CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47223	Soybean	nucleus	97.02	97.02
KRH47225	Soybean	cytosol	96.3	95.96
KRH44292	Soybean	cytosol	93.91	92.59
KRH58026	Soybean	cytosol	25.78	91.91
VIT_09s0002g03740.t01	Wine grape	cytosol	88.31	87.99
PGSC0003DMT400006735	Potato	cytosol	84.73	85.03
Solyc03g120910.2.1	Tomato	cytosol	84.61	84.81
AT1G52150.2	Thale cress	cytosol	84.61	84.71
CDY02553	Canola	cytosol	84.25	84.55
CDY60592	Canola	cytosol	84.49	84.49
Bra014315.1-P	Field mustard	cytosol	83.89	84.29
CDY47819	Canola	cytosol	84.13	84.13
Bra018948.1-P	Field mustard	cytosol	84.13	84.13
Solyc12g044410.1.1	Tomato	nucleus	82.34	82.44
PGSC0003DMT400068037	Potato	cytosol	82.22	82.32
CDY51188	Canola	nucleus	70.29	81.69
KRH62081	Soybean	cytosol	79.59	79.03
KRH52763	Soybean	cytosol	79.59	78.93
KRH36781	Soybean	cytosol, nucleus, plastid	67.54	66.43
KRH11775	Soybean	cytosol, nucleus, plastid	66.95	66.31
KRH29910	Soybean	cytosol, nucleus, plastid	64.92	64.61
KRH25015	Soybean	cytosol, nucleus, plastid	64.44	64.21
Bra030088.1-P	Field mustard	mitochondrion	9.31	63.93
KRH59117	Soybean	cytosol	64.32	63.19
KRH43001	Soybean	cytosol	63.72	62.9
KRH33388	Soybean	cytosol	5.25	42.31

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100800165	MapMan:15.5.3.2	Gene3D:3.30.530.20	EMBL:ACUP02004926	ncoils:Coil
EnsemblPlantsGene:GLYMA_08G201900	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008289	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom
UniProt:I1KV32	InterPro:IPR001356	InterPro:IPR002913	InterPro:IPR023393	EnsemblPlants:KRH44288	ProteinID:KRH44288
ProteinID:KRH44288.1	InterPro:MEKHLA	PFAM:PF00046	PFAM:PF01852	PFAM:PF08670	PFscan:PS50071
PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF217	SMART:SM00234	SMART:SM00389	SUPFAM:SSF46689
SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI0002338C94	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:-:16362660..16370690

Molecular Weight (calculated)

92391.8 Da

IEP (calculated)

6.469

GRAVY (calculated)

-0.141

Length

838 amino acids

Sequence
(BLAST)

001: MSCKDGSRNG IGMDNGKYVR YTPEQVEALE RLYHDCPKPS SIRRQQLIRE CPILSNIEPK QIKVWFQNRR CREKQRKESS RLQAVNRKLT AMNKLLMEEN
101: DRLQKQVSQL VYENGYFRQH TQITTQATKD TNCESVVTSG QHNLTTQHPP RDASPAGLLS IAEETLAEFL SKATGTAVEW VQMPGMKPGP DSIGIVAISH
201: GCTGVAARAC GLVGLEPTRV AEILKDRPLW FRDCRAVDVL NVLPTANGGT IELLYMQLYA PTTLAPARDF WLLRYTSVLE DGSLVICERS LKNTQNGPSM
301: PPVQHFVRAE MLPSGYLIRP CEGGGSIIHI VDHMDLEPWS VPEVLRPLYE SSTVLAQKTT MAALRHLRQI SHEVSQSNVT GWGRRPAALR ALSQRLSRGF
401: NEALNGFTDE GWTTISNDGV DDVTILVNSS PDKLMGLNLS FANGFPSVSN AVLCAKASML LQNVPPAILL RFLREHRSEW ADNNMDAYTA AAIKVGPCSL
501: SGSCVGNFGG QVILPLAHTI EHEEFLEVIK LEGIAHSPED TIMPREMFLL QLCSGMDENA VGTCAELISA PIDASFADDA PLLPSGFRII PLESGKEASS
601: PNRTLDLASS LDVGPSGNRA SNGSAGNSSC MRSVMTIAFE FAFESHMQEH VTSMARQYVR SIISSVQRVA LALSPSHLSS HAGLRSPLGT PEAQTLAHWI
701: CNSYRCYLGV ELLKSNNEGN ESLLKSLWHH SDAILCCTLK ALPVFTFSNQ AGLDMLETTL VALQDITLEK IFDDHGRKIL FSEFPQIIQQ GFACLQGGIC
801: LSSMGRPVSY ERVVAWKVLN EEENAHCICF MFVNWSFV

Best Arabidopsis Sequence Match ( AT1G52150.1 )
(BLAST)

001: MAMSCKDGKL GCLDNGKYVR YTPEQVEALE RLYHDCPKPS SIRRQQLIRE CPILSNIEPK QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN
101: DRLQKQVSQL VHENSYFRQH TPNPSLPAKD TSCESVVTSG QHQLASQNPQ RDASPAGLLS IAEETLAEFL SKATGTAVEW VQMPGMKPGP DSIGIIAISH
201: GCTGVAARAC GLVGLEPTRV AEIVKDRPSW FRECRAVEVM NVLPTANGGT VELLYMQLYA PTTLAPPRDF WLLRYTSVLE DGSLVVCERS LKSTQNGPSM
301: PLVQNFVRAE MLSSGYLIRP CDGGGSIIHI VDHMDLEACS VPEVLRPLYE SPKVLAQKTT MAALRQLKQI AQEVTQTNSS VNGWGRRPAA LRALSQRLSR
401: GFNEAVNGFT DEGWSVIGDS MDDVTITVNS SPDKLMGLNL TFANGFAPVS NVVLCAKASM LLQNVPPAIL LRFLREHRSE WADNNIDAYL AAAVKVGPCS
501: ARVGGFGGQV ILPLAHTIEH EEFMEVIKLE GLGHSPEDAI VPRDIFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL DSAKEVSSPN
601: RTLDLASALE IGSAGTKAST DQSGNSTCAR SVMTIAFEFG IESHMQEHVA SMARQYVRGI ISSVQRVALA LSPSHISSQV GLRTPLGTPE AQTLARWICQ
701: SYRGYMGVEL LKSNSDGNES ILKNLWHHTD AIICCSMKAL PVFTFANQAG LDMLETTLVA LQDISLEKIF DDNGRKTLCS EFPQIMQQGF ACLQGGICLS
801: SMGRPVSYER AVAWKVLNEE ENAHCICFVF INWSFV

Arabidopsis Description

ATHB-15Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Source:UniProtKB/TrEMBL;Acc:B3H4G8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.