Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P23020_001 | Banana | nucleus | 71.71 | 67.27 |
| VIT_17s0000g08290.t01 | Wine grape | nucleus | 52.33 | 43.83 |
| KRH63537 | Soybean | nucleus | 52.71 | 39.53 |
| KRH54395 | Soybean | nucleus | 52.33 | 38.24 |
| PGSC0003DMT400069680 | Potato | nucleus | 41.09 | 37.86 |
| Solyc06g071480.2.1 | Tomato | nucleus | 40.7 | 37.63 |
| KRH03289 | Soybean | nucleus | 45.74 | 35.76 |
| KRH57071 | Soybean | nucleus | 44.96 | 35.15 |
| GSMUA_Achr4P30470_001 | Banana | nucleus | 21.71 | 34.78 |
| PGSC0003DMT400046598 | Potato | nucleus | 43.02 | 33.64 |
| Solyc03g112930.2.1 | Tomato | nucleus | 42.64 | 33.03 |
| CDX87270 | Canola | nucleus | 41.86 | 31.67 |
| Bra035873.1-P | Field mustard | nucleus | 41.47 | 31.47 |
| CDY16754 | Canola | nucleus | 41.47 | 31.47 |
| GSMUA_Achr3P18260_001 | Banana | nucleus | 26.74 | 30.8 |
| GSMUA_Achr11P... | Banana | nucleus | 34.11 | 29.93 |
| AT5G62940.1 | Thale cress | nucleus | 43.02 | 29.84 |
| CDY00341 | Canola | nucleus | 42.25 | 29.62 |
| GSMUA_Achr8P11850_001 | Banana | nucleus | 34.11 | 29.53 |
| GSMUA_Achr5P19980_001 | Banana | nucleus | 30.23 | 29.32 |
| GSMUA_Achr4P27160_001 | Banana | nucleus | 31.78 | 29.29 |
| GSMUA_Achr7P15150_001 | Banana | nucleus | 20.54 | 29.28 |
| CDX84369 | Canola | nucleus | 41.86 | 29.11 |
| GSMUA_Achr11P... | Banana | nucleus | 30.62 | 29.04 |
| Bra010136.1-P | Field mustard | nucleus | 41.09 | 28.8 |
| GSMUA_Achr10P... | Banana | nucleus | 28.68 | 27.21 |
| GSMUA_Achr10P... | Banana | nucleus | 29.07 | 26.32 |
| GSMUA_Achr5P28660_001 | Banana | nucleus | 27.91 | 25.99 |
| GSMUA_Achr1P20550_001 | Banana | nucleus | 27.13 | 25.93 |
| GSMUA_Achr11P... | Banana | nucleus | 29.07 | 25.34 |
| GSMUA_Achr5P07290_001 | Banana | nucleus | 26.74 | 25.18 |
| GSMUA_Achr9P03270_001 | Banana | nucleus | 21.32 | 24.77 |
| GSMUA_Achr3P13830_001 | Banana | nucleus | 25.97 | 24.63 |
| GSMUA_Achr11P... | Banana | nucleus | 25.19 | 24.53 |
| GSMUA_Achr6P33410_001 | Banana | nucleus | 23.26 | 24.29 |
| GSMUA_Achr10P... | Banana | nucleus | 27.13 | 24.14 |
| GSMUA_Achr5P15160_001 | Banana | nucleus | 27.13 | 23.97 |
| GSMUA_Achr5P23930_001 | Banana | nucleus | 17.83 | 23.59 |
| GSMUA_Achr5P01010_001 | Banana | nucleus | 23.64 | 23.55 |
| GSMUA_Achr6P19530_001 | Banana | nucleus | 22.09 | 23.08 |
| GSMUA_Achr8P02600_001 | Banana | nucleus | 25.19 | 23.05 |
| GSMUA_Achr8P32880_001 | Banana | nucleus | 22.09 | 22.8 |
| GSMUA_Achr1P03930_001 | Banana | nucleus | 22.48 | 22.57 |
| GSMUA_Achr9P04290_001 | Banana | nucleus | 25.19 | 22.34 |
| GSMUA_Achr5P07150_001 | Banana | nucleus | 27.52 | 21.52 |
| GSMUA_Achr5P29110_001 | Banana | nucleus | 28.29 | 21.47 |
| GSMUA_Achr6P25190_001 | Banana | nucleus | 20.93 | 21.01 |
| GSMUA_Achr10P... | Banana | nucleus | 23.64 | 20.89 |
| GSMUA_Achr1P17670_001 | Banana | nucleus | 17.44 | 20.74 |
| GSMUA_Achr9P25010_001 | Banana | nucleus | 24.42 | 20.59 |
| GSMUA_Achr10P... | Banana | nucleus | 26.74 | 20.47 |
| GSMUA_Achr3P10670_001 | Banana | nucleus | 18.6 | 20.25 |
| GSMUA_Achr11P... | Banana | nucleus | 26.74 | 19.22 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.54 | 19.0 |
| GSMUA_Achr9P11530_001 | Banana | nucleus, plastid | 26.36 | 18.78 |
| GSMUA_Achr8P15860_001 | Banana | nucleus, plastid | 26.36 | 18.68 |
| GSMUA_Achr10P... | Banana | nucleus | 25.19 | 18.68 |
| GSMUA_Achr3P29620_001 | Banana | nucleus | 20.54 | 18.6 |
| GSMUA_Achr8P02840_001 | Banana | nucleus | 22.09 | 18.57 |
| GSMUA_Achr8P02150_001 | Banana | nucleus | 23.64 | 18.37 |
| GSMUA_Achr6P34180_001 | Banana | nucleus | 23.64 | 18.37 |
| GSMUA_Achr9P09650_001 | Banana | nucleus | 21.32 | 18.21 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 30.23 | 18.06 |
| GSMUA_Achr9P26560_001 | Banana | nucleus | 22.09 | 17.98 |
| GSMUA_Achr7P27030_001 | Banana | nucleus, plastid | 22.48 | 17.79 |
| GSMUA_Achr4P16590_001 | Banana | nucleus | 22.48 | 16.91 |
| GSMUA_Achr5P12010_001 | Banana | nucleus | 21.71 | 15.77 |
Protein Annotations
| MapMan:15.5.1.5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr10G20450_001 | EnsemblPlants:GSMUA_Achr10P20450_001 | EnsemblPlants:GSMUA_Achr10T20450_001 |
| InterPro:IPR003851 | UniProt:M0RJX0 | PFAM:PD007478 | PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 |
| PANTHER:PTHR31992 | PANTHER:PTHR31992:SF80 | UniParc:UPI0002964330 | InterPro:Znf_Dof | SEG:seg | : |
Description
Putative Dof zinc finger protein DOF5.6 [Source:GMGC_GENE;Acc:GSMUA_Achr10G20450_001]
Coordinates
chr10:+:26429380..26430219
Molecular Weight (calculated)
28286.4 Da
IEP (calculated)
7.396
GRAVY (calculated)
-0.522
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQEDSGTNS SSPSSELISC SRPPVMDKRL RPQHDQALKC PRCDSTHTKF CYYNNYSLSQ PRYFCKTCRR YWTKGGTLRN VPVGGGCRKN KRPNALHQSF
101: PLVQLSHLES LTYTPRNIDF TECKYNLMLD NTMDGLDLMD TKFGAMFPRS HLPLGGGIAG LGEASHGFTS AGFHGSNACG FSIDGNHAAF METCQKLALP
201: LEGREEANAV DVKPSDRILS MEWQDQCCAD AGREAMGCSD GLGSWSGMMN GHGSSATM
101: PLVQLSHLES LTYTPRNIDF TECKYNLMLD NTMDGLDLMD TKFGAMFPRS HLPLGGGIAG LGEASHGFTS AGFHGSNACG FSIDGNHAAF METCQKLALP
201: LEGREEANAV DVKPSDRILS MEWQDQCCAD AGREAMGCSD GLGSWSGMMN GHGSSATM
001: MGLTSLQVCM DSDWLQESES SGGSMLDSST NSPSAADILA ACSTRPQASA VAVAAAALMD GGRRLRPPHD HPQKCPRCES THTKFCYYNN YSLSQPRYFC
101: KTCRRYWTKG GTLRNIPVGG GCRKNKKPSS SNSSSSTSSG KKPSNIVTAN TSDLMALAHS HQNYQHSPLG FSHFGGMMGS YSTPEHGNVG FLESKYGGLL
201: SQSPRPIDFL DSKFDLMGVN NDNLVMVNHG SNGDHHHHHN HHMGLNHGVG LNNNNNNGGF NGISTGGNGN GGGLMDISTC QRLMLSNYDH HHYNHQEDHQ
301: RVATIMDVKP NPKLLSLDWQ QDQCYSNGGG SGGAGKSDGG GYGNGGYING LGSSWNGLMN GYGTSTKTNS LV
101: KTCRRYWTKG GTLRNIPVGG GCRKNKKPSS SNSSSSTSSG KKPSNIVTAN TSDLMALAHS HQNYQHSPLG FSHFGGMMGS YSTPEHGNVG FLESKYGGLL
201: SQSPRPIDFL DSKFDLMGVN NDNLVMVNHG SNGDHHHHHN HHMGLNHGVG LNNNNNNGGF NGISTGGNGN GGGLMDISTC QRLMLSNYDH HHYNHQEDHQ
301: RVATIMDVKP NPKLLSLDWQ QDQCYSNGGG SGGAGKSDGG GYGNGGYING LGSSWNGLMN GYGTSTKTNS LV
Arabidopsis Description
DOF5.6HCA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UF22]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.