Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT2G28810.1 | CDX84286 | AT2G34710.1 | 21245844 |
AT2G28810.1 | CDY31635 | AT2G34710.1 | 21245844 |
AT2G28810.1 | CDY43661 | AT2G34710.1 | 21245844 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra035667.1-P | Field mustard | nucleus | 97.06 | 95.93 |
CDY31735 | Canola | nucleus | 97.06 | 95.93 |
AT2G28810.1 | Thale cress | nucleus | 80.0 | 80.0 |
CDY15624 | Canola | nucleus | 56.76 | 57.78 |
CDY06274 | Canola | nucleus | 52.65 | 57.01 |
CDX95139 | Canola | nucleus | 55.88 | 56.55 |
CDY61965 | Canola | nucleus | 51.47 | 56.27 |
CDY70840 | Canola | nucleus | 16.47 | 49.56 |
KRH24808 | Soybean | nucleus | 38.53 | 42.67 |
VIT_06s0004g04520.t01 | Wine grape | nucleus | 38.53 | 40.94 |
CDY07781 | Canola | nucleus | 24.41 | 38.78 |
KRH29808 | Soybean | nucleus, plastid | 37.06 | 37.61 |
KRH10276 | Soybean | nucleus | 31.76 | 35.53 |
KRH23056 | Soybean | nucleus | 27.94 | 35.32 |
PGSC0003DMT400060216 | Potato | nucleus | 31.18 | 35.1 |
CDX73385 | Canola | nucleus | 29.71 | 33.44 |
CDY40358 | Canola | nucleus | 32.65 | 33.33 |
CDX79743 | Canola | nucleus | 28.24 | 32.76 |
Solyc05g054510.1.1 | Tomato | nucleus | 28.24 | 32.21 |
CDY69145 | Canola | nucleus, plastid | 29.71 | 32.06 |
CDY65260 | Canola | nucleus | 29.12 | 32.04 |
CDX93365 | Canola | nucleus | 28.82 | 31.72 |
CDX74947 | Canola | nucleus | 30.0 | 31.38 |
CDY70704 | Canola | nucleus | 33.53 | 31.23 |
CDX91370 | Canola | nucleus | 29.71 | 31.08 |
CDY08775 | Canola | nucleus | 17.65 | 30.61 |
CDY55549 | Canola | nucleus | 35.0 | 29.6 |
CDY40213 | Canola | nucleus | 30.88 | 29.58 |
CDY55422 | Canola | nucleus | 34.41 | 29.18 |
CDX80822 | Canola | nucleus | 34.71 | 29.06 |
CDY04855 | Canola | nucleus | 34.41 | 28.82 |
CDX76102 | Canola | nucleus | 31.76 | 28.35 |
CDX87189 | Canola | nucleus | 19.71 | 26.8 |
CDX81292 | Canola | nucleus | 21.18 | 25.53 |
CDY70312 | Canola | nucleus | 21.18 | 25.35 |
CDY16836 | Canola | nucleus | 19.12 | 24.34 |
CDY33948 | Canola | nucleus | 21.47 | 24.17 |
CDY53379 | Canola | nucleus | 15.29 | 23.74 |
CDY40813 | Canola | nucleus | 19.71 | 23.67 |
CDY70666 | Canola | nucleus | 20.59 | 23.57 |
CDY72049 | Canola | nucleus | 20.59 | 23.57 |
CDY37834 | Canola | nucleus | 20.88 | 23.36 |
CDX80191 | Canola | nucleus | 17.65 | 23.35 |
CDY29082 | Canola | nucleus | 16.47 | 23.33 |
CDY31568 | Canola | nucleus | 17.65 | 23.26 |
CDY09221 | Canola | nucleus | 17.65 | 23.26 |
CDX90602 | Canola | nucleus | 16.47 | 23.24 |
CDY70838 | Canola | nucleus | 20.88 | 23.2 |
CDY42836 | Canola | nucleus | 19.41 | 23.08 |
CDX71050 | Canola | nucleus | 17.06 | 22.92 |
CDX78095 | Canola | nucleus | 16.18 | 22.73 |
CDY59600 | Canola | nucleus | 16.18 | 22.54 |
CDY02191 | Canola | nucleus | 19.41 | 22.45 |
CDY07156 | Canola | nucleus | 18.24 | 22.22 |
CDX90142 | Canola | nucleus | 20.29 | 21.84 |
CDY35729 | Canola | nucleus | 19.12 | 21.74 |
CDY15678 | Canola | nucleus | 20.59 | 21.41 |
CDY35454 | Canola | nucleus | 21.47 | 21.34 |
CDX88742 | Canola | nucleus | 17.35 | 21.3 |
CDY72657 | Canola | nucleus | 18.24 | 21.23 |
CDY51722 | Canola | nucleus | 17.35 | 21.22 |
CDY66590 | Canola | nucleus | 20.29 | 21.1 |
CDY03494 | Canola | nucleus | 20.88 | 20.64 |
CDY71684 | Canola | nucleus | 20.29 | 20.6 |
CDY71763 | Canola | nucleus | 20.59 | 20.41 |
CDX92613 | Canola | nucleus | 20.59 | 20.41 |
CDX77184 | Canola | nucleus | 15.29 | 20.31 |
CDX80030 | Canola | nucleus | 21.18 | 19.78 |
CDY16754 | Canola | nucleus | 19.71 | 19.71 |
CDX87270 | Canola | nucleus | 19.71 | 19.65 |
CDY41539 | Canola | nucleus | 20.88 | 19.4 |
CDX86775 | Canola | nucleus | 17.65 | 19.29 |
CDY04620 | Canola | nucleus | 14.41 | 19.29 |
CDY64622 | Canola | nucleus | 18.24 | 19.2 |
CDX71704 | Canola | nucleus | 18.82 | 19.1 |
CDY08392 | Canola | nucleus | 18.82 | 18.93 |
CDY50231 | Canola | nucleus | 13.82 | 18.58 |
CDY00373 | Canola | nucleus | 14.12 | 18.46 |
CDX95706 | Canola | nucleus | 20.0 | 18.43 |
CDY27314 | Canola | nucleus | 19.41 | 18.33 |
CDY57876 | Canola | nucleus | 19.41 | 18.28 |
CDY61727 | Canola | nucleus | 20.0 | 18.18 |
CDX83357 | Canola | nucleus | 20.0 | 18.18 |
CDX89134 | Canola | extracellular, vacuole | 18.53 | 18.1 |
CDX84369 | Canola | nucleus | 19.71 | 18.06 |
CDY61064 | Canola | nucleus | 13.82 | 18.01 |
CDY00341 | Canola | nucleus | 19.41 | 17.93 |
CDY24798 | Canola | nucleus | 21.76 | 16.34 |
CDY08776 | Canola | nucleus | 2.94 | 11.63 |
Protein Annotations
MapMan:15.5.1.5 | GO:A0A078CKF0 | EnsemblPlants:CDX77212 | ProteinID:CDX77212 | ProteinID:CDX77212.1 | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00127875001 | InterPro:IPR003851 | PFAM:PD007478 |
PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF66 | UniParc:UPI0004EE7403 |
InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
BnaC04g40070D
Coordinates
chrLK031809:+:2144464..2146182
Molecular Weight (calculated)
36501.2 Da
IEP (calculated)
9.768
GRAVY (calculated)
-0.706
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFSSVSSFL DPPINWPQSA NSNNHPNHPH QLHPQETGNL VGGHRVHSHQ FPPQNPNPNH NHVDTTVDPA GLSGSVTERA RLAKNSHPPE GPLNCPRCNS
101: ANTKFCYFNN YNLTQPRHFC KACRRYWTQG GALRNVPVGG GCRRNKKAKP GNSKSSASSQ NKQSTSMVNA PSPTTNSNIQ LRTNSQLPFL PTLQNLTQLG
201: GIGLNLAAIN GNSVGNGNTS SSFFNDLGFF HGANTSGPVM ANNNNSESNI MTSLGSANHF AMLDRSMGLY SFPNEGNMVL SSSTASRVSQ TAPVKMEETH
301: VGSISRPDSG LSSAGNQSNQ YWPGLSLPGS SSNDQQQHLM
101: ANTKFCYFNN YNLTQPRHFC KACRRYWTQG GALRNVPVGG GCRRNKKAKP GNSKSSASSQ NKQSTSMVNA PSPTTNSNIQ LRTNSQLPFL PTLQNLTQLG
201: GIGLNLAAIN GNSVGNGNTS SSFFNDLGFF HGANTSGPVM ANNNNSESNI MTSLGSANHF AMLDRSMGLY SFPNEGNMVL SSSTASRVSQ TAPVKMEETH
301: VGSISRPDSG LSSAGNQSNQ YWPGLSLPGS SSNDQQQHLM
001: MVFSSVSSFL DPPINWPQSA NPNNHPHHHQ LQENGSLVSG HHQVLSHHFP QNPNPNHHHV ETAAATTVDP SSLNGQAAER ARLAKNSQPP EGALKCPRCD
101: SANTKFCYFN NYNLTQPRHF CKACRRYWTR GGALRNVPVG GGCRRNKKGK SGNSKSSSSS QNKQSTSMVN ATSPTNTSNV QLQTNSQFPF LPTLQNLTQL
201: GGIGLNLAAI NGNNGGNGNT SSSFLNDLGF FHGGNTSGPV MGNNNENNLM TSLGSSSHFA LFDRTMGLYN FPNEVNMGLS SIGATRVSQT AQVKMEDNHL
301: GNISRPVSGL TSPGNQSNQY WTGQGLPGSS SNDHHHQHLM
101: SANTKFCYFN NYNLTQPRHF CKACRRYWTR GGALRNVPVG GGCRRNKKGK SGNSKSSSSS QNKQSTSMVN ATSPTNTSNV QLQTNSQFPF LPTLQNLTQL
201: GGIGLNLAAI NGNNGGNGNT SSSFLNDLGF FHGGNTSGPV MGNNNENNLM TSLGSSSHFA LFDRTMGLYN FPNEVNMGLS SIGATRVSQT AQVKMEDNHL
301: GNISRPVSGL TSPGNQSNQY WTGQGLPGSS SNDHHHQHLM
Arabidopsis Description
DOF2.2Dof zinc finger protein DOF2.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV33]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.