNGYYYGG PATGSGIGML
201: MTPPVASFGI PGPMQQHGDL VVGGNGIGAA TASIFQGGTG EEGDDGTGGV MGLQWQPQVG NGGGAGVVSG GVHHLGTGNN VTMGNNNIHN NNNNNSGGDD
301: NNGASSRDCY WINNGGSNPW QSLLNNSSLM ITQVEVPH

Best Arabidopsis Sequence Match ( AT5G60200.1 )
(BLAST)

001: MDHLLQHQDV FGNYNKAREA MGLSYSSNPT PLDNDQKKPS PATAVTRPQP PELALRCPRC DSTNTKFCYY NNYSLTQPRY FCKSCRRYWT KGGTLRNIPV
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM

Arabidopsis Description

DOF5.3Dof zinc finger protein DOF5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.