Factsheet for Zm00001d033246_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d029512_P001
Zm00001d050948_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G30490.1	Zm00001d050948_P001	AT1G12980.1	17376809
AT1G30490.1	Zm00001d050948_P001	AT1G12980.1	18830673
AT1G30490.1	Zm00001d029512_P001	AT3G45610.1	21245844
AT2G34710.1	Zm00001d029512_P001	AT3G45610.1	21245844

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91178	Sorghum	nucleus	99.07	99.3
Zm00001d013699_P001	Maize	cytosol	98.6	98.6
Os03t0640800-01	Rice	plastid	95.44	95.11
TraesCS5D01G385300.1	Wheat	cytosol, nucleus, plastid	93.22	92.58
TraesCS5A01G375800.1	Wheat	cytosol, nucleus, plastid	92.99	92.34
TraesCS5B01G378000.1	Wheat	cytosol, nucleus, plastid	92.87	92.23
GSMUA_Achr4P31660_001	Banana	cytosol	81.31	81.02
VIT_10s0003g04670.t01	Wine grape	cytosol, nucleus, plastid	79.67	80.71
GSMUA_Achr5P02420_001	Banana	cytosol	81.78	80.09
GSMUA_Achr7P01060_001	Banana	cytosol	80.14	79.86
GSMUA_Achr2P13060_001	Banana	cytosol	7.83	79.76
GSMUA_Achr2P13050_001	Banana	cytosol	72.66	79.64
HORVU5Hr1G093150.2	Barley	cytosol, plastid	92.87	79.26
Zm00001d041489_P009	Maize	cytosol, nucleus, plastid	79.67	78.84
KRH11775	Soybean	cytosol, nucleus, plastid	77.34	78.25
KRH36781	Soybean	cytosol, nucleus, plastid	77.45	77.82
GSMUA_Achr4P28360_001	Banana	cytosol	81.66	77.67
GSMUA_Achr8P02960_001	Banana	cytosol	75.7	77.23
PGSC0003DMT400030829	Potato	cytosol, nucleus, plastid	76.28	76.64
Solyc02g024070.2.1	Tomato	cytosol, nucleus, plastid	75.35	75.79
PGSC0003DMT400054421	Potato	cytosol, nucleus, plastid	73.48	75.33
KRH43001	Soybean	cytosol	74.65	75.27
KRH59117	Soybean	cytosol	75.0	75.26
Solyc02g069830.2.1	Tomato	nucleus	73.72	74.94
Zm00001d031061_P007	Maize	mitochondrion	77.69	74.38
CDY43661	Canola	cytosol	70.21	73.92
AT2G34710.1	Thale cress	cytosol	73.01	73.36
CDX84286	Canola	cytosol	72.55	73.14
CDY31635	Canola	nucleus	72.43	73.03
Bra005398.1-P	Field mustard	cytosol	72.43	73.03
Bra021926.1-P	Field mustard	cytosol	71.26	72.36
AT1G30490.1	Thale cress	nucleus	71.03	72.29
CDY02297	Canola	nucleus	70.91	72.26
Bra032394.1-P	Field mustard	cytosol, nucleus, plastid	70.91	72.26
CDY09572	Canola	cytosol, nucleus, plastid	70.91	72.26
Zm00001d048527_P028	Maize	nucleus	66.0	66.78
Zm00001d027317_P015	Maize	nucleus	66.24	66.47
Zm00001d032681_P004	Maize	cytosol, nucleus, plastid	64.14	62.96
Zm00001d008869_P001	Maize	cytosol	60.4	60.26
Zm00001d018824_P001	Maize	cytosol	9.46	59.12
Zm00001d026325_P001	Maize	mitochondrion	5.84	58.82
Zm00001d049529_P001	Maize	cytosol, plastid	11.57	52.11
Zm00001d014252_P002	Maize	cytosol	10.05	49.43
CDX71242	Canola	peroxisome	4.67	47.62
Solyc01g057960.1.1	Tomato	plastid	6.78	42.03
AT5G32670.1	Thale cress	cytosol, plastid	9.35	41.67
CDY53980	Canola	cytosol, nucleus, peroxisome	7.36	40.65
Zm00001d024060_P001	Maize	mitochondrion	9.11	33.48

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100192557	MapMan:15.5.3.2	Gene3D:3.30.530.20	UniProt:A0A1D6KX67	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0008289	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356
InterPro:IPR002913	InterPro:IPR023393	InterPro:MEKHLA	ProteinID:ONM07052.1	ProteinID:ONM07053.1	ProteinID:ONM07056.1
PFAM:PF00046	PFAM:PF01852	PFAM:PF08670	PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326
PANTHER:PTHR24326:SF494	SMART:SM00234	SMART:SM00389	SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START-like_dom_sf
InterPro:START_lipid-bd_dom	UniParc:UPI0008443E6D	EnsemblPlantsGene:Zm00001d033246	EnsemblPlants:Zm00001d033246_P004	EnsemblPlants:Zm00001d033246_T004	SEG:seg

Description

Homeobox-transcription factor 124Homeobox-leucine zipper protein ATHB-14

Coordinates

chr1:+:255864309..255869980

Molecular Weight (calculated)

93173.2 Da

IEP (calculated)

6.585

GRAVY (calculated)

-0.188

Length

856 amino acids

Sequence
(BLAST)

001: MSTALAVVGG GKDRPSPGGG GAPQVDTGKY VRYTPEQVEA LERVYSECPK PSSLRRQQLI RECPILSNIE PKQIKVWFQN RRCREKQRKE ASRLQTVNRK
101: LTAMNKLLME ENDRLQKQVS RLVYENGYMR QQLHNPSAAT TDTSCESVVT SGQHHQQQNP AAPRPQRDAN NPAGLLAIAE ETLAEFLSKA TGTAVDWVQM
201: VGMKPGPDSI GIIAVSHNCS GVAARACGLV SLEPTKVAEI LKDRPSWYRD CRCVDILHVI PTGNGGTIEL IYMQTYAPTT LAAPRDFWTL RYTSGLEDGS
301: LVICERSLTQ STGGPSGPNT PNFVRAEVLP SGYLIRPCEG GGSMIHIVDH VDLDAWSVPE VLRPLYESPK ILAQKTTIAA LRHIRQIAHE SSGEMPYGGG
401: RQPAVLRTFS QRLSRGFNDA VNGFPDDGWS LMSSDGAEDV TIAINSSPNK LIGPHVNSSQ LFTAIGGGIL CAKASMLLQN VPPALLVRFL REHRSEWADP
501: GVDAYSAAAL RASPYAVPGL RASGFMGSQV ILPLAHTLEH EEFLEVIRLE GHSLCHDEVV LSRDMYLLQL CSGVDENAAG ACAQLVFAPI DESFADDAPL
601: LPSGFRVIPL DAKTDPPSGT RTLDLASTLE VGSGGTTRAS SDASSTCNTR SVLTIAFQFS YENHLRESVA AMARQYVRTV VASVQRVAMA IAPSRIGGQL
701: EMKQTPGSPE AHTLARWIGR SYRFHTGAEL LRTDTQCTDA SLKALWQHSD SIMCCSLKAA PVFTFANQAG LDMLETTLIA LQDISLEKIL DDDGRKALCT
801: EYPKIMQQGF AYLPGGVCVS SMGRPVSYEQ AVAWKVLSDD DTPHCLAFMF VNWSFV

Best Arabidopsis Sequence Match ( AT2G34710.1 )
(BLAST)

001: MMMVHSMSRD MMNRESPDKG LDSGKYVRYT PEQVEALERV YTECPKPSSL RRQQLIRECP ILSNIEPKQI KVWFQNRRCR EKQRKEAARL QTVNRKLNAM
101: NKLLMEENDR LQKQVSNLVY ENGHMKHQLH TASGTTTDNS CESVVVSGQQ HQQQNPNPQH QQRDANNPAG LLSIAEEALA EFLSKATGTA VDWVQMIGMK
201: PGPDSIGIVA ISRNCSGIAA RACGLVSLEP MKVAEILKDR PSWLRDCRSV DTLSVIPAGN GGTIELIYTQ MYAPTTLAAA RDFWTLRYST CLEDGSYVVC
301: ERSLTSATGG PTGPPSSNFV RAEMKPSGFL IRPCDGGGSI LHIVDHVDLD AWSVPEVMRP LYESSKILAQ KMTVAALRHV RQIAQETSGE VQYGGGRQPA
401: VLRTFSQRLC RGFNDAVNGF VDDGWSPMGS DGAEDVTVMI NLSPGKFGGS QYGNSFLPSF GSGVLCAKAS MLLQNVPPAV LVRFLREHRS EWADYGVDAY
501: AAASLRASPF AVPCARAGGF PSNQVILPLA QTVEHEESLE VVRLEGHAYS PEDMGLARDM YLLQLCSGVD ENVVGGCAQL VFAPIDESFA DDAPLLPSGF
601: RIIPLEQKST PNGASANRTL DLASALEGST RQAGEADPNG CNFRSVLTIA FQFTFDNHSR DSVASMARQY VRSIVGSIQR VALAIAPRPG SNISPISVPT
701: SPEALTLVRW ISRSYSLHTG ADLFGSDSQT SGDTLLHQLW NHSDAILCCS LKTNASPVFT FANQTGLDML ETTLVALQDI MLDKTLDEPG RKALCSEFPK
801: IMQQGYAHLP AGVCASSMGR MVSYEQATVW KVLEDDESNH CLAFMFVNWS FV

Arabidopsis Description

ATHB-14Homeobox-leucine zipper protein ATHB-14 [Source:UniProtKB/Swiss-Prot;Acc:O04291]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.