Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039272.1-P | Field mustard | nucleus, plastid | 95.99 | 99.72 |
| CDY27314 | Canola | nucleus | 94.65 | 98.33 |
| CDX80030 | Canola | nucleus | 86.63 | 89.01 |
| AT2G46590.2 | Thale cress | nucleus | 87.7 | 88.89 |
| CDY41539 | Canola | nucleus | 85.56 | 87.43 |
| CDX95706 | Canola | nucleus | 85.83 | 86.99 |
| CDX83357 | Canola | nucleus | 86.36 | 86.36 |
| CDX71704 | Canola | nucleus | 59.89 | 66.87 |
| CDY64622 | Canola | nucleus | 55.62 | 64.4 |
| CDX86775 | Canola | nucleus | 53.48 | 64.31 |
| CDY70840 | Canola | nucleus | 18.72 | 61.95 |
| CDY57876 | Canola | nucleus | 59.63 | 61.77 |
| CDX89134 | Canola | extracellular, vacuole | 56.15 | 60.34 |
| KRG97209 | Soybean | nucleus | 33.42 | 49.6 |
| KRH68931 | Soybean | nucleus | 34.49 | 44.03 |
| CDY71684 | Canola | nucleus | 35.03 | 39.1 |
| CDY72657 | Canola | nucleus | 30.48 | 39.04 |
| CDY51722 | Canola | nucleus | 28.88 | 38.85 |
| CDY03494 | Canola | nucleus | 35.29 | 38.37 |
| CDY07156 | Canola | nucleus | 28.61 | 38.35 |
| CDY35454 | Canola | nucleus | 35.03 | 38.3 |
| CDY71763 | Canola | nucleus | 35.03 | 38.19 |
| CDX92613 | Canola | nucleus | 35.03 | 38.19 |
| GSMUA_Achr4P27160_001 | Banana | nucleus | 27.27 | 36.43 |
| CDY08392 | Canola | nucleus | 31.28 | 34.62 |
| TraesCS2B01G420400.1 | Wheat | nucleus | 34.49 | 34.31 |
| TraesCS2D01G399500.1 | Wheat | nucleus | 34.49 | 34.13 |
| TraesCS2A01G402200.1 | Wheat | nucleus | 34.49 | 34.13 |
| Zm00001d051439_P001 | Maize | nucleus | 33.42 | 34.06 |
| Zm00001d017575_P001 | Maize | nucleus | 33.96 | 33.96 |
| Os04t0567800-01 | Rice | nucleus | 32.89 | 33.88 |
| Os02t0673700-01 | Rice | nucleus | 34.22 | 33.6 |
| KXG26925 | Sorghum | nucleus | 34.22 | 32.99 |
| TraesCS6A01G255500.1 | Wheat | nucleus | 34.49 | 32.91 |
| Zm00001d026096_P001 | Maize | nucleus, plastid | 31.28 | 32.87 |
| TraesCS6D01G236700.1 | Wheat | nucleus | 34.22 | 32.74 |
| TraesCS6B01G270100.1 | Wheat | nucleus | 33.42 | 32.13 |
| CDY29082 | Canola | nucleus | 19.25 | 30.0 |
| CDX87189 | Canola | nucleus | 19.79 | 29.6 |
| CDX90602 | Canola | nucleus | 18.98 | 29.46 |
| CDY24798 | Canola | nucleus | 34.49 | 28.48 |
| CDY07781 | Canola | nucleus | 16.04 | 28.04 |
| CDX78095 | Canola | nucleus | 17.91 | 27.69 |
| CDY31568 | Canola | nucleus | 18.98 | 27.52 |
| CDY59600 | Canola | nucleus | 17.91 | 27.46 |
| CDY16836 | Canola | nucleus | 19.52 | 27.34 |
| CDX80191 | Canola | nucleus | 18.72 | 27.24 |
| KXG31020 | Sorghum | nucleus | 33.16 | 27.13 |
| CDY53379 | Canola | nucleus | 15.78 | 26.94 |
| CDY00341 | Canola | nucleus | 26.47 | 26.9 |
| HORVU6Hr1G065250.3 | Barley | nucleus | 33.69 | 26.81 |
| CDY09221 | Canola | nucleus | 18.45 | 26.74 |
| Zm00001d002642_P001 | Maize | nucleus | 34.22 | 26.72 |
| CDX84369 | Canola | nucleus | 26.47 | 26.68 |
| CDX87270 | Canola | nucleus | 23.8 | 26.1 |
| CDX71050 | Canola | nucleus | 17.65 | 26.09 |
| CDY08775 | Canola | nucleus | 13.64 | 26.02 |
| CDY16754 | Canola | nucleus | 23.53 | 25.88 |
| CDY02191 | Canola | nucleus | 20.32 | 25.85 |
| CDY40813 | Canola | nucleus | 19.52 | 25.8 |
| CDY69145 | Canola | nucleus, plastid | 21.39 | 25.4 |
| CDY42836 | Canola | nucleus | 19.25 | 25.17 |
| CDX73385 | Canola | nucleus | 20.05 | 24.83 |
| CDX88742 | Canola | nucleus | 17.91 | 24.19 |
| CDY35729 | Canola | nucleus | 19.25 | 24.08 |
| CDY70666 | Canola | nucleus | 18.98 | 23.91 |
| CDX77184 | Canola | nucleus | 16.31 | 23.83 |
| CDY72049 | Canola | nucleus | 18.72 | 23.57 |
| CDY50231 | Canola | nucleus | 15.78 | 23.32 |
| CDY04620 | Canola | nucleus | 15.78 | 23.23 |
| CDX90142 | Canola | nucleus | 19.52 | 23.1 |
| CDY00373 | Canola | nucleus | 16.04 | 23.08 |
| CDY61064 | Canola | nucleus | 16.04 | 22.99 |
| CDY65260 | Canola | nucleus | 18.98 | 22.98 |
| CDX79743 | Canola | nucleus | 17.91 | 22.87 |
| CDX93365 | Canola | nucleus | 18.72 | 22.65 |
| CDX74947 | Canola | nucleus | 19.25 | 22.15 |
| CDY66590 | Canola | nucleus | 18.98 | 21.71 |
| CDY15678 | Canola | nucleus | 18.98 | 21.71 |
| CDX91370 | Canola | nucleus | 18.72 | 21.54 |
| CDX76102 | Canola | nucleus | 21.93 | 21.52 |
| CDY40213 | Canola | nucleus | 20.05 | 21.13 |
| CDY70838 | Canola | nucleus | 16.84 | 20.59 |
| CDX95139 | Canola | nucleus | 18.45 | 20.54 |
| CDY40358 | Canola | nucleus | 18.18 | 20.42 |
| CDY37834 | Canola | nucleus | 16.58 | 20.39 |
| CDY15624 | Canola | nucleus | 18.18 | 20.36 |
| CDY70312 | Canola | nucleus | 15.24 | 20.07 |
| CDX77212 | Canola | nucleus | 18.18 | 20.0 |
| CDY33948 | Canola | nucleus | 16.04 | 19.87 |
| CDX81292 | Canola | nucleus | 14.71 | 19.5 |
| CDY31735 | Canola | nucleus | 17.91 | 19.48 |
| CDY70704 | Canola | nucleus | 18.98 | 19.45 |
| CDY61965 | Canola | nucleus | 15.51 | 18.65 |
| CDY06274 | Canola | nucleus | 15.51 | 18.47 |
| CDY55422 | Canola | nucleus | 19.79 | 18.45 |
| CDY04855 | Canola | nucleus | 19.79 | 18.23 |
| CDY55549 | Canola | nucleus | 19.52 | 18.16 |
| CDX80822 | Canola | nucleus | 19.52 | 17.98 |
| CDY08776 | Canola | nucleus | 2.67 | 11.63 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078JC12 | UniProt:A0A078JC12 | EnsemblPlants:CDY61727 | ProteinID:CDY61727 | ProteinID:CDY61727.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00034274001 | InterPro:IPR003851 | PFAM:PD007478 | PFAM:PF02701 |
| ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF15 | UniParc:UPI0004EE0142 | InterPro:Znf_Dof |
| SEG:seg | : | : | : | : | : |
Description
BnaA04g27160DBnaA04g27160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JC12]
Coordinates
chrLK034032:-:23393..25236
Molecular Weight (calculated)
40890.1 Da
IEP (calculated)
8.918
GRAVY (calculated)
-0.837
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MDATKWTQGF QEMMNVKPME QIMIPNNNTH QSNTTSSARP NTVLTSSGGV SAAGAIVSTG VSNSNNTSVV VERKSRPQEK INCPRCNSTN TKFCYYNNYS
101: LTQPRYFCKG CRRYWTEGGS LRNVPVGGSS RKNKRSSSSN ILQTTPSSLG LTTTLPDLNP PIIFSNQIPN KSKGASQDLN MLSFPVMQDQ HVHMSKFLQM
201: HKMEGNGNMT HQQPSSSSSL YGSSSSPVSA LELLRTGVNV SSRSGINSFM PSGPMMDSSN NVMYTSSGFP TMVDYKTSNL SFSTDHQGLE HNNNNNNNNN
301: NNSSGDAHSD HHQGRVLFPF GDQMKELSSS ITQEVDHDDN QQQKSHGNNN NNNSSPNNGY WSGMFSTTGG GSSW
101: LTQPRYFCKG CRRYWTEGGS LRNVPVGGSS RKNKRSSSSN ILQTTPSSLG LTTTLPDLNP PIIFSNQIPN KSKGASQDLN MLSFPVMQDQ HVHMSKFLQM
201: HKMEGNGNMT HQQPSSSSSL YGSSSSPVSA LELLRTGVNV SSRSGINSFM PSGPMMDSSN NVMYTSSGFP TMVDYKTSNL SFSTDHQGLE HNNNNNNNNN
301: NNSSGDAHSD HHQGRVLFPF GDQMKELSSS ITQEVDHDDN QQQKSHGNNN NNNSSPNNGY WSGMFSTTGG GSSW
001: MDATKWTQGF QEMMNVKPME QIMIPNNNTH QPNTTSNARP NTILTSNGVS TAGATVSGVS NNNNNTAVVA ERKARPQEKL NCPRCNSTNT KFCYYNNYSL
101: TQPRYFCKGC RRYWTEGGSL RNVPVGGSSR KNKRSSSSSS SNILQTIPSS LPDLNPPILF SNQIHNKSKG SSQDLNLLSF PVMQDQHHHH VHMSQFLQMP
201: KMEGNGNITH QQQPSSSSSV YGSSSSPVSA LELLRTGVNV SSRSGINSSF MPSGSMMDSN TVLYTSSGFP TMVDYKPSNL SFSTDHQGLG HNSNNRSEAL
301: HSDHHQQGRV LFPFGDQMKE LSSSITQEVD HDDNQQQKSH GNNNNNNNSS PNNGYWSGMF STTGGGSSW
101: TQPRYFCKGC RRYWTEGGSL RNVPVGGSSR KNKRSSSSSS SNILQTIPSS LPDLNPPILF SNQIHNKSKG SSQDLNLLSF PVMQDQHHHH VHMSQFLQMP
201: KMEGNGNITH QQQPSSSSSV YGSSSSPVSA LELLRTGVNV SSRSGINSSF MPSGSMMDSN TVLYTSSGFP TMVDYKPSNL SFSTDHQGLG HNSNNRSEAL
301: HSDHHQQGRV LFPFGDQMKE LSSSITQEVD HDDNQQQKSH GNNNNNNNSS PNNGYWSGMF STTGGGSSW
Arabidopsis Description
DOF2.5Dof zinc finger protein DOF2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.