Factsheet for HORVU5Hr1G113220.6

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G493000.1	Wheat	nucleus	94.44	93.41
TraesCS5B01G492600.1	Wheat	nucleus	92.44	92.04
TraesCS5A01G479400.1	Wheat	nucleus	94.89	91.43
Zm00001d034651_P002	Maize	nucleus	59.56	64.89
CDY07781	Canola	nucleus	24.22	50.93
GSMUA_Achr6P33410_001	Banana	nucleus	26.44	48.18
VIT_08s0007g00180.t01	Wine grape	nucleus	35.11	45.8
HORVU5Hr1G113190.2	Barley	nucleus, plastid	27.33	43.01
Bra000008.1-P	Field mustard	nucleus	27.78	42.66
AT2G37590.1	Thale cress	nucleus	30.67	41.82
CDX93365	Canola	nucleus	28.44	41.42
CDX79743	Canola	nucleus	26.89	41.3
Bra005181.1-P	Field mustard	nucleus	29.78	41.23
CDX74947	Canola	nucleus	29.56	40.92
CDY65260	Canola	nucleus	28.0	40.78
CDX91370	Canola	nucleus	29.33	40.62
Bra017171.1-P	Field mustard	nucleus	27.78	40.45
Solyc10g086440.1.1	Tomato	nucleus	31.78	39.5
PGSC0003DMT400049288	Potato	nucleus	32.0	38.5
HORVU5Hr1G021290.1	Barley	nucleus	28.0	36.52
HORVU1Hr1G005390.2	Barley	nucleus	25.33	31.23
HORVU3Hr1G116270.2	Barley	nucleus	23.33	30.17
HORVU3Hr1G116260.1	Barley	nucleus	21.11	30.16
HORVU3Hr1G116220.1	Barley	nucleus, plastid	26.22	29.72
HORVU2Hr1G013060.1	Barley	nucleus, plastid	16.44	24.83
HORVU5Hr1G097600.1	Barley	nucleus, plastid	11.56	22.41
HORVU7Hr1G043250.2	Barley	nucleus	13.78	21.83
HORVU3Hr1G083460.1	Barley	nucleus	16.0	21.75
HORVU1Hr1G074140.1	Barley	nucleus, vacuole	15.56	20.35
HORVU6Hr1G065250.3	Barley	nucleus	20.89	20.0
HORVU5Hr1G097620.1	Barley	nucleus	16.0	18.65
HORVU5Hr1G048700.1	Barley	nucleus	12.89	17.42
HORVU2Hr1G095390.1	Barley	cytosol, mitochondrion, nucleus	6.22	12.67
HORVU2Hr1G047750.4	Barley	plastid	5.78	11.5

Protein Annotations

MapMan:15.5.1.5	UniProt:A0A287SS88	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU5Hr1G113220
EnsemblPlants:HORVU5Hr1G113220.6	InterPro:IPR003851	PFAM:PD007478	PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884
PANTHER:PTHR31992	PANTHER:PTHR31992:SF66	UniParc:UPI000B467E8F	InterPro:Znf_Dof	SEG:seg	:

Description

No Description!

Coordinates

chrchr5H:-:641258794..641261214

Molecular Weight (calculated)

46170.7 Da

IEP (calculated)

9.428

GRAVY (calculated)

-0.639

Length

450 amino acids

Sequence
(BLAST)

001: MVFSSVPLYH DPPNWNQNHS QQQQQQQQQQ QQQQQQLSHH AGQMFASGGG GGGVEMHHHQ QQQHQQYQQQ QQHHHQLRPP MPPPGAMMAP RPDGMGSAVA
101: LSGAGGGGGG GAGGGPTGGA VVRPGSMTDR ARMAKIPQPE PGLKCPRCES TNTKFCYFNN YSLTQPRHFC KTCRRYWTRG GTLRNVPVGG GCRRNKRTKS
201: SKSSSSAASA SGGGTSSSTT SSTTTAGGGN GNGSSAAAAA GVMMSSQGQG HGQMPFFGSL HPLGAGNGDH YGTGASRLGF PGLDPVDYQL GAGGAAAAAM
301: GLEPWRLPQM QQFPFFGRAD GMHQQQQQMA GLYPFDTADA SGFAGEMMGV VGGSKQQVPG SAGLITQLAS VKMEDNPPSN NAMAGAASAR EFLGLPGNIQ
401: FWGGGNNGAG SNDNGGSHSS GTVAPGGAAG GGGWVDHLPG FNSSSSGNLL

Best Arabidopsis Sequence Match ( AT3G55370.1 )
(BLAST)

001: MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR
101: HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG
201: TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY
301: TSWGGNSSWT GFTSNNSTGH LSF

Arabidopsis Description

OBP3OBF-binding protein 3 [Source:UniProtKB/TrEMBL;Acc:F4IWU4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.