Factsheet for HORVU3Hr1G026990.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G109740.2
HORVU2Hr1G109820.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32880.1	HORVU2Hr1G109740.2	AT3G51180.1	21798944
AT4G32880.1	HORVU2Hr1G109820.1	AT3G51180.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G141500.2	Wheat	nucleus	93.49	89.57
TraesCS3B01G159100.2	Wheat	cytosol, nucleus, plastid	92.66	89.38
TraesCS3A01G312800.1	Wheat	nucleus	91.24	88.22
EES00115	Sorghum	cytosol, nucleus, plastid	83.31	83.41
Os06t0722650-01	Rice	extracellular, mitochondrion, plastid	14.91	81.29
Os06t0722300-01	Rice	extracellular, mitochondrion, plastid	14.91	81.29
Os06t0720500-01	Rice	extracellular, mitochondrion, plastid	14.91	81.29
Zm00001d008869_P001	Maize	cytosol	80.0	78.79
Os01t0200300-01	Rice	cytosol, peroxisome	38.46	75.41
PGSC0003DMT400074932	Potato	nucleus	43.91	70.27
GSMUA_Achr5P06550_001	Banana	cytosol	67.57	68.06
Solyc08g066500.2.1	Tomato	cytosol	66.27	67.71
PGSC0003DMT400006735	Potato	cytosol	66.63	67.43
Solyc03g120910.2.1	Tomato	cytosol	66.63	67.34
VIT_09s0002g03740.t01	Wine grape	cytosol	66.86	67.18
GSMUA_Achr8P20090_001	Banana	cytosol	66.39	66.95
VIT_04s0008g03250.t01	Wine grape	cytosol	67.1	66.71
CDY69514	Canola	nucleus	49.59	66.51
HORVU5Hr1G061410.29	Barley	cytosol	22.72	66.44
PGSC0003DMT400074934	Potato	cytosol	65.56	66.03
CDY60592	Canola	cytosol	65.44	65.99
CDY02553	Canola	cytosol	65.21	65.99
AT1G52150.2	Thale cress	cytosol	65.33	65.95
CDY51188	Canola	nucleus	56.09	65.74
Bra014315.1-P	Field mustard	cytosol	64.85	65.71
CDY47819	Canola	cytosol	65.09	65.63
Bra018948.1-P	Field mustard	cytosol	65.09	65.63
Solyc12g044410.1.1	Tomato	nucleus	64.97	65.59
PGSC0003DMT400068037	Potato	cytosol	64.97	65.59
CDY45021	Canola	nucleus	57.04	65.31
CDY28273	Canola	nucleus	56.8	65.04
Bra034539.1-P	Field mustard	nucleus	63.31	64.3
Bra011392.1-P	Field mustard	cytosol	63.31	64.23
AT4G32880.1	Thale cress	nucleus	63.2	64.11
CDX68901	Canola	plastid	13.96	58.42
HORVU1Hr1G041790.2	Barley	nucleus	57.28	57.62
HORVU4Hr1G090030.9	Barley	nucleus	55.74	56.21
HORVU5Hr1G010650.1	Barley	cytosol	56.8	55.94
HORVU0Hr1G010250.3	Barley	cytosol	48.76	55.3
Bra030088.1-P	Field mustard	mitochondrion	7.57	52.46
HORVU5Hr1G093150.2	Barley	cytosol, plastid	60.12	50.65
KRH33388	Soybean	cytosol	4.5	36.54

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.2	Gene3D:3.30.530.20	UniProt:A0A287KIG8	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0008289	EnsemblPlantsGene:HORVU3Hr1G026990	EnsemblPlants:HORVU3Hr1G026990.3	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom
InterPro:IPR001356	InterPro:IPR002913	InterPro:IPR023393	InterPro:MEKHLA	PFAM:PF00046	PFAM:PF01852
PFAM:PF08670	PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF217	SMART:SM00234
SMART:SM00389	SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI000B47C3F3
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:113015902..113033597

Molecular Weight (calculated)

91818.2 Da

IEP (calculated)

6.150

GRAVY (calculated)

-0.040

Length

845 amino acids

Sequence
(BLAST)

001: MVTAREAREA AAAAMDASKY VRYTPEQVEA LERLYYECPK PSSLRRQQLV RECAVLASVD PKQIKVWFQN RRCREKQRKE SGRLQSLNRK LAAMNKLLME
101: ENDRLQKQVS HLVYENGYYR QQTHSVRPAT TDTSCESVVT SGQQNVVAVP PPPPRDASPA GLMSIAEETL TEFLSKATGT AVEWVQMPGM KPGPDSIGII
201: AISHGCAGVA ARACGLVGME PAKVADILKD RPLWLRDCRS MEIVNVLPAG SNGTIELLYM QLYAPTTLAP ARDFWLMRYT SILDDGSLVV CERSLSSKQG
301: GPSMPLVQPF VRGEMLPSGF LIRPSDGGGS VIHIVDHLDL EPWSVPEVVR PLYESSAMVA QKMSMAALRY LRQVAHEDTH SVITGWGRQP AALRALSQKL
401: TRGFNETLGG LADDGWSVIE SDGVDDVCIS VNSSPSKLMS CNATFSDGLP MVSTGVLCAK ASMLLQDVSP PSLLRFLREH RSQWADSSLD AFFASALKPN
501: FCNLPVSRLG GFSGQVILPL AHTFDPEEFL EVIKIGNASN YQDTLMHRDL FLLQMYNGVD ENTIGTCSEL IFAPIDASFS DDSPLLPSGF RIIPIESPLD
601: TSSPNCTLDL ASTLEVGTPG SRITGHSRSG SKAVMTIAFQ FAFESHLQDS VAVMARQYMR SIISSVQRIA LALSSSHLVP HGSSRLAPPV TPEAATLSRW
701: IVQSYRFHFG AELIKPADAS SGESALKALW HHTSAILCCS LKAMPELTFA NQSGLDMLET TLAALREITM DKVLEYEQGG KGLLCADLMA SVAEQGFACV
801: EGGTCASSMG RPASYGKAVA WKVLDDGGAG AAHCVCFAFI DWSFV

Best Arabidopsis Sequence Match ( AT1G52150.1 )
(BLAST)

001: MAMSCKDGKL GCLDNGKYVR YTPEQVEALE RLYHDCPKPS SIRRQQLIRE CPILSNIEPK QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN
101: DRLQKQVSQL VHENSYFRQH TPNPSLPAKD TSCESVVTSG QHQLASQNPQ RDASPAGLLS IAEETLAEFL SKATGTAVEW VQMPGMKPGP DSIGIIAISH
201: GCTGVAARAC GLVGLEPTRV AEIVKDRPSW FRECRAVEVM NVLPTANGGT VELLYMQLYA PTTLAPPRDF WLLRYTSVLE DGSLVVCERS LKSTQNGPSM
301: PLVQNFVRAE MLSSGYLIRP CDGGGSIIHI VDHMDLEACS VPEVLRPLYE SPKVLAQKTT MAALRQLKQI AQEVTQTNSS VNGWGRRPAA LRALSQRLSR
401: GFNEAVNGFT DEGWSVIGDS MDDVTITVNS SPDKLMGLNL TFANGFAPVS NVVLCAKASM LLQNVPPAIL LRFLREHRSE WADNNIDAYL AAAVKVGPCS
501: ARVGGFGGQV ILPLAHTIEH EEFMEVIKLE GLGHSPEDAI VPRDIFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL DSAKEVSSPN
601: RTLDLASALE IGSAGTKAST DQSGNSTCAR SVMTIAFEFG IESHMQEHVA SMARQYVRGI ISSVQRVALA LSPSHISSQV GLRTPLGTPE AQTLARWICQ
701: SYRGYMGVEL LKSNSDGNES ILKNLWHHTD AIICCSMKAL PVFTFANQAG LDMLETTLVA LQDISLEKIF DDNGRKTLCS EFPQIMQQGF ACLQGGICLS
801: SMGRPVSYER AVAWKVLNEE ENAHCICFVF INWSFV

Arabidopsis Description

ATHB-15Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Source:UniProtKB/TrEMBL;Acc:B3H4G8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.