Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G047750.4 | |
| HORVU6Hr1G053460.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G385300.1 | Wheat | cytosol, nucleus, plastid | 82.95 | 96.52 |
| TraesCS5A01G375800.1 | Wheat | cytosol, nucleus, plastid | 82.75 | 96.29 |
| TraesCS5B01G378000.1 | Wheat | cytosol, nucleus, plastid | 82.65 | 96.17 |
| Os03t0640800-01 | Rice | plastid | 79.76 | 93.13 |
| EER91178 | Sorghum | nucleus | 79.16 | 92.97 |
| Zm00001d033246_P004 | Maize | cytosol | 79.26 | 92.87 |
| Zm00001d013699_P001 | Maize | cytosol | 78.76 | 92.29 |
| GSMUA_Achr2P13060_001 | Banana | cytosol | 6.88 | 82.14 |
| GSMUA_Achr4P31660_001 | Banana | cytosol | 69.19 | 80.79 |
| VIT_10s0003g04670.t01 | Wine grape | cytosol, nucleus, plastid | 67.5 | 80.12 |
| GSMUA_Achr5P02420_001 | Banana | cytosol | 69.49 | 79.75 |
| GSMUA_Achr7P01060_001 | Banana | cytosol | 68.1 | 79.51 |
| HORVU5Hr1G010650.1 | Barley | cytosol | 67.9 | 79.37 |
| HORVU0Hr1G010250.3 | Barley | cytosol | 58.23 | 78.39 |
| GSMUA_Achr2P13050_001 | Banana | cytosol | 60.92 | 78.23 |
| KRH11775 | Soybean | cytosol, nucleus, plastid | 65.8 | 78.01 |
| KRH36781 | Soybean | cytosol, nucleus, plastid | 65.8 | 77.46 |
| GSMUA_Achr4P28360_001 | Banana | cytosol | 69.19 | 77.11 |
| PGSC0003DMT400030829 | Potato | cytosol, nucleus, plastid | 65.3 | 76.88 |
| GSMUA_Achr8P02960_001 | Banana | cytosol | 64.11 | 76.64 |
| Solyc02g024070.2.1 | Tomato | cytosol, nucleus, plastid | 64.31 | 75.79 |
| PGSC0003DMT400054421 | Potato | cytosol, nucleus, plastid | 62.71 | 75.33 |
| KRH43001 | Soybean | cytosol | 63.51 | 75.03 |
| KRH59117 | Soybean | cytosol | 63.51 | 74.68 |
| Solyc02g069830.2.1 | Tomato | nucleus | 62.61 | 74.58 |
| CDY43661 | Canola | cytosol | 59.62 | 73.55 |
| AT2G34710.1 | Thale cress | cytosol | 62.11 | 73.12 |
| AT1G30490.1 | Thale cress | nucleus | 60.92 | 72.65 |
| Bra005398.1-P | Field mustard | cytosol | 61.42 | 72.56 |
| CDX84286 | Canola | cytosol | 61.32 | 72.44 |
| CDY31635 | Canola | nucleus | 61.32 | 72.44 |
| CDY02297 | Canola | nucleus | 60.62 | 72.38 |
| Bra032394.1-P | Field mustard | cytosol, nucleus, plastid | 60.62 | 72.38 |
| Bra021926.1-P | Field mustard | cytosol | 60.82 | 72.36 |
| CDY09572 | Canola | cytosol, nucleus, plastid | 60.52 | 72.26 |
| HORVU1Hr1G041790.2 | Barley | nucleus | 56.33 | 67.26 |
| HORVU5Hr1G061410.29 | Barley | cytosol | 18.64 | 64.71 |
| HORVU4Hr1G090030.9 | Barley | nucleus | 53.74 | 64.32 |
| HORVU3Hr1G026990.3 | Barley | cytosol, nucleus, plastid | 50.65 | 60.12 |
| CDX71242 | Canola | peroxisome | 4.09 | 48.81 |
| Solyc01g057960.1.1 | Tomato | plastid | 5.98 | 43.48 |
| AT5G32670.1 | Thale cress | cytosol, plastid | 8.08 | 42.19 |
| CDY53980 | Canola | cytosol, nucleus, peroxisome | 6.48 | 41.94 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.2 | Gene3D:3.30.530.20 | UniProt:A0A287S9T2 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0008289 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:HORVU5Hr1G093150 | EnsemblPlants:HORVU5Hr1G093150.2 |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 | InterPro:IPR023393 | InterPro:MEKHLA |
| PFAM:PF00046 | PFAM:PF01852 | PFAM:PF08670 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 |
| PANTHER:PTHR24326:SF494 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf |
| InterPro:START_lipid-bd_dom | TMHMM:TMhelix | UniParc:UPI000B46D074 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr5H:+:590535600..590541612
Molecular Weight (calculated)
107534.0 Da
IEP (calculated)
7.924
GRAVY (calculated)
-0.222
Length
1003 amino acids
Sequence
(BLAST)
(BLAST)
0001: RPQFTVRERE REEKSSSINK STALCFPFVP LPPLRPASAS APLLNQTPPP PSPPFPSLPS ALSSTPPRRQ PPTPHHHRHH HGHGVHGRRR AEGMTRRRPW
0101: PWLILSLLPL LLTRLAAVVP VAGGSRWRGR WWCTAGTAGT AGXXXXXXXX XXXXXXXXDR SSPGGGSGGG PQVDTGKYVR YTPEQVDALE RVYSECPKPS
0201: SLRRQQLIRE CPILSNIEPK QIKVWFQNRR CREKQRKEAS RLQTVNRKLS AMNKLLMEEN DRLQKQVSRL VYENGYMRTH LSNPSVATTD TSCESVVTSG
0301: QHQQQQNAVV PRPQRDANNP AGLLAIAEET LAEFLSKATG TAVDWVQMVG MKPGPDSIGI IAVSHNCSGV AARACGLVSL EPTKVAEILK DRPSWYRDCR
0401: CVDVLQIIPT GNGGTIELIY MQTYAPTTLA APRDFWILRY TSGLEDGSLV ICERSLTQAT GGPSGPNTPN FVRAEVLPSG YLIRPCEGGG SMIHIVDHVD
0501: LDAWSVPEVL RPLYESPKIL AQKMTIAALR HIRQIAHESS GEMPYGGGRQ PAVLRTFSQR LSRGFNDAVN GFLDDGWSLM SSDGAEDVTI AINSSPNKLA
0601: GTHVNPSQMF SAIGGGVLCA KASMLLQNVP PALLVRFLRE HRSEWADPGV DAYSAAALRA SPYAVPGLRA SGFMGSQVIL PLAHTLEHEE FLEVIRLEGH
0701: SLCHDEVVLS RDMYLLQLCS GVDENAAGAC AQLVFAPIDE SFADDAPLLP SGFRVIPLDA KTDAPSATRT LDLASTLEVG PGGTRAPSDA SSTSNTRSVL
0801: TIAFQFSYEN HLRESVAAMA RQYVRTVVAS VQRVAMAIAP SRPGGQIEMK NPPGSPEAHT LARWIGRSYR FHTGAELLCT ESQSADASLK ALWQHSDSIM
0901: CCSLKAAPVF TFANQAGLDM LETTLIALQD ISLEKILDDD GRKALCSEFP KIMQQGFAYL PGGVCVSSMG RPVSYEQAVA WKVLGDDDAP HCLAFMFVNW
1001: SFV
0101: PWLILSLLPL LLTRLAAVVP VAGGSRWRGR WWCTAGTAGT AGXXXXXXXX XXXXXXXXDR SSPGGGSGGG PQVDTGKYVR YTPEQVDALE RVYSECPKPS
0201: SLRRQQLIRE CPILSNIEPK QIKVWFQNRR CREKQRKEAS RLQTVNRKLS AMNKLLMEEN DRLQKQVSRL VYENGYMRTH LSNPSVATTD TSCESVVTSG
0301: QHQQQQNAVV PRPQRDANNP AGLLAIAEET LAEFLSKATG TAVDWVQMVG MKPGPDSIGI IAVSHNCSGV AARACGLVSL EPTKVAEILK DRPSWYRDCR
0401: CVDVLQIIPT GNGGTIELIY MQTYAPTTLA APRDFWILRY TSGLEDGSLV ICERSLTQAT GGPSGPNTPN FVRAEVLPSG YLIRPCEGGG SMIHIVDHVD
0501: LDAWSVPEVL RPLYESPKIL AQKMTIAALR HIRQIAHESS GEMPYGGGRQ PAVLRTFSQR LSRGFNDAVN GFLDDGWSLM SSDGAEDVTI AINSSPNKLA
0601: GTHVNPSQMF SAIGGGVLCA KASMLLQNVP PALLVRFLRE HRSEWADPGV DAYSAAALRA SPYAVPGLRA SGFMGSQVIL PLAHTLEHEE FLEVIRLEGH
0701: SLCHDEVVLS RDMYLLQLCS GVDENAAGAC AQLVFAPIDE SFADDAPLLP SGFRVIPLDA KTDAPSATRT LDLASTLEVG PGGTRAPSDA SSTSNTRSVL
0801: TIAFQFSYEN HLRESVAAMA RQYVRTVVAS VQRVAMAIAP SRPGGQIEMK NPPGSPEAHT LARWIGRSYR FHTGAELLCT ESQSADASLK ALWQHSDSIM
0901: CCSLKAAPVF TFANQAGLDM LETTLIALQD ISLEKILDDD GRKALCSEFP KIMQQGFAYL PGGVCVSSMG RPVSYEQAVA WKVLGDDDAP HCLAFMFVNW
1001: SFV
001: MMMVHSMSRD MMNRESPDKG LDSGKYVRYT PEQVEALERV YTECPKPSSL RRQQLIRECP ILSNIEPKQI KVWFQNRRCR EKQRKEAARL QTVNRKLNAM
101: NKLLMEENDR LQKQVSNLVY ENGHMKHQLH TASGTTTDNS CESVVVSGQQ HQQQNPNPQH QQRDANNPAG LLSIAEEALA EFLSKATGTA VDWVQMIGMK
201: PGPDSIGIVA ISRNCSGIAA RACGLVSLEP MKVAEILKDR PSWLRDCRSV DTLSVIPAGN GGTIELIYTQ MYAPTTLAAA RDFWTLRYST CLEDGSYVVC
301: ERSLTSATGG PTGPPSSNFV RAEMKPSGFL IRPCDGGGSI LHIVDHVDLD AWSVPEVMRP LYESSKILAQ KMTVAALRHV RQIAQETSGE VQYGGGRQPA
401: VLRTFSQRLC RGFNDAVNGF VDDGWSPMGS DGAEDVTVMI NLSPGKFGGS QYGNSFLPSF GSGVLCAKAS MLLQNVPPAV LVRFLREHRS EWADYGVDAY
501: AAASLRASPF AVPCARAGGF PSNQVILPLA QTVEHEESLE VVRLEGHAYS PEDMGLARDM YLLQLCSGVD ENVVGGCAQL VFAPIDESFA DDAPLLPSGF
601: RIIPLEQKST PNGASANRTL DLASALEGST RQAGEADPNG CNFRSVLTIA FQFTFDNHSR DSVASMARQY VRSIVGSIQR VALAIAPRPG SNISPISVPT
701: SPEALTLVRW ISRSYSLHTG ADLFGSDSQT SGDTLLHQLW NHSDAILCCS LKTNASPVFT FANQTGLDML ETTLVALQDI MLDKTLDEPG RKALCSEFPK
801: IMQQGYAHLP AGVCASSMGR MVSYEQATVW KVLEDDESNH CLAFMFVNWS FV
101: NKLLMEENDR LQKQVSNLVY ENGHMKHQLH TASGTTTDNS CESVVVSGQQ HQQQNPNPQH QQRDANNPAG LLSIAEEALA EFLSKATGTA VDWVQMIGMK
201: PGPDSIGIVA ISRNCSGIAA RACGLVSLEP MKVAEILKDR PSWLRDCRSV DTLSVIPAGN GGTIELIYTQ MYAPTTLAAA RDFWTLRYST CLEDGSYVVC
301: ERSLTSATGG PTGPPSSNFV RAEMKPSGFL IRPCDGGGSI LHIVDHVDLD AWSVPEVMRP LYESSKILAQ KMTVAALRHV RQIAQETSGE VQYGGGRQPA
401: VLRTFSQRLC RGFNDAVNGF VDDGWSPMGS DGAEDVTVMI NLSPGKFGGS QYGNSFLPSF GSGVLCAKAS MLLQNVPPAV LVRFLREHRS EWADYGVDAY
501: AAASLRASPF AVPCARAGGF PSNQVILPLA QTVEHEESLE VVRLEGHAYS PEDMGLARDM YLLQLCSGVD ENVVGGCAQL VFAPIDESFA DDAPLLPSGF
601: RIIPLEQKST PNGASANRTL DLASALEGST RQAGEADPNG CNFRSVLTIA FQFTFDNHSR DSVASMARQY VRSIVGSIQR VALAIAPRPG SNISPISVPT
701: SPEALTLVRW ISRSYSLHTG ADLFGSDSQT SGDTLLHQLW NHSDAILCCS LKTNASPVFT FANQTGLDML ETTLVALQDI MLDKTLDEPG RKALCSEFPK
801: IMQQGYAHLP AGVCASSMGR MVSYEQATVW KVLEDDESNH CLAFMFVNWS FV
Arabidopsis Description
ATHB-14Homeobox-leucine zipper protein ATHB-14 [Source:UniProtKB/Swiss-Prot;Acc:O04291]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.