Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G207600.1 | Wheat | nucleus | 97.65 | 98.16 |
| TraesCS4B01G206800.1 | Wheat | nucleus | 96.34 | 97.62 |
| Bra009587.1-P | Field mustard | nucleus | 21.41 | 46.33 |
| KRH46814 | Soybean | nucleus | 34.99 | 36.51 |
| KRG99864 | Soybean | nucleus | 34.46 | 36.36 |
| KRH70477 | Soybean | nucleus | 33.16 | 34.23 |
| Solyc09g010680.2.1 | Tomato | nucleus | 35.25 | 33.92 |
| TraesCS5A01G078100.1 | Wheat | nucleus | 30.29 | 33.92 |
| CDY40358 | Canola | nucleus | 28.98 | 33.33 |
| PGSC0003DMT400023033 | Potato | nucleus | 34.99 | 33.25 |
| CDY70704 | Canola | nucleus | 31.07 | 32.6 |
| TraesCS1A01G035200.1 | Wheat | nucleus | 30.29 | 32.13 |
| CDY55422 | Canola | nucleus | 32.9 | 31.42 |
| CDY55549 | Canola | nucleus | 32.64 | 31.09 |
| CDX80822 | Canola | nucleus | 32.9 | 31.03 |
| Bra005725.1-P | Field mustard | nucleus | 32.64 | 31.02 |
| AT5G02460.1 | Thale cress | nucleus | 32.11 | 30.83 |
| CDY04855 | Canola | nucleus | 32.64 | 30.79 |
| Bra028872.1-P | Field mustard | nucleus | 32.64 | 30.79 |
| TraesCS3A01G539000.1 | Wheat | nucleus | 21.15 | 30.11 |
| TraesCS5A01G479400.1 | Wheat | nucleus | 36.55 | 29.98 |
| TraesCS3A01G532000.1 | Wheat | nucleus | 27.42 | 28.23 |
| TraesCS2A01G079200.1 | Wheat | nucleus | 22.72 | 26.69 |
| TraesCS2A01G225900.1 | Wheat | nucleus, plastid | 24.54 | 26.4 |
| TraesCS6A01G274000.1 | Wheat | nucleus | 19.58 | 24.51 |
| TraesCS3A01G532200.1 | Wheat | nucleus | 22.45 | 24.23 |
| TraesCS6A01G287700.1 | Wheat | nucleus | 17.75 | 23.37 |
| TraesCS3A01G532100.1 | Wheat | nucleus | 22.72 | 22.96 |
| TraesCS6A01G255500.1 | Wheat | nucleus | 23.24 | 22.7 |
| TraesCS2A01G402200.1 | Wheat | nucleus | 21.41 | 21.69 |
| TraesCS7A01G213400.1 | Wheat | nucleus | 15.93 | 21.48 |
| TraesCS1A01G275000.1 | Wheat | nucleus | 17.23 | 20.89 |
| TraesCS3A01G377000.1 | Wheat | nucleus | 17.49 | 20.24 |
| TraesCS5A01G155900.1 | Wheat | nucleus | 17.23 | 19.53 |
| TraesCS5A01G401800.1 | Wheat | nucleus | 17.23 | 17.32 |
| Bra009588.1-P | Field mustard | plastid | 7.83 | 16.85 |
| TraesCS6A01G233700.1 | Wheat | cytosol, mitochondrion, nucleus | 4.44 | 7.83 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G097800.1 | EnsemblPlantsGene:TraesCS4A01G097800 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003851 | InterPro:Znf_Dof | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF65 | PFAM:PD007478 | PFAM:PF02701 |
| PFscan:PS50884 | ScanProsite:PS01361 | SEG:seg | MapMan:15.5.1.5 | : | : |
Description
No Description!
Coordinates
chr4A:-:108871563..108872939
Molecular Weight (calculated)
39723.4 Da
IEP (calculated)
9.532
GRAVY (calculated)
-0.565
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFPPAAAYL DPPNWNNQQG QQQRATGGGG VGDAQHMPVD PTAGTAAGTP EVGGLPRSSA ANEAAAGQQA RPNSMTERAR MARVPQPEPA LKCPRCDSTN
101: TKFCYYNNYS LSQPRHFCKA CRRYWTRGGA LRSVPVGGGC RRNKRSSKSS AGAASSSKPS SSSARQLPGG ASSMPSTAAS TTLGCDGASI PPGLSSMSHH
201: LPFMGAMHPP GANLGLAFSA GLPQLAMQQH HHHMDGVDQF PLASGGGATF GASLEQWRVQ QQQQQQFPFL ELPPAPPMYQ LGLQANRAAG SSAAAPAPSP
301: AMFTLGQSSA STARRDEGSM KQADSKGQEM TLQRQFVMEA LRQGDGVWGG NASDNNGNGS GSWTMNIPGF HSSSGGGDGG GLL
101: TKFCYYNNYS LSQPRHFCKA CRRYWTRGGA LRSVPVGGGC RRNKRSSKSS AGAASSSKPS SSSARQLPGG ASSMPSTAAS TTLGCDGASI PPGLSSMSHH
201: LPFMGAMHPP GANLGLAFSA GLPQLAMQQH HHHMDGVDQF PLASGGGATF GASLEQWRVQ QQQQQQFPFL ELPPAPPMYQ LGLQANRAAG SSAAAPAPSP
301: AMFTLGQSSA STARRDEGSM KQADSKGQEM TLQRQFVMEA LRQGDGVWGG NASDNNGNGS GSWTMNIPGF HSSSGGGDGG GLL
001: MVFSSLPVNQ FDSQNWQQMI SILVFFSTSR LFKKLFLVDK NLFSCLLQGL MYNVFLTGLI FSLQGNQHQL ECVTTDQNPN NYLRQLSSPP TSQVAGSSQA
101: RVNSMVERAR IAKVPLPEAA LNCPRCDSTN TKFCYFNNYS LTQPRHFCKT CRRYWTRGGS LRNVPVGGGF RRNKRSKSRS KSTVVVSTDN TTSTSSLTSR
201: PSYSNPSKFH SYGQIPEFNS NLPILPPLQS LGDYNSSNTG LDFGGTQISN MISGMSSSGG ILDAWRIPPS QQAQQFPFLI NTTGLVQSSN ALYPLLEGGV
301: SATQTRNVKA EENDQDRGRD GDGVNNLSRN FLGNININSG RNEEYTSWGG NSSWTGFTSN NSTGHLSF
101: RVNSMVERAR IAKVPLPEAA LNCPRCDSTN TKFCYFNNYS LTQPRHFCKT CRRYWTRGGS LRNVPVGGGF RRNKRSKSRS KSTVVVSTDN TTSTSSLTSR
201: PSYSNPSKFH SYGQIPEFNS NLPILPPLQS LGDYNSSNTG LDFGGTQISN MISGMSSSGG ILDAWRIPPS QQAQQFPFLI NTTGLVQSSN ALYPLLEGGV
301: SATQTRNVKA EENDQDRGRD GDGVNNLSRN FLGNININSG RNEEYTSWGG NSSWTGFTSN NSTGHLSF
Arabidopsis Description
OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.