Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31568 | Canola | nucleus | 96.89 | 96.51 |
| Bra002504.1-P | Field mustard | nucleus | 96.5 | 96.12 |
| CDY09221 | Canola | nucleus | 84.44 | 84.11 |
| CDX71050 | Canola | nucleus | 82.1 | 83.4 |
| AT5G60200.1 | Thale cress | nucleus | 80.16 | 80.16 |
| CDX88742 | Canola | nucleus | 81.32 | 75.45 |
| AT3G45610.1 | Thale cress | nucleus | 63.03 | 66.12 |
| CDY70840 | Canola | nucleus | 22.57 | 51.33 |
| CDY53379 | Canola | nucleus | 27.63 | 32.42 |
| CDY08775 | Canola | nucleus | 21.01 | 27.55 |
| CDX77184 | Canola | nucleus | 27.24 | 27.34 |
| CDY07781 | Canola | nucleus | 22.57 | 27.1 |
| CDY29082 | Canola | nucleus | 23.35 | 25.0 |
| CDX90602 | Canola | nucleus | 23.35 | 24.9 |
| CDY50231 | Canola | nucleus | 24.12 | 24.51 |
| CDY51722 | Canola | nucleus | 26.46 | 24.46 |
| CDY04620 | Canola | nucleus | 24.12 | 24.41 |
| CDX87189 | Canola | nucleus | 23.74 | 24.4 |
| CDY07156 | Canola | nucleus | 26.46 | 24.37 |
| CDX78095 | Canola | nucleus | 22.57 | 23.97 |
| CDY00373 | Canola | nucleus | 23.74 | 23.46 |
| CDY59600 | Canola | nucleus | 22.18 | 23.36 |
| CDY61064 | Canola | nucleus | 23.35 | 22.99 |
| CDY16836 | Canola | nucleus | 23.74 | 22.85 |
| KRH50082 | Soybean | nucleus | 24.12 | 21.53 |
| CDY02191 | Canola | nucleus | 24.12 | 21.09 |
| CDX86775 | Canola | nucleus | 25.29 | 20.9 |
| CDX71704 | Canola | nucleus | 27.24 | 20.9 |
| CDY40813 | Canola | nucleus | 22.96 | 20.85 |
| CDX79743 | Canola | nucleus | 23.74 | 20.82 |
| CDY41539 | Canola | nucleus | 29.57 | 20.77 |
| CDY64622 | Canola | nucleus | 26.07 | 20.74 |
| CDX93365 | Canola | nucleus | 24.9 | 20.71 |
| CDY08392 | Canola | nucleus | 27.24 | 20.71 |
| CDX80030 | Canola | nucleus | 29.18 | 20.6 |
| CDY70838 | Canola | nucleus | 24.51 | 20.59 |
| CDY72657 | Canola | nucleus | 23.35 | 20.55 |
| CDY33948 | Canola | nucleus | 24.12 | 20.53 |
| CDX84369 | Canola | nucleus | 29.57 | 20.49 |
| CDY35729 | Canola | nucleus | 23.74 | 20.4 |
| CDY37834 | Canola | nucleus | 24.12 | 20.39 |
| CDY65260 | Canola | nucleus | 24.51 | 20.39 |
| CDY00341 | Canola | nucleus | 29.18 | 20.38 |
| CDY71684 | Canola | nucleus | 26.46 | 20.3 |
| CDY16754 | Canola | nucleus | 26.85 | 20.29 |
| CDY42836 | Canola | nucleus | 22.57 | 20.28 |
| GSMUA_Achr1P17670_001 | Banana | nucleus | 17.12 | 20.28 |
| CDX87270 | Canola | nucleus | 26.85 | 20.23 |
| CDY70666 | Canola | nucleus | 23.35 | 20.2 |
| CDY69145 | Canola | nucleus, plastid | 24.51 | 20.0 |
| Zm00001d029512_P001 | Maize | nucleus | 27.24 | 19.94 |
| CDX73385 | Canola | nucleus | 23.35 | 19.87 |
| CDY72049 | Canola | nucleus | 22.96 | 19.87 |
| CDX92613 | Canola | nucleus | 26.46 | 19.83 |
| CDY71763 | Canola | nucleus | 26.46 | 19.83 |
| CDY40358 | Canola | nucleus | 25.68 | 19.82 |
| CDY03494 | Canola | nucleus | 26.46 | 19.77 |
| CDY70312 | Canola | nucleus | 21.79 | 19.72 |
| CDX91370 | Canola | nucleus | 24.9 | 19.69 |
| CDX74947 | Canola | nucleus | 24.9 | 19.69 |
| VIT_00s0652g00010.t01 | Wine grape | nucleus | 22.57 | 19.66 |
| CDX95706 | Canola | nucleus | 28.02 | 19.51 |
| CDY57876 | Canola | nucleus | 27.24 | 19.39 |
| CDX90142 | Canola | nucleus | 23.74 | 19.3 |
| CDY35454 | Canola | nucleus | 25.68 | 19.3 |
| CDX89134 | Canola | extracellular, vacuole | 26.07 | 19.25 |
| CDX83357 | Canola | nucleus | 28.02 | 19.25 |
| CDY61727 | Canola | nucleus | 27.24 | 18.72 |
| CDY70704 | Canola | nucleus | 26.46 | 18.63 |
| CDY27314 | Canola | nucleus | 26.07 | 18.61 |
| KRH20417 | Soybean | nucleus | 23.74 | 18.6 |
| CDY66590 | Canola | nucleus | 23.35 | 18.35 |
| CDY15624 | Canola | nucleus | 23.74 | 18.26 |
| CDX81292 | Canola | nucleus | 19.84 | 18.09 |
| CDY15678 | Canola | nucleus | 22.96 | 18.04 |
| GSMUA_Achr5P12010_001 | Banana | nucleus | 24.9 | 18.03 |
| CDX77212 | Canola | nucleus | 23.35 | 17.65 |
| Solyc02g078620.1.1 | Tomato | nucleus | 19.46 | 17.61 |
| CDY31735 | Canola | nucleus | 23.35 | 17.44 |
| CDY40213 | Canola | nucleus | 23.74 | 17.18 |
| CDX76102 | Canola | nucleus | 25.29 | 17.06 |
| CDX95139 | Canola | nucleus | 22.18 | 16.96 |
| CDY61965 | Canola | nucleus | 19.84 | 16.4 |
| CDY55422 | Canola | nucleus | 25.29 | 16.21 |
| CDY55549 | Canola | nucleus | 25.29 | 16.17 |
| CDX80822 | Canola | nucleus | 25.29 | 16.01 |
| CDY04855 | Canola | nucleus | 24.9 | 15.76 |
| CDY06274 | Canola | nucleus | 19.07 | 15.61 |
| CDY24798 | Canola | nucleus | 25.29 | 14.35 |
| CDY08776 | Canola | nucleus | 3.11 | 9.3 |
| Os03t0276300-00 | Rice | cytosol | 1.56 | 2.88 |
Protein Annotations
| MapMan:15.5.1.5 | GO:A0A078CSP7 | EnsemblPlants:CDX80191 | ProteinID:CDX80191 | ProteinID:CDX80191.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00133129001 | InterPro:IPR003851 | PFAM:PD007478 |
| PFAM:PF02701 | ScanProsite:PS01361 | PFscan:PS50884 | PANTHER:PTHR31992 | PANTHER:PTHR31992:SF78 | UniParc:UPI0004EF05AF |
| InterPro:Znf_Dof | SEG:seg | : | : | : | : |
Description
BnaC09g35510D
Coordinates
chrLK031820:-:376947..378050
Molecular Weight (calculated)
28010.7 Da
IEP (calculated)
8.993
GRAVY (calculated)
-0.716
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHLLQHQDM FGNYNKARDA MGVSSSPNPT EVDHNQKKPS LATGAAKPQP PDLALRCPRC DSTNTKFCYY NNYSLSQPRY FCKSCRRYWT KGGTLRNIPV
101: GGGCRKNKRS TSSATRSLRT TPEPAFSAAS FGGFGNNEHT DLRLAFALLN KQPQGSSSHI GFPSAFGNSN SHQSDMESVF GTSQKNENAG YAFGNGSSGL
201: DMAMSDPNKV LWGFPWQMNA EGFGMMNMGG GGGHVDQVDS GRELWTNMNY INSGALM
101: GGGCRKNKRS TSSATRSLRT TPEPAFSAAS FGGFGNNEHT DLRLAFALLN KQPQGSSSHI GFPSAFGNSN SHQSDMESVF GTSQKNENAG YAFGNGSSGL
201: DMAMSDPNKV LWGFPWQMNA EGFGMMNMGG GGGHVDQVDS GRELWTNMNY INSGALM
001: MDHLLQHQDV FGNYNKAREA MGLSYSSNPT PLDNDQKKPS PATAVTRPQP PELALRCPRC DSTNTKFCYY NNYSLTQPRY FCKSCRRYWT KGGTLRNIPV
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
101: GGGCRKNKRS TSSAARSLRT TPEPASHDGK VFSAAGFNGY SNNEHIDLSL AFALLNKQHP GSSSQLGFHS ELGSSHQSDM EGMFGTSQQK ENATYAFGNG
201: SSGLGDPSRV LWGFPWQMNG ESFGMMNIGG GGGHVDQIDS GREMWTNMNY INSGALM
Arabidopsis Description
DOF5.3Dof zinc finger protein DOF5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q84TE9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.