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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, secretory
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:golgi
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d029512_P001
Zm00001d050948_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G30490.1 Zm00001d050948_P001 AT1G12980.1 17376809
AT1G30490.1 Zm00001d050948_P001 AT1G12980.1 18830673
AT1G30490.1 Zm00001d029512_P001 AT3G45610.1 21245844
AT2G34710.1 Zm00001d029512_P001 AT3G45610.1 21245844
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d026325_P001 Maize mitochondrion 21.9 35.29
Zm00001d014252_P002 Maize cytosol 24.09 18.97
Zm00001d024060_P001 Maize mitochondrion 27.01 15.88
Zm00001d041489_P009 Maize cytosol, nucleus, plastid 64.96 10.29
EES17386 Sorghum mitochondrion 64.23 10.27
GSMUA_Achr2P13050_001 Banana cytosol 54.74 9.6
Zm00001d033246_P004 Maize cytosol 59.12 9.46
Zm00001d013699_P001 Maize cytosol 59.12 9.46
GSMUA_Achr8P02960_001 Banana cytosol 56.93 9.3
Zm00001d031061_P007 Maize mitochondrion 60.58 9.28
GSMUA_Achr4P31660_001 Banana cytosol 55.47 8.85
GSMUA_Achr5P02420_001 Banana cytosol 56.2 8.81
GSMUA_Achr7P01060_001 Banana cytosol 54.74 8.73
VIT_10s0003g04670.t01 Wine grape cytosol, nucleus, plastid 53.28 8.64
GSMUA_Achr4P28360_001 Banana cytosol 56.2 8.56
KRH36781 Soybean cytosol, nucleus, plastid 52.55 8.45
KRH11775 Soybean cytosol, nucleus, plastid 51.82 8.39
CDY43661 Canola cytosol 49.63 8.36
KRH59117 Soybean cytosol 51.82 8.32
AT1G30490.1 Thale cress nucleus 51.09 8.32
Solyc02g069830.2.1 Tomato nucleus 51.09 8.31
PGSC0003DMT400030829 Potato cytosol, nucleus, plastid 51.09 8.22
AT2G34710.1 Thale cress cytosol 51.09 8.22
PGSC0003DMT400054421 Potato cytosol, nucleus, plastid 49.63 8.14
KRH43001 Soybean cytosol 50.37 8.13
Bra005398.1-P Field mustard cytosol 50.37 8.13
CDY31635 Canola nucleus 50.37 8.13
CDX84286 Canola cytosol 50.37 8.13
CDY09572 Canola cytosol, nucleus, plastid 49.63 8.1
CDY02297 Canola nucleus 49.63 8.1
Bra032394.1-P Field mustard cytosol, nucleus, plastid 49.63 8.1
Solyc02g024070.2.1 Tomato cytosol, nucleus, plastid 48.91 7.87
Bra021926.1-P Field mustard cytosol 48.18 7.83
Zm00001d032681_P004 Maize cytosol, nucleus, plastid 47.45 7.45
Zm00001d008869_P001 Maize cytosol 45.99 7.34
Zm00001d048527_P028 Maize nucleus 43.8 7.09
Zm00001d027317_P015 Maize nucleus 43.07 6.92
Zm00001d049529_P001 Maize cytosol, plastid 2.19 1.58
Solyc01g057960.1.1 Tomato plastid 1.46 1.45
CDY53980 Canola cytosol, nucleus, peroxisome 1.46 1.29
AT5G32670.1 Thale cress cytosol, plastid 0.73 0.52
CDX71242 Canola peroxisome 0.0 0.0
GSMUA_Achr2P13060_001 Banana cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:Zm00001d018824_P001EnsemblPlants:Zm00001d018824_T001EnsemblPlantsGene:Zm00001d018824GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0005575GO:GO:0016020GO:GO:0016021ncoils:CoilProteinID:ONM51399.1
SEG:segTMHMM:TMhelixUniParc:UPI0008458F18UniProt:A0A1D6HSK9MapMan:35.1:
Description
Homeobox-leucine zipper protein ATHB-15
Coordinates
chr7:-:6510464..6511271
Molecular Weight (calculated)
14808.9 Da
IEP (calculated)
6.503
GRAVY (calculated)
-0.059
Length
137 amino acids
Sequence
(BLAST)
001: MNKLLMEEND RLQKQVSRLV LDNGYMKNRL HSPSVATTDT TCECVVTSGQ HNQQPSSSAS STKGCEQPSR VSLKPGYISN LILAVMLIFL LSSLLAIAEE
101: TLAEFMSKAT GTAVNWVQMV GMEPGPDSAL FRTTAAA
Best Arabidopsis Sequence Match ( AT1G30490.1 )
(BLAST)
001: MMAHHSMDDR DSPDKGFDSG KYVRYTPEQV EALERVYAEC PKPSSLRRQQ LIRECPILCN IEPRQIKVWF QNRRCREKQR KESARLQTVN RKLSAMNKLL
101: MEENDRLQKQ VSNLVYENGF MKHRIHTASG TTTDNSCESV VVSGQQRQQQ NPTHQHPQRD VNNPANLLSI AEETLAEFLC KATGTAVDWV QMIGMKPGPD
201: SIGIVAVSRN CSGIAARACG LVSLEPMKVA EILKDRPSWF RDCRCVETLN VIPTGNGGTI ELVNTQIYAP TTLAAARDFW TLRYSTSLED GSYVVCERSL
301: TSATGGPNGP LSSSFVRAKM LSSGFLIRPC DGGGSIIHIV DHVDLDVSSV PEVLRPLYES SKILAQKMTV AALRHVRQIA QETSGEVQYS GGRQPAVLRT
401: FSQRLCRGFN DAVNGFVDDG WSPMSSDGGE DITIMINSSS AKFAGSQYGS SFLPSFGSGV LCAKASMLLQ NVPPLVLIRF LREHRAEWAD YGVDAYSAAS
501: LRATPYAVPC VRTGGFPSNQ VILPLAQTLE HEEFLEVVRL GGHAYSPEDM GLSRDMYLLQ LCSGVDENVV GGCAQLVFAP IDESFADDAP LLPSGFRVIP
601: LDQKTNPNDH QSASRTRDLA SSLDGSTKTD SETNSRLVLT IAFQFTFDNH SRDNVATMAR QYVRNVVGSI QRVALAITPR PGSMQLPTSP EALTLVRWIT
701: RSYSIHTGAD LFGADSQSCG GDTLLKQLWD HSDAILCCSL KTNASPVFTF ANQAGLDMLE TTLVALQDIM LDKTLDDSGR RALCSEFAKI MQQGYANLPA
801: GICVSSMGRP VSYEQATVWK VVDDNESNHC LAFTLVSWSF V
Arabidopsis Description
ATHB-9Homeobox-leucine zipper protein ATHB-9 [Source:UniProtKB/Swiss-Prot;Acc:O04292]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.