Factsheet for Bra014315.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02553	Canola	cytosol	98.8	98.68
Bra018948.1-P	Field mustard	cytosol	96.16	95.7
AT1G52150.2	Thale cress	cytosol	94.96	94.62
VIT_09s0002g03740.t01	Wine grape	cytosol	85.37	84.66
KRH47223	Soybean	nucleus	84.77	84.37
KRH44288	Soybean	nucleus	84.29	83.89
KRH47225	Soybean	cytosol	83.57	82.88
Solyc03g120910.2.1	Tomato	cytosol	82.97	82.78
PGSC0003DMT400006735	Potato	cytosol	82.61	82.52
KRH44292	Soybean	cytosol	82.13	80.59
PGSC0003DMT400068037	Potato	cytosol	80.82	80.53
Solyc12g044410.1.1	Tomato	nucleus	80.34	80.05
KRH58026	Soybean	cytosol	22.54	80.0
Bra011392.1-P	Field mustard	cytosol	75.18	75.27
Bra034539.1-P	Field mustard	nucleus	74.58	74.76
GSMUA_Achr8P20090_001	Banana	cytosol	73.62	73.27
GSMUA_Achr5P06550_001	Banana	cytosol	73.5	73.06
Bra030088.1-P	Field mustard	mitochondrion	10.67	72.95
EES00115	Sorghum	cytosol, nucleus, plastid	66.67	65.88
HORVU3Hr1G026990.3	Barley	cytosol, nucleus, plastid	65.71	64.85
Os06t0720500-01	Rice	extracellular, mitochondrion, plastid	11.99	64.52
Os06t0722300-01	Rice	extracellular, mitochondrion, plastid	11.99	64.52
Os06t0722650-01	Rice	extracellular, mitochondrion, plastid	11.99	64.52
Zm00001d008869_P001	Maize	cytosol	66.07	64.22
Bra021926.1-P	Field mustard	cytosol	64.03	63.35
TraesCS3A01G312800.1	Wheat	nucleus	65.47	62.47
Bra005398.1-P	Field mustard	cytosol	63.55	62.43
TraesCS3B01G159100.2	Wheat	cytosol, nucleus, plastid	65.23	62.1
TraesCS3D01G141500.2	Wheat	nucleus	65.59	62.02
Bra032394.1-P	Field mustard	cytosol, nucleus, plastid	62.35	61.9
Bra002458.1-P	Field mustard	cytosol, nucleus, plastid	62.95	61.76
Bra020236.1-P	Field mustard	nucleus	61.99	61.11
Bra038295.1-P	Field mustard	cytosol, nucleus, plastid	59.23	59.3
Os01t0200300-01	Rice	cytosol, peroxisome	29.62	57.31
Zm00001d014252_P002	Maize	cytosol	9.23	44.25

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.2	Gene3D:3.30.530.20	EnsemblPlantsGene:Bra014315	EnsemblPlants:Bra014315.1	EnsemblPlants:Bra014315.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008289	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom
InterPro:IPR001356	InterPro:IPR002913	InterPro:IPR023393	UniProt:M4DCU8	InterPro:MEKHLA	PFAM:PF00046
PFAM:PF01852	PFAM:PF08670	PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF217
SMART:SM00234	SMART:SM00389	SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom
UniParc:UPI0002545BE7	:	:	:	:	:

Description

AT1G52150 (E=0.0) ATHB-15, ATHB15, CNA, ICU4 | ATHB-15; DNA binding / transcription factor

Coordinates

chrA08:+:1692496..1696182

Molecular Weight (calculated)

91616.3 Da

IEP (calculated)

6.276

GRAVY (calculated)

-0.115

Length

834 amino acids

Sequence
(BLAST)

001: MAMSYKDGKM GCMDNGKYVR YTPEQVEALE RLYHDCPKPS SIRRQQLIRE CPILSNIEPK QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN
101: DRLQKQVSQL VHENSYFRQH TPNPTLPAKD TSCESVVTSG QHQLASQNPP RDASPAGLLS IAEETLAEFI SKATGTAVEW VQMPGMKPGP DSIGIIAISH
201: GCAGVAARAC GLVGLEPTRV AEIVKDRPSW FRECRAVDVM NVLPTANGGT IELLYMQLYA PTTLAPPRDF WLLRYTSVLE DGSLVVCERS LKCGPSMPPV
301: QHFVRAEMLP SGYLIRPCDG GGSIIHIVDH MDLEACSVPE VLRPLYESPK VLAQKTTMAA LRQLKQIAQE SSQTNSSVNG WGRRPAALRA LSQRLSRGFN
401: EAVNGFTDEG WSVIGDSMDD VTITVNSSPD KLMGLNLTFS NGFAPVSNVV LCAKASMLLQ NVPPAILLRF LREHRSEWAD NNIDAYLAAA VKVGPCSARV
501: GGFGGQVILP LAHTIEHEEF MEVIKLEGLG QSPEDAIVPR DIFLLQLCSG MDENALGTCA ELIFAPIDAS FADDAPLLPS GFRIIPLDST KEASSPNRTL
601: DLASALEIGP AGTTKASTDQ SGNSTCARSV MTIAFEFGIE SHMQEHVASM ARNYVRGIIA SVQRVALALS PSHISSQVGL RTPLGTPEAQ TLARWICQSY
701: RCYMGVELLN LNSEGNESIL KNLWHHTDAI ICCSMKAMPV FTFANQAGLD MLETTLVSLQ DITLEKIFDD SGRKTLCSEF PQIMQQGFGS LQGGICISSM
801: GRPVSYERAV AWKVLNEEEN THCICFVFIN WSFV

Best Arabidopsis Sequence Match ( AT1G52150.1 )
(BLAST)

001: MAMSCKDGKL GCLDNGKYVR YTPEQVEALE RLYHDCPKPS SIRRQQLIRE CPILSNIEPK QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN
101: DRLQKQVSQL VHENSYFRQH TPNPSLPAKD TSCESVVTSG QHQLASQNPQ RDASPAGLLS IAEETLAEFL SKATGTAVEW VQMPGMKPGP DSIGIIAISH
201: GCTGVAARAC GLVGLEPTRV AEIVKDRPSW FRECRAVEVM NVLPTANGGT VELLYMQLYA PTTLAPPRDF WLLRYTSVLE DGSLVVCERS LKSTQNGPSM
301: PLVQNFVRAE MLSSGYLIRP CDGGGSIIHI VDHMDLEACS VPEVLRPLYE SPKVLAQKTT MAALRQLKQI AQEVTQTNSS VNGWGRRPAA LRALSQRLSR
401: GFNEAVNGFT DEGWSVIGDS MDDVTITVNS SPDKLMGLNL TFANGFAPVS NVVLCAKASM LLQNVPPAIL LRFLREHRSE WADNNIDAYL AAAVKVGPCS
501: ARVGGFGGQV ILPLAHTIEH EEFMEVIKLE GLGHSPEDAI VPRDIFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL DSAKEVSSPN
601: RTLDLASALE IGSAGTKAST DQSGNSTCAR SVMTIAFEFG IESHMQEHVA SMARQYVRGI ISSVQRVALA LSPSHISSQV GLRTPLGTPE AQTLARWICQ
701: SYRGYMGVEL LKSNSDGNES ILKNLWHHTD AIICCSMKAL PVFTFANQAG LDMLETTLVA LQDISLEKIF DDNGRKTLCS EFPQIMQQGF ACLQGGICLS
801: SMGRPVSYER AVAWKVLNEE ENAHCICFVF INWSFV

Arabidopsis Description

ATHB-15Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Source:UniProtKB/TrEMBL;Acc:B3H4G8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.