Factsheet for Zm00001d041489_P009

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d029512_P001
Zm00001d050948_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G30490.1	Zm00001d050948_P001	AT1G12980.1	17376809
AT1G30490.1	Zm00001d050948_P001	AT1G12980.1	18830673
AT1G30490.1	Zm00001d029512_P001	AT3G45610.1	21245844
AT2G34710.1	Zm00001d029512_P001	AT3G45610.1	21245844

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17386	Sorghum	mitochondrion	90.98	91.83
Zm00001d031061_P007	Maize	mitochondrion	86.59	83.78
Zm00001d033246_P004	Maize	cytosol	78.84	79.67
Zm00001d013699_P001	Maize	cytosol	78.38	79.21
GSMUA_Achr2P13050_001	Banana	cytosol	66.82	74.01
VIT_10s0003g04670.t01	Wine grape	cytosol, nucleus, plastid	71.1	72.78
GSMUA_Achr4P31660_001	Banana	cytosol	71.45	71.94
GSMUA_Achr7P01060_001	Banana	cytosol	71.33	71.83
KRH11775	Soybean	cytosol, nucleus, plastid	70.17	71.75
GSMUA_Achr5P02420_001	Banana	cytosol	72.49	71.74
KRH36781	Soybean	cytosol, nucleus, plastid	69.36	70.42
PGSC0003DMT400030829	Potato	cytosol, nucleus, plastid	69.25	70.31
GSMUA_Achr8P02960_001	Banana	cytosol	67.75	69.85
GSMUA_Achr4P28360_001	Banana	cytosol	71.79	69.0
KRH59117	Soybean	cytosol	67.98	68.93
CDY43661	Canola	cytosol	64.74	68.88
KRH43001	Soybean	cytosol	67.51	68.79
Solyc02g024070.2.1	Tomato	cytosol, nucleus, plastid	67.63	68.74
CDY31635	Canola	nucleus	66.82	68.08
AT2G34710.1	Thale cress	cytosol	67.05	68.08
Bra021926.1-P	Field mustard	cytosol	66.01	67.73
Bra005398.1-P	Field mustard	cytosol	66.47	67.73
CDX84286	Canola	cytosol	66.36	67.61
Solyc02g069830.2.1	Tomato	nucleus	65.78	67.58
PGSC0003DMT400054421	Potato	cytosol, nucleus, plastid	65.2	67.54
AT1G30490.1	Thale cress	nucleus	65.43	67.3
CDY09572	Canola	cytosol, nucleus, plastid	64.86	66.79
CDY02297	Canola	nucleus	64.86	66.79
Bra032394.1-P	Field mustard	cytosol, nucleus, plastid	64.86	66.79
Zm00001d018824_P001	Maize	cytosol	10.29	64.96
Zm00001d048527_P028	Maize	nucleus	59.77	61.11
Zm00001d027317_P015	Maize	nucleus	59.77	60.61
Zm00001d032681_P004	Maize	cytosol, nucleus, plastid	58.38	57.91
Zm00001d008869_P001	Maize	cytosol	55.03	55.48
Zm00001d026325_P001	Maize	mitochondrion	5.43	55.29
GSMUA_Achr2P13060_001	Banana	cytosol	5.32	54.76
Zm00001d014252_P002	Maize	cytosol	9.83	48.85
Zm00001d049529_P001	Maize	cytosol, plastid	10.29	46.84
AT5G32670.1	Thale cress	cytosol, plastid	8.9	40.1
CDX71242	Canola	peroxisome	3.7	38.1
Solyc01g057960.1.1	Tomato	plastid	5.43	34.06
CDY53980	Canola	cytosol, nucleus, peroxisome	5.9	32.9
Zm00001d024060_P001	Maize	mitochondrion	8.55	31.76

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100274567	MapMan:15.5.3.2	Gene3D:3.30.530.20	UniProt:A0A1D6MWG4	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0008289	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356
InterPro:IPR002913	InterPro:IPR023393	InterPro:MEKHLA	ProteinID:ONM33116.1	PFAM:PF00046	PFAM:PF01852
PFAM:PF08670	PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF494	SMART:SM00234
SMART:SM00389	SUPFAM:SSF46689	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI0008456DE8
EnsemblPlantsGene:Zm00001d041489	EnsemblPlants:Zm00001d041489_P009	EnsemblPlants:Zm00001d041489_T009	:	:	:

Description

Homeobox-transcription factor 25Homeobox-leucine zipper protein ATHB-14

Coordinates

chr3:-:123607224..123613597

Molecular Weight (calculated)

93944.7 Da

IEP (calculated)

7.000

GRAVY (calculated)

-0.133

Length

865 amino acids

Sequence
(BLAST)

001: MAAVASRERL SPGAAPQVDA GKYVRYTPEQ VEALERVYSE CPKPSSLRRQ HLIRDCPILR NIEPKQIKVW FQNRRSPLNR VSIVVGRCRE KQRKESSRLQ
101: TVNRKLSAMN KLLMEENDRL QKQVSRLVFD NGYMKNRLHS PSVATTDTSC ESVVTSGQHN QQQNPAVLHP PQRDANNPAG LLAIAEETLA EFMSKATGTA
201: VNWVQMVGMK PGPDSVGIIA VSHNCSGVAA RACGLVSLEP TKVAEILKDR ASWYRDCRHV DVLHVIPTGN GGTIELIYMQ TYALTTLAEP RDFWTLRYTS
301: GLDDGSLVIC ERSLTQSTGG PSGPNTPNFI RAEVLPSGYL IRPCDGGGSM IYIVDHVNLN ACSVPEVLRP LYESPKILAQ KMTAAALRHI RQIAHESSGE
401: MPYGAGRQPA VLRTFSQRLS RGFNDAVSGF PDDGWSCLLN TDGAEDITVT INSSPNKLVG SHVSASPLFS AMGGGIMCAK ASMLLQNVPP ALLVRFLREH
501: RSEWADPGID AYSVASLRAN PYTVPGLRAG GFMGNQVILP LARTLEHEES LEVIRLEGHG FSHEEVLMSR DMFLLQLCSG VDEDAPGACA QLVFAPIDES
601: FADDAPLLPS GFRVIPLDAK TDVPTATTRT LDLASALEVG SGGSGMRASC DGSGTCATRS VLTIAFQFSF ENHLRESVAA MAKQYVRGVM ASVQRVAMAI
701: APSRLGSRIE LKHPPGSPEA LALATWIGRS YRAHTGTEIR WSDTEGADSP LMLFWKHSDA ILCCSLKPAF TLKFANSAGF DILETTMVNI QDLPLEAVLD
801: EEGQKALSAQ LPAIMQQGLA YLPGGVCRSS MGRQASYEQA VAWKVVGDDG APQCLALMLA NWTFI

Best Arabidopsis Sequence Match ( AT1G30490.1 )
(BLAST)

001: MMAHHSMDDR DSPDKGFDSG KYVRYTPEQV EALERVYAEC PKPSSLRRQQ LIRECPILCN IEPRQIKVWF QNRRCREKQR KESARLQTVN RKLSAMNKLL
101: MEENDRLQKQ VSNLVYENGF MKHRIHTASG TTTDNSCESV VVSGQQRQQQ NPTHQHPQRD VNNPANLLSI AEETLAEFLC KATGTAVDWV QMIGMKPGPD
201: SIGIVAVSRN CSGIAARACG LVSLEPMKVA EILKDRPSWF RDCRCVETLN VIPTGNGGTI ELVNTQIYAP TTLAAARDFW TLRYSTSLED GSYVVCERSL
301: TSATGGPNGP LSSSFVRAKM LSSGFLIRPC DGGGSIIHIV DHVDLDVSSV PEVLRPLYES SKILAQKMTV AALRHVRQIA QETSGEVQYS GGRQPAVLRT
401: FSQRLCRGFN DAVNGFVDDG WSPMSSDGGE DITIMINSSS AKFAGSQYGS SFLPSFGSGV LCAKASMLLQ NVPPLVLIRF LREHRAEWAD YGVDAYSAAS
501: LRATPYAVPC VRTGGFPSNQ VILPLAQTLE HEEFLEVVRL GGHAYSPEDM GLSRDMYLLQ LCSGVDENVV GGCAQLVFAP IDESFADDAP LLPSGFRVIP
601: LDQKTNPNDH QSASRTRDLA SSLDGSTKTD SETNSRLVLT IAFQFTFDNH SRDNVATMAR QYVRNVVGSI QRVALAITPR PGSMQLPTSP EALTLVRWIT
701: RSYSIHTGAD LFGADSQSCG GDTLLKQLWD HSDAILCCSL KTNASPVFTF ANQAGLDMLE TTLVALQDIM LDKTLDDSGR RALCSEFAKI MQQGYANLPA
801: GICVSSMGRP VSYEQATVWK VVDDNESNHC LAFTLVSWSF V

Arabidopsis Description

ATHB-9Homeobox-leucine zipper protein ATHB-9 [Source:UniProtKB/Swiss-Prot;Acc:O04292]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.