Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G047750.4 | |
| HORVU6Hr1G053460.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G043400.1 | Wheat | cytosol, nucleus, plastid | 93.01 | 94.33 |
| HORVU0Hr1G010250.3 | Barley | cytosol | 79.49 | 91.54 |
| TraesCS5D01G052300.1 | Wheat | mitochondrion, plastid | 93.12 | 90.49 |
| TraesCS5B01G047200.1 | Wheat | extracellular, mitochondrion, nucleus, plastid | 91.72 | 89.53 |
| Os12t0612700-01 | Rice | nucleus | 83.92 | 84.21 |
| VIT_10s0003g04670.t01 | Wine grape | cytosol, nucleus, plastid | 72.49 | 73.61 |
| GSMUA_Achr2P13050_001 | Banana | cytosol | 66.78 | 73.37 |
| GSMUA_Achr4P31660_001 | Banana | cytosol | 73.19 | 73.11 |
| KRH11775 | Soybean | cytosol, nucleus, plastid | 71.79 | 72.81 |
| KRH36781 | Soybean | cytosol, nucleus, plastid | 71.68 | 72.18 |
| GSMUA_Achr5P02420_001 | Banana | cytosol | 73.31 | 71.97 |
| GSMUA_Achr7P01060_001 | Banana | cytosol | 72.03 | 71.94 |
| PGSC0003DMT400030829 | Potato | cytosol, nucleus, plastid | 70.28 | 70.77 |
| GSMUA_Achr8P02960_001 | Banana | cytosol | 68.88 | 70.44 |
| KRH43001 | Soybean | cytosol | 69.46 | 70.2 |
| KRH59117 | Soybean | cytosol | 69.23 | 69.64 |
| Solyc02g024070.2.1 | Tomato | cytosol, nucleus, plastid | 69.0 | 69.57 |
| GSMUA_Achr4P28360_001 | Banana | cytosol | 72.96 | 69.56 |
| PGSC0003DMT400054421 | Potato | cytosol, nucleus, plastid | 67.6 | 69.46 |
| Solyc02g069830.2.1 | Tomato | nucleus | 67.72 | 69.0 |
| CDY43661 | Canola | cytosol | 65.03 | 68.63 |
| HORVU5Hr1G093150.2 | Barley | cytosol, plastid | 79.37 | 67.9 |
| Bra021926.1-P | Field mustard | cytosol | 66.67 | 67.85 |
| AT1G30490.1 | Thale cress | nucleus | 66.43 | 67.78 |
| Bra005398.1-P | Field mustard | cytosol | 67.02 | 67.73 |
| CDY31635 | Canola | nucleus | 66.9 | 67.61 |
| AT2G34710.1 | Thale cress | cytosol | 67.02 | 67.49 |
| Bra032394.1-P | Field mustard | cytosol, nucleus, plastid | 65.97 | 67.38 |
| CDY09572 | Canola | cytosol, nucleus, plastid | 65.97 | 67.38 |
| CDY02297 | Canola | nucleus | 65.97 | 67.38 |
| CDX84286 | Canola | cytosol | 66.67 | 67.37 |
| HORVU5Hr1G061410.29 | Barley | cytosol | 21.68 | 64.36 |
| HORVU1Hr1G041790.2 | Barley | nucleus | 61.42 | 62.74 |
| HORVU4Hr1G090030.9 | Barley | nucleus | 59.32 | 60.74 |
| GSMUA_Achr2P13060_001 | Banana | cytosol | 5.94 | 60.71 |
| HORVU3Hr1G026990.3 | Barley | cytosol, nucleus, plastid | 55.94 | 56.8 |
| CDX71242 | Canola | peroxisome | 4.55 | 46.43 |
| AT5G32670.1 | Thale cress | cytosol, plastid | 8.97 | 40.1 |
| Solyc01g057960.1.1 | Tomato | plastid | 6.29 | 39.13 |
| CDY53980 | Canola | cytosol, nucleus, peroxisome | 6.99 | 38.71 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.2 | Gene3D:3.30.530.20 | UniProt:A0A287QC28 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0008289 | EnsemblPlantsGene:HORVU5Hr1G010650 | EnsemblPlants:HORVU5Hr1G010650.1 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom |
| InterPro:IPR001356 | InterPro:IPR002913 | InterPro:IPR023393 | InterPro:MEKHLA | PFAM:PF00046 | PFAM:PF01852 |
| PFAM:PF08670 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF494 | SMART:SM00234 |
| SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI000B485091 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:26916889..26922615
Molecular Weight (calculated)
88497.2 Da
IEP (calculated)
6.332
GRAVY (calculated)
-0.086
Length
858 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVDLXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXVE ALERVYNECP KPSSLRRQQI IRDCPILCNI EPKQIKVWFQ NRRCREKQRK ESSRMQTVNR
101: KLTAMNKLLM EENDRLQKQV SRLVYENVSA KSLKTKIHNA SAATTDTSCE SVVTSGQQQA LAAPRPQRDA NNPAGLLAIA EETLTAFMSK ATGTAVEWVQ
201: MMGMKPGPDS IGIIAVSHNC IGVAARACGL VSLEPTKVAE ILKDRPSWYR DCRCVDILHV FPTGNGGTIE LIYMQTYAPT TLAAPRDFWT LRYTCGLEDG
301: SLVICERSLT QSTGGPSGPN TPGFIRAEVL PSGYLIRPCE GGGSMIHIVD HVDLDAWSVP EVLRPLYESP KIVAQKMTIA ALRHIRQIAH ESSGEIPYGA
401: GRQPAVLRTF SQRLSRGFND AVSGFPDDGW SLLTSDGAED ITITVNSSPN KLVGSHISPS PLFSAIGGGI LCAKASMLVQ DVPPALLVRF LREHRSEWAD
501: PGVDAYSAAS LRASPYAVPG LRAGGFMGNQ VILPLAHTLE HEEFLEVLRL EGHGFSHDEV LLARDMYLLQ LCSGVDENAS GACAQLVFAP IDESFADDAP
601: LLPSGFRVIP LDTKTDVPSA TRTLDLASAL EVGSGGALRG SGDSPGGCTR SVLTIAFQFS FENHLRESVA AMARQYVRAV MASVQRVAMA IAPSRLGSQI
701: QLKHPPGSPE ALTLASWIGR SYRAHTGEEI RWLDTEEADS PLKLLWNHSD AILCCSLKPA PMFTFGNNAA LDMLETTLVN LQDISLEAIL DDEGRKALCA
801: EFSKVMQQGF AYLPGGVCKS SMGRQASYEQ AVAWKVVGDD VAGAPHCLAX XXXXXXXX
101: KLTAMNKLLM EENDRLQKQV SRLVYENVSA KSLKTKIHNA SAATTDTSCE SVVTSGQQQA LAAPRPQRDA NNPAGLLAIA EETLTAFMSK ATGTAVEWVQ
201: MMGMKPGPDS IGIIAVSHNC IGVAARACGL VSLEPTKVAE ILKDRPSWYR DCRCVDILHV FPTGNGGTIE LIYMQTYAPT TLAAPRDFWT LRYTCGLEDG
301: SLVICERSLT QSTGGPSGPN TPGFIRAEVL PSGYLIRPCE GGGSMIHIVD HVDLDAWSVP EVLRPLYESP KIVAQKMTIA ALRHIRQIAH ESSGEIPYGA
401: GRQPAVLRTF SQRLSRGFND AVSGFPDDGW SLLTSDGAED ITITVNSSPN KLVGSHISPS PLFSAIGGGI LCAKASMLVQ DVPPALLVRF LREHRSEWAD
501: PGVDAYSAAS LRASPYAVPG LRAGGFMGNQ VILPLAHTLE HEEFLEVLRL EGHGFSHDEV LLARDMYLLQ LCSGVDENAS GACAQLVFAP IDESFADDAP
601: LLPSGFRVIP LDTKTDVPSA TRTLDLASAL EVGSGGALRG SGDSPGGCTR SVLTIAFQFS FENHLRESVA AMARQYVRAV MASVQRVAMA IAPSRLGSQI
701: QLKHPPGSPE ALTLASWIGR SYRAHTGEEI RWLDTEEADS PLKLLWNHSD AILCCSLKPA PMFTFGNNAA LDMLETTLVN LQDISLEAIL DDEGRKALCA
801: EFSKVMQQGF AYLPGGVCKS SMGRQASYEQ AVAWKVVGDD VAGAPHCLAX XXXXXXXX
001: MMMVHSMSRD MMNRESPDKG LDSGKYVRYT PEQVEALERV YTECPKPSSL RRQQLIRECP ILSNIEPKQI KVWFQNRRCR EKQRKEAARL QTVNRKLNAM
101: NKLLMEENDR LQKQVSNLVY ENGHMKHQLH TASGTTTDNS CESVVVSGQQ HQQQNPNPQH QQRDANNPAG LLSIAEEALA EFLSKATGTA VDWVQMIGMK
201: PGPDSIGIVA ISRNCSGIAA RACGLVSLEP MKVAEILKDR PSWLRDCRSV DTLSVIPAGN GGTIELIYTQ MYAPTTLAAA RDFWTLRYST CLEDGSYVVC
301: ERSLTSATGG PTGPPSSNFV RAEMKPSGFL IRPCDGGGSI LHIVDHVDLD AWSVPEVMRP LYESSKILAQ KMTVAALRHV RQIAQETSGE VQYGGGRQPA
401: VLRTFSQRLC RGFNDAVNGF VDDGWSPMGS DGAEDVTVMI NLSPGKFGGS QYGNSFLPSF GSGVLCAKAS MLLQNVPPAV LVRFLREHRS EWADYGVDAY
501: AAASLRASPF AVPCARAGGF PSNQVILPLA QTVEHEESLE VVRLEGHAYS PEDMGLARDM YLLQLCSGVD ENVVGGCAQL VFAPIDESFA DDAPLLPSGF
601: RIIPLEQKST PNGASANRTL DLASALEGST RQAGEADPNG CNFRSVLTIA FQFTFDNHSR DSVASMARQY VRSIVGSIQR VALAIAPRPG SNISPISVPT
701: SPEALTLVRW ISRSYSLHTG ADLFGSDSQT SGDTLLHQLW NHSDAILCCS LKTNASPVFT FANQTGLDML ETTLVALQDI MLDKTLDEPG RKALCSEFPK
801: IMQQGYAHLP AGVCASSMGR MVSYEQATVW KVLEDDESNH CLAFMFVNWS FV
101: NKLLMEENDR LQKQVSNLVY ENGHMKHQLH TASGTTTDNS CESVVVSGQQ HQQQNPNPQH QQRDANNPAG LLSIAEEALA EFLSKATGTA VDWVQMIGMK
201: PGPDSIGIVA ISRNCSGIAA RACGLVSLEP MKVAEILKDR PSWLRDCRSV DTLSVIPAGN GGTIELIYTQ MYAPTTLAAA RDFWTLRYST CLEDGSYVVC
301: ERSLTSATGG PTGPPSSNFV RAEMKPSGFL IRPCDGGGSI LHIVDHVDLD AWSVPEVMRP LYESSKILAQ KMTVAALRHV RQIAQETSGE VQYGGGRQPA
401: VLRTFSQRLC RGFNDAVNGF VDDGWSPMGS DGAEDVTVMI NLSPGKFGGS QYGNSFLPSF GSGVLCAKAS MLLQNVPPAV LVRFLREHRS EWADYGVDAY
501: AAASLRASPF AVPCARAGGF PSNQVILPLA QTVEHEESLE VVRLEGHAYS PEDMGLARDM YLLQLCSGVD ENVVGGCAQL VFAPIDESFA DDAPLLPSGF
601: RIIPLEQKST PNGASANRTL DLASALEGST RQAGEADPNG CNFRSVLTIA FQFTFDNHSR DSVASMARQY VRSIVGSIQR VALAIAPRPG SNISPISVPT
701: SPEALTLVRW ISRSYSLHTG ADLFGSDSQT SGDTLLHQLW NHSDAILCCS LKTNASPVFT FANQTGLDML ETTLVALQDI MLDKTLDEPG RKALCSEFPK
801: IMQQGYAHLP AGVCASSMGR MVSYEQATVW KVLEDDESNH CLAFMFVNWS FV
Arabidopsis Description
ATHB-14Homeobox-leucine zipper protein ATHB-14 [Source:UniProtKB/Swiss-Prot;Acc:O04291]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.