CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29910	Soybean	cytosol, nucleus, plastid	95.48	95.37
VIT_06s0004g02800.t01	Wine grape	nucleus	87.04	86.73
AT5G60690.1	Thale cress	cytosol, nucleus, plastid	81.93	81.83
CDY52706	Canola	cytosol, nucleus, plastid	82.05	81.46
Bra002458.1-P	Field mustard	cytosol, nucleus, plastid	81.81	80.94
CDY31519	Canola	cytosol, nucleus, plastid	81.81	80.94
Solyc11g069470.1.1	Tomato	cytosol, nucleus, plastid	80.86	80.86
PGSC0003DMT400020801	Potato	cytosol, nucleus, plastid	80.26	80.26
Bra020236.1-P	Field mustard	nucleus	79.67	79.2
CDY09191	Canola	cytosol	69.92	78.93
Bra038295.1-P	Field mustard	cytosol, nucleus, plastid	76.58	77.31
CDX99164	Canola	cytosol, nucleus, plastid	76.93	77.12
HORVU5Hr1G061410.29	Barley	cytosol	25.33	73.7
CDY31032	Canola	cytosol	66.59	73.11
GSMUA_Achr5P18530_001	Banana	cytosol, nucleus, plastid	71.34	71.94
Os10t0480200-01	Rice	nucleus	71.58	71.67
CDY31031	Canola	extracellular	9.04	71.03
OQU93425	Sorghum	nucleus	70.87	70.78
HORVU1Hr1G041790.2	Barley	nucleus	70.63	70.71
Os03t0109400-02	Rice	nucleus	70.51	70.68
EER94065	Sorghum	nucleus	70.27	70.53
Zm00001d048527_P028	Maize	nucleus	70.87	70.45
TraesCS1B01G173900.1	Wheat	nucleus	70.27	70.36
TraesCS1A01G157500.1	Wheat	nucleus	70.27	70.36
KRH11775	Soybean	cytosol, nucleus, plastid	70.75	70.33
TraesCS1D01G155200.3	Wheat	nucleus	69.68	69.93
KRH36781	Soybean	cytosol, nucleus, plastid	70.63	69.72
Zm00001d027317_P015	Maize	nucleus	70.63	69.64
TraesCS4B01G385200.1	Wheat	nucleus	69.32	69.49
HORVU4Hr1G090030.9	Barley	nucleus	68.97	69.21
TraesCS5A01G549700.1	Wheat	nucleus	68.85	69.09
KRH43001	Soybean	cytosol	69.68	69.02
TraesCS4D01G359600.1	Wheat	nucleus	68.73	68.97
KRH59117	Soybean	cytosol	69.68	68.7
KRH52763	Soybean	cytosol	65.28	64.97
KRH62081	Soybean	cytosol	65.16	64.93
Zm00001d032681_P004	Maize	cytosol, nucleus, plastid	67.3	64.91
KRH47223	Soybean	nucleus	64.33	64.56
KRH44288	Soybean	nucleus	64.21	64.44
CDY27014	Canola	cytosol, plasma membrane	5.71	64.0
KRH47225	Soybean	cytosol	63.85	63.85
KRH58026	Soybean	cytosol	17.84	63.83
CDY57624	Canola	extracellular	6.9	62.37
KRH44292	Soybean	cytosol	62.78	62.12
KRH33388	Soybean	cytosol	6.3	50.96
CDX82038	Canola	extracellular	9.27	48.15
Zm00001d049529_P001	Maize	cytosol, plastid	10.82	47.89
Os03t0769800-01	Rice	plastid	4.52	15.7
Os10t0147300-02	Rice	plastid	0.83	6.42

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100813804	MapMan:15.5.3.2	Gene3D:3.30.530.20	EMBL:ACUP02007196	ncoils:Coil
EnsemblPlantsGene:GLYMA_12G075800	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008289	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom
UniProt:I1LR38	InterPro:IPR001356	InterPro:IPR002913	InterPro:IPR023393	EnsemblPlants:KRH25015	ProteinID:KRH25015
ProteinID:KRH25015.1	InterPro:MEKHLA	PFAM:PF00046	PFAM:PF01852	PFAM:PF08670	PFscan:PS50071
PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF279	SMART:SM00234	SMART:SM00389	SUPFAM:SSF46689
SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI00023D184F	:	:

Description

hypothetical protein

Coordinates

chr12:+:5813285..5820142

Molecular Weight (calculated)

92018.0 Da

IEP (calculated)

6.001

GRAVY (calculated)

-0.087

Length

841 amino acids

Sequence
(BLAST)

001: MAMAVAQHRE SSSSGSIDKH LDSGKYVRYT AEQVEALERV YAECPKPSSL RRQQLIRECP ILSNIEPKQI KVWFQNRRCR EKQRKEASRL QTVNRKLTAM
101: NKLLMEENDR LQKQVSQLVC ENGFMRQQLH TPSAATTDAS CDSVVTTPQH TMRDANNPAG LLSIAEETLT EFLSKATGTA VDWVQMPGMK PGPDSVGIFA
201: ISQSCSGVAA RACGLVSLEP TKIAEILKDR PSWFRDCRSL EVFTMFPAGN GGTIELVYTQ TYAPTTLAPA RDFWTLRYTT SLENGSLVVC ERSLSGSGTG
301: PNPAAAAQFV RAETLPSGYL IRPCEGGGSI IHIVDHLNLE AWSVPEVLRP LYESSKVVAQ KMTIAALRYI RQIAQETSGE VVYGLGRQPA VLRTFSQRLS
401: RGFNDAVNGF NDDGWTVLNC DGAEDVFIAV NSTKNLSGTS NPASSLTFLG GILCAKASML LQNVPPAVLV RFLREHRSEW ADFSVDAYSA ASLKAGTYAY
501: PGMRPTRFTG SQIIMPLGHT IEHEEMLEVI RLEGHSLAQE DAFVSRDIHL LQICSGIDEN AVGACSELVF APIDEMFPDD APLIPSGFRI IPLDSKPGDK
601: KEVATNRTLD LTSGFEVGPA TTAGTDASSS QNTRSVLTIA FQFPFDSSLQ DNVAVMARQY VRSVISSVQR VAMAISPSGI SPSVGAKLSP GSPEAVTLAH
701: WICQSYSYYI GSDLLRSDSL VGDMMLKQLW HHQDAILCCS LKPLPVFIFA NQAGLDMLET TLVALQDITL DKIFDEAGRK ALCTDFAKLM EQGFAYLPAG
801: ICMSTMGRHV SYDQAIAWKV LTGEDNTVHC LAFSFINWSF V

Best Arabidopsis Sequence Match ( AT5G60690.1 )
(BLAST)

001: MEMAVANHRE RSSDSMNRHL DSSGKYVRYT AEQVEALERV YAECPKPSSL RRQQLIRECS ILANIEPKQI KVWFQNRRCR DKQRKEASRL QSVNRKLSAM
101: NKLLMEENDR LQKQVSQLVC ENGYMKQQLT TVVNDPSCES VVTTPQHSLR DANSPAGLLS IAEETLAEFL SKATGTAVDW VQMPGMKPGP DSVGIFAISQ
201: RCNGVAARAC GLVSLEPMKI AEILKDRPSW FRDCRSLEVF TMFPAGNGGT IELVYMQTYA PTTLAPARDF WTLRYTTSLD NGSFVVCERS LSGSGAGPNA
301: ASASQFVRAE MLSSGYLIRP CDGGGSIIHI VDHLNLEAWS VPDVLRPLYE SSKVVAQKMT ISALRYIRQL AQESNGEVVY GLGRQPAVLR TFSQRLSRGF
401: NDAVNGFGDD GWSTMHCDGA EDIIVAINST KHLNNISNSL SFLGGVLCAK ASMLLQNVPP AVLIRFLREH RSEWADFNVD AYSAATLKAG SFAYPGMRPT
501: RFTGSQIIMP LGHTIEHEEM LEVVRLEGHS LAQEDAFMSR DVHLLQICTG IDENAVGACS ELIFAPINEM FPDDAPLVPS GFRVIPVDAK TGDVQDLLTA
601: NHRTLDLTSS LEVGPSPENA SGNSFSSSSS RCILTIAFQF PFENNLQENV AGMACQYVRS VISSVQRVAM AISPSGISPS LGSKLSPGSP EAVTLAQWIS
701: QSYSHHLGSE LLTIDSLGSD DSVLKLLWDH QDAILCCSLK PQPVFMFANQ AGLDMLETTL VALQDITLEK IFDESGRKAI CSDFAKLMQQ GFACLPSGIC
801: VSTMGRHVSY EQAVAWKVFA ASEENNNNLH CLAFSFVNWS FV

Arabidopsis Description

REVHomeobox-leucine zipper protein REVOLUTA [Source:UniProtKB/Swiss-Prot;Acc:Q9SE43]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.