Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017575_P001 | Maize | nucleus | 76.12 | 77.54 |
| Os04t0567800-01 | Rice | nucleus | 61.94 | 65.01 |
| KXG31020 | Sorghum | nucleus | 76.9 | 64.11 |
| TraesCS2A01G402200.1 | Wheat | nucleus | 61.42 | 61.9 |
| TraesCS2B01G420400.1 | Wheat | nucleus | 60.89 | 61.7 |
| TraesCS2D01G399500.1 | Wheat | nucleus | 61.15 | 61.64 |
| Zm00001d026096_P001 | Maize | nucleus, plastid | 55.64 | 59.55 |
| KRG97209 | Soybean | nucleus | 30.18 | 45.63 |
| KRH68931 | Soybean | nucleus | 32.28 | 41.98 |
| AT3G61850.4 | Thale cress | nucleus | 33.07 | 38.89 |
| CDX71704 | Canola | nucleus | 32.81 | 37.31 |
| Bra014418.1-P | Field mustard | nucleus | 29.92 | 36.77 |
| CDX86775 | Canola | nucleus | 29.92 | 36.66 |
| AT2G46590.2 | Thale cress | nucleus | 35.43 | 36.59 |
| CDY64622 | Canola | nucleus | 30.71 | 36.22 |
| CDX80030 | Canola | nucleus | 34.38 | 35.99 |
| Bra004525.1-P | Field mustard | nucleus | 33.07 | 35.8 |
| CDY41539 | Canola | nucleus | 34.12 | 35.52 |
| CDX95706 | Canola | nucleus | 34.38 | 35.5 |
| Bra000429.1-P | Field mustard | nucleus | 34.38 | 35.5 |
| CDX83357 | Canola | nucleus | 34.38 | 35.03 |
| CDY57876 | Canola | nucleus | 32.81 | 34.63 |
| CDY61727 | Canola | nucleus | 33.6 | 34.22 |
| CDY27314 | Canola | nucleus | 32.28 | 34.17 |
| Bra039272.1-P | Field mustard | nucleus, plastid | 32.28 | 34.17 |
| CDX89134 | Canola | extracellular, vacuole | 30.97 | 33.91 |
| GSMUA_Achr2P09970_001 | Banana | nucleus | 36.48 | 32.18 |
| Os02t0707200-00 | Rice | nucleus | 22.83 | 30.21 |
| Os02t0252400-01 | Rice | nucleus | 25.98 | 26.54 |
| Os02t0726300-01 | Rice | nucleus | 19.42 | 26.24 |
| Os07t0236700-01 | Rice | nucleus | 23.62 | 25.5 |
| Os06t0284500-00 | Rice | nucleus | 18.9 | 24.91 |
| Os12t0569900-01 | Rice | nucleus | 22.57 | 24.71 |
| Os01t0865800-00 | Rice | nucleus | 21.26 | 24.62 |
| Os03t0821200-00 | Rice | nucleus | 25.46 | 23.43 |
| Os05t0440000-00 | Rice | nucleus | 19.68 | 22.94 |
| Os05t0112200-01 | Rice | nucleus | 17.32 | 22.76 |
| Os03t0764900-01 | Rice | nucleus | 19.68 | 20.89 |
| Os07t0508900-00 | Rice | cytosol | 1.31 | 12.5 |
| Os03t0276300-00 | Rice | cytosol | 3.67 | 10.07 |
| Os07t0508700-00 | Rice | cytosol | 1.84 | 6.73 |
Protein Annotations
| MapMan:15.5.1.5 | EntrezGene:4330293 | EMBL:AB028130 | UniProt:B9F1L8 | ProteinID:BAD29458.1 | ProteinID:BAF09630.1 |
| ProteinID:BAS80255.1 | ProteinID:BAS80256.1 | ProteinID:EEE57560.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0046872 | EMBL:GQ183531 | InterPro:IPR003851 | EnsemblPlantsGene:Os02g0673700 | EnsemblPlants:Os02t0673700-01 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF28 | UniParc:UPI00019332B2 |
| RefSeq:XP_015627550.1 | RefSeq:XP_015627551.1 | InterPro:Znf_Dof | SEG:seg | : | : |
Description
RICE DOF DAILY FLUCTUATIONS 1Similar to OSIGBa0103M18.3 protein. (Os02t0673700-01);Similar to OSIGBa0103M18.3 protein. (Os02t0673700-02)
Coordinates
chr2:-:27435303..27438545
Molecular Weight (calculated)
38548.0 Da
IEP (calculated)
8.735
GRAVY (calculated)
-0.398
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAAHWHQGL GLVKPMEEML MGANPNPNGS SNQPPPPPSS AASAQRPIAP PAAGAAAGAG AAGAGAGTER RARPQKEKAL NCPRCNSTNT KFCYYNNYSL
101: QQPRYFCKTC RRYWTEGGSL RNVPVGGGSR KNKRSSSSVV PSAAASASTS AAVSGSVPVG LAAKNPKLMH EGAQDLNLAF PHHHGRALQP PEFTAFPSLE
201: SSSVCNPGGN LAAANGAGGR GSVGAFSAME LLRSTGCYVP LPQMAPLGMP AEYAAAGFHL GEFRMPPPPQ QQQQQQAQTV LGFSLDTHGA GAGGGSGVFG
301: ACSAGLQESA AGRLLFPFED LKPVVSAAAG DANSGGDHQY DHGKNQGGGG GVIGGHEAPG FWNSSMIGNG SSNGGGGGGS W
101: QQPRYFCKTC RRYWTEGGSL RNVPVGGGSR KNKRSSSSVV PSAAASASTS AAVSGSVPVG LAAKNPKLMH EGAQDLNLAF PHHHGRALQP PEFTAFPSLE
201: SSSVCNPGGN LAAANGAGGR GSVGAFSAME LLRSTGCYVP LPQMAPLGMP AEYAAAGFHL GEFRMPPPPQ QQQQQQAQTV LGFSLDTHGA GAGGGSGVFG
301: ACSAGLQESA AGRLLFPFED LKPVVSAAAG DANSGGDHQY DHGKNQGGGG GVIGGHEAPG FWNSSMIGNG SSNGGGGGGS W
001: MDTAQWPQEI VVKPLEEIVT NTCPKPQPQP LQPQQPPSVG GERKARPEKD QAVNCPRCNS TNTKFCYYNN YSLTQPRYFC KGCRRYWTEG GSLRNIPVGG
101: GSRKNKRSHS SSSDISNNHS DSTQPATKKH LSDHHHHLMS MSQQGLTGQN PKFLETTQQD LNLGFSPHGM IRTNFTDLIH NIGNNTNKSN NNNNPLIVSS
201: CSAMATSSLD LIRNNSNNGN SSNSSFMGFP VHNQDPASGG FSMQDHYKPC NTNTTLLGFS LDHHHNNGFH GGFQGGEEGG EGGDDVNGRH LFPFEDLKLP
301: VSSSSATINV DINEHQKRGS GSDAAATSGG YWTGMLSGGS WC
101: GSRKNKRSHS SSSDISNNHS DSTQPATKKH LSDHHHHLMS MSQQGLTGQN PKFLETTQQD LNLGFSPHGM IRTNFTDLIH NIGNNTNKSN NNNNPLIVSS
201: CSAMATSSLD LIRNNSNNGN SSNSSFMGFP VHNQDPASGG FSMQDHYKPC NTNTTLLGFS LDHHHNNGFH GGFQGGEEGG EGGDDVNGRH LFPFEDLKLP
301: VSSSSATINV DINEHQKRGS GSDAAATSGG YWTGMLSGGS WC
Arabidopsis Description
DOF4.6Dof zinc finger protein DOF4.6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LAP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.