Factsheet for Zm00001d024060_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026325_P001	Maize	mitochondrion	23.18	63.53
Zm00001d018824_P001	Maize	cytosol	15.88	27.01
Zm00001d033246_P004	Maize	cytosol	33.48	9.11
Zm00001d013699_P001	Maize	cytosol	33.05	9.0
Zm00001d041489_P009	Maize	cytosol, nucleus, plastid	31.76	8.55
Zm00001d048527_P028	Maize	nucleus	30.47	8.39
Zm00001d027317_P015	Maize	nucleus	30.47	8.32
Zm00001d008869_P001	Maize	cytosol	30.47	8.28
Zm00001d032681_P004	Maize	cytosol, nucleus, plastid	30.9	8.26
Zm00001d031061_P007	Maize	mitochondrion	31.33	8.17
Zm00001d014252_P002	Maize	cytosol	5.58	7.47
Zm00001d049529_P001	Maize	cytosol, plastid	3.0	3.68

Protein Annotations

Gene3D:3.40.1120.10	MapMan:35.1	UniProt:A0A1D6IXK0	ProteinID:AQK40634.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0030529	InterPro:IPR024794	PFAM:PF00827
PANTHER:PTHR11847	PANTHER:PTHR11847:SF12	InterPro:Rbsml_L15e_core_dom_sf	InterPro:Ribosomal_L15e	InterPro:Ribosomal_L23/L15e_core_dom_sf	SUPFAM:SSF54189
UniParc:UPI000843EE7D	EnsemblPlantsGene:Zm00001d024060	EnsemblPlants:Zm00001d024060_P001	EnsemblPlants:Zm00001d024060_T001	SEG:seg	:

Description

Homeobox-leucine zipper protein REVOLUTA

Coordinates

chr10:-:40747708..40752335

Molecular Weight (calculated)

26206.1 Da

IEP (calculated)

10.323

GRAVY (calculated)

-0.242

Length

233 amino acids

Sequence
(BLAST)

001: MIGIFFLQRK SKTLKARRDM MIFQIWECQG FANFERFTTN KAGYAFIKYQ TKNQALATIE ALKGKYKIEP VAASRRQPPE MQILVSQTHP TTCPGPRRRP
101: KFSPSKGSSI CCFEKKELAS LVALTDQVSF FQYDSLLAIA EETLAEFLSK ATGTAVDWVQ MVEMKPGPDS IGIIAVSHNC SGVAAQPDQG LVPELQGYVV
201: YLVRVRRGGR KRPLPKYIIY GKPKHHGITQ LKF

Best Arabidopsis Sequence Match ( AT1G30490.1 )
(BLAST)

001: MMAHHSMDDR DSPDKGFDSG KYVRYTPEQV EALERVYAEC PKPSSLRRQQ LIRECPILCN IEPRQIKVWF QNRRCREKQR KESARLQTVN RKLSAMNKLL
101: MEENDRLQKQ VSNLVYENGF MKHRIHTASG TTTDNSCESV VVSGQQRQQQ NPTHQHPQRD VNNPANLLSI AEETLAEFLC KATGTAVDWV QMIGMKPGPD
201: SIGIVAVSRN CSGIAARACG LVSLEPMKVA EILKDRPSWF RDCRCVETLN VIPTGNGGTI ELVNTQIYAP TTLAAARDFW TLRYSTSLED GSYVVCERSL
301: TSATGGPNGP LSSSFVRAKM LSSGFLIRPC DGGGSIIHIV DHVDLDVSSV PEVLRPLYES SKILAQKMTV AALRHVRQIA QETSGEVQYS GGRQPAVLRT
401: FSQRLCRGFN DAVNGFVDDG WSPMSSDGGE DITIMINSSS AKFAGSQYGS SFLPSFGSGV LCAKASMLLQ NVPPLVLIRF LREHRAEWAD YGVDAYSAAS
501: LRATPYAVPC VRTGGFPSNQ VILPLAQTLE HEEFLEVVRL GGHAYSPEDM GLSRDMYLLQ LCSGVDENVV GGCAQLVFAP IDESFADDAP LLPSGFRVIP
601: LDQKTNPNDH QSASRTRDLA SSLDGSTKTD SETNSRLVLT IAFQFTFDNH SRDNVATMAR QYVRNVVGSI QRVALAITPR PGSMQLPTSP EALTLVRWIT
701: RSYSIHTGAD LFGADSQSCG GDTLLKQLWD HSDAILCCSL KTNASPVFTF ANQAGLDMLE TTLVALQDIM LDKTLDDSGR RALCSEFAKI MQQGYANLPA
801: GICVSSMGRP VSYEQATVWK VVDDNESNHC LAFTLVSWSF V

Arabidopsis Description

ATHB-9Homeobox-leucine zipper protein ATHB-9 [Source:UniProtKB/Swiss-Prot;Acc:O04292]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.