CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH11775
KRH25015
KRH29910
KRH36781
KRH43001
KRH59117

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G45610.1	KRH25015	AT5G60690.1	21245844
AT3G45610.1	KRH29910	AT5G60690.1	21245844
AT5G60200.1	KRH11775	AT2G34710.1	21245844
AT5G60200.1	KRH36781	AT2G34710.1	21245844
AT5G60200.1	KRH43001	AT2G34710.1	21245844
AT5G60200.1	KRH59117	AT2G34710.1	21245844
AT5G60200.1	KRH25015	AT5G60690.1	21245844
AT5G60200.1	KRH29910	AT5G60690.1	21245844

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50082	Soybean	nucleus	73.48	83.68
KRH53547	Soybean	nucleus	19.21	30.58
KRH21403	Soybean	nucleus	28.05	29.02
KRH10904	Soybean	nucleus	27.44	28.75
KRG96269	Soybean	nucleus	14.33	27.33
Bra020261.1-P	Field mustard	nucleus	18.9	26.05
KRG97209	Soybean	nucleus	19.82	25.79
KRH22943	Soybean	nucleus	22.26	25.61
KRH24943	Soybean	nucleus	23.78	25.57
KRG92523	Soybean	nucleus	23.48	25.5
PGSC0003DMT400058729	Potato	nucleus	15.24	25.38
CDX71050	Canola	nucleus	19.51	25.3
KRH10402	Soybean	nucleus	21.95	25.26
AT3G45610.1	Thale cress	nucleus	18.6	24.9
KRG89059	Soybean	nucleus	23.17	24.52
AT5G60200.1	Thale cress	nucleus	19.21	24.51
CDY31568	Canola	nucleus	19.21	24.42
CDY09221	Canola	nucleus	19.21	24.42
KRH23056	Soybean	nucleus	19.82	24.16
KRH21495	Soybean	nucleus	20.43	24.1
Bra002504.1-P	Field mustard	nucleus	18.9	24.03
KRH10276	Soybean	nucleus	22.26	24.01
KRH06442	Soybean	nucleus	20.12	23.91
CDX80191	Canola	nucleus	18.6	23.74
KRH64383	Soybean	nucleus	21.34	23.57
KRH10827	Soybean	nucleus	20.43	23.51
CDX88742	Canola	nucleus	19.82	23.47
KRH24808	Soybean	nucleus	21.95	23.45
KRH20416	Soybean	nucleus	25.0	23.23
KRH68931	Soybean	nucleus	20.73	23.21
Bra006675.1-P	Field mustard	nucleus	19.51	23.1
KRH47883	Soybean	nucleus	20.12	23.0
KRH50083	Soybean	nucleus	24.39	22.99
KRH34272	Soybean	nucleus	23.48	22.92
KRH56758	Soybean	nucleus	20.12	22.6
KRH03180	Soybean	nucleus	20.12	22.0
KRH70477	Soybean	nucleus	24.7	21.83
KRH54755	Soybean	nucleus	20.12	21.78
KRG96256	Soybean	nucleus	17.99	21.77
KRH50000	Soybean	nucleus	21.65	21.39
KRH21402	Soybean	nucleus	23.17	21.29
KRH10907	Soybean	nucleus	22.87	21.25
KRH72174	Soybean	nucleus	18.9	21.23
KRH29808	Soybean	nucleus, plastid	21.34	20.9
KRH20497	Soybean	nucleus	21.34	20.83
KRH76935	Soybean	nucleus	21.34	20.83
KRH74458	Soybean	nucleus	21.34	20.77
KRH39485	Soybean	nucleus	21.65	20.76
KRH28526	Soybean	nucleus	21.34	20.65
KRH46814	Soybean	nucleus	22.87	20.44
KRG99864	Soybean	nucleus	22.26	20.11
KRH53419	Soybean	nucleus	17.38	19.72
KRH63537	Soybean	nucleus	20.43	19.48
KRH03289	Soybean	nucleus	19.51	19.39
KRH32857	Soybean	extracellular, vacuole	19.82	19.35
KRH57071	Soybean	nucleus	19.21	19.09
KRH64521	Soybean	nucleus	16.77	19.03
KRH01640	Soybean	nucleus	21.04	19.01
KRH54395	Soybean	nucleus	20.43	18.98
KRH63162	Soybean	nucleus	19.51	18.77
Zm00001d029512_P001	Maize	nucleus	19.82	18.52
KRH04709	Soybean	nucleus	18.6	17.33
KRG99513	Soybean	nucleus	18.29	16.26
KRH45516	Soybean	nucleus	19.21	15.63
TraesCS1B01G185700.1	Wheat	cytosol	6.1	9.22
TraesCS6A01G233700.1	Wheat	cytosol, mitochondrion, nucleus	6.1	9.22
HORVU2Hr1G047750.4	Barley	plastid	3.66	5.31
Os03t0276300-00	Rice	cytosol	2.13	5.04

Protein Annotations

MapMan:15.5.1.5	UniProt:A0A0R0GQ42	EMBL:ACUP02008264	EnsemblPlantsGene:GLYMA_13G177600	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003851	EnsemblPlants:KRH20417	ProteinID:KRH20417	ProteinID:KRH20417.1	PFAM:PD007478	PFAM:PF02701
ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF64	UniParc:UPI0006ED693C	InterPro:Znf_Dof
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:29166705..29167801

Molecular Weight (calculated)

35935.6 Da

IEP (calculated)

10.323

GRAVY (calculated)

-0.899

Length

328 amino acids

Sequence
(BLAST)

001: MIKKTNTHYT KFRSQRDKDM EQEGEKGREE KRQIQQQQPP PQQHQKCPRC DSMNTKFCYF NNYSLSQPRH FCKACKRYWT LGGTFRNIPV GGGSRKVKRG
101: KTNSPSSSSS SSSSCSNLLS QPQQNLLMRP SPPPLTTNTM VQSTSPYYYN LGVGGNGYLS FHSSLNNNTP SQPSDQYLKV GGGDHVAGSS NISPLVSGFN
201: NAASYSLPPR FHHQQQQQSM HPAQQQQQRL INIPSNMASS SSDVSHSGVR PQSLINNVST STDHNVSTST NHRAITTSDA SLWSAATINA TSIGGNSDQN
301: NVVKGSSSSS SSLVPNLWVH RPGFGPPQ

Best Arabidopsis Sequence Match ( AT1G51700.1 )
(BLAST)

001: MQDLTSAAAY YHQSMMMTTA KQNQPELPEQ EQLKCPRCDS PNTKFCYYNN YNLSQPRHFC KNCRRYWTKG GALRNIPVGG GTRKSNKRSG SSPSSNLKNQ
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN

Arabidopsis Description

DOF1.7Dof zinc finger protein DOF1.7 [Source:UniProtKB/Swiss-Prot;Acc:O82155]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.