Factsheet for Zm00001d014252_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d001952_P001
Zm00001d006103_P001
Zm00001d026536_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32880.1	Zm00001d001952_P001	AT3G51180.1	21798944
AT4G32880.1	Zm00001d026536_P002	AT3G51180.1	21798944
AT4G32880.1	Zm00001d006103_P001	AT5G41070.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030088.1-P	Field mustard	mitochondrion	23.56	33.61
Zm00001d018824_P001	Maize	cytosol	18.97	24.09
PGSC0003DMT400074932	Potato	nucleus	34.48	11.36
CDY69514	Canola	nucleus	38.51	10.63
Zm00001d033246_P004	Maize	cytosol	49.43	10.05
Zm00001d013699_P001	Maize	cytosol	49.43	10.05
Zm00001d041489_P009	Maize	cytosol, nucleus, plastid	48.85	9.83
CDY51188	Canola	nucleus	40.23	9.71
Zm00001d031061_P007	Maize	mitochondrion	48.85	9.51
Bra014315.1-P	Field mustard	cytosol	44.25	9.23
CDY02553	Canola	cytosol	44.25	9.22
CDY28273	Canola	nucleus	39.08	9.21
CDY45021	Canola	nucleus	39.08	9.21
AT1G52150.2	Thale cress	cytosol	44.25	9.2
VIT_09s0002g03740.t01	Wine grape	cytosol	43.68	9.04
Bra018948.1-P	Field mustard	cytosol	43.1	8.95
CDY47819	Canola	cytosol	43.1	8.95
CDY60592	Canola	cytosol	43.1	8.95
Solyc08g066500.2.1	Tomato	cytosol	42.53	8.95
VIT_04s0008g03250.t01	Wine grape	cytosol	43.68	8.94
GSMUA_Achr5P06550_001	Banana	cytosol	43.1	8.94
AT4G32880.1	Thale cress	nucleus	42.53	8.88
PGSC0003DMT400068037	Potato	cytosol	42.53	8.84
Solyc12g044410.1.1	Tomato	nucleus	42.53	8.84
Bra011392.1-P	Field mustard	cytosol	41.95	8.76
PGSC0003DMT400006735	Potato	cytosol	41.95	8.74
Solyc03g120910.2.1	Tomato	cytosol	41.95	8.73
GSMUA_Achr8P20090_001	Banana	cytosol	41.95	8.71
PGSC0003DMT400074934	Potato	cytosol	41.95	8.7
Bra034539.1-P	Field mustard	nucleus	41.38	8.65
Zm00001d008869_P001	Maize	cytosol	40.23	8.16
Zm00001d048527_P028	Maize	nucleus	37.93	7.8
Zm00001d027317_P015	Maize	nucleus	37.36	7.62
Zm00001d032681_P004	Maize	cytosol, nucleus, plastid	35.63	7.11
Zm00001d024060_P001	Maize	mitochondrion	7.47	5.58
Zm00001d026325_P001	Maize	mitochondrion	2.3	4.71
Os01t0200300-01	Rice	cytosol, peroxisome	9.77	3.94
KRH33388	Soybean	cytosol	2.3	3.85
CDX68901	Canola	plastid	3.45	2.97
Zm00001d049529_P001	Maize	cytosol, plastid	1.72	1.58
Os06t0722650-01	Rice	extracellular, mitochondrion, plastid	1.15	1.29
Os06t0722300-01	Rice	extracellular, mitochondrion, plastid	1.15	1.29
Os06t0720500-01	Rice	extracellular, mitochondrion, plastid	1.15	1.29

Protein Annotations

Gene3D:3.40.1120.10	MapMan:35.1	UniProt:A0A1D6GR79	ProteinID:AQK65617.1	ProteinID:AQK65618.1	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0030529
InterPro:IPR024794	PFAM:PF00827	PANTHER:PTHR11847	PANTHER:PTHR11847:SF12	InterPro:Rbsml_L15e_core_dom_sf	InterPro:Ribosomal_L15e
InterPro:Ribosomal_L23/L15e_core_dom_sf	SUPFAM:SSF54189	UniParc:UPI0002211BEC	EnsemblPlantsGene:Zm00001d014252	EnsemblPlants:Zm00001d014252_P002	EnsemblPlants:Zm00001d014252_T002
SEG:seg	:	:	:	:	:

Description

Homeobox-leucine zipper protein ATHB-15

Coordinates

chr5:-:38188359..38192535

Molecular Weight (calculated)

19965.8 Da

IEP (calculated)

10.778

GRAVY (calculated)

-0.845

Length

174 amino acids

Sequence
(BLAST)

001: MRCREKQRKV ASRLQTVNQK LAAMNKLLME ENDRLQKQPS AATTDTSCES VVTSGQHHQQ QNPAVPCPQR DANNPARVTI ESNMNCCRLG ANGWDEAWSG
101: FHWNHRCFAQ LQWRSRPSRS RSGSRTAPAY SWDVCFHGYV VYLVRVRRGG RKRPLPKCII YGNPKHQGIT QLKF

Best Arabidopsis Sequence Match ( AT1G30490.1 )
(BLAST)

001: MMAHHSMDDR DSPDKGFDSG KYVRYTPEQV EALERVYAEC PKPSSLRRQQ LIRECPILCN IEPRQIKVWF QNRRCREKQR KESARLQTVN RKLSAMNKLL
101: MEENDRLQKQ VSNLVYENGF MKHRIHTASG TTTDNSCESV VVSGQQRQQQ NPTHQHPQRD VNNPANLLSI AEETLAEFLC KATGTAVDWV QMIGMKPGPD
201: SIGIVAVSRN CSGIAARACG LVSLEPMKVA EILKDRPSWF RDCRCVETLN VIPTGNGGTI ELVNTQIYAP TTLAAARDFW TLRYSTSLED GSYVVCERSL
301: TSATGGPNGP LSSSFVRAKM LSSGFLIRPC DGGGSIIHIV DHVDLDVSSV PEVLRPLYES SKILAQKMTV AALRHVRQIA QETSGEVQYS GGRQPAVLRT
401: FSQRLCRGFN DAVNGFVDDG WSPMSSDGGE DITIMINSSS AKFAGSQYGS SFLPSFGSGV LCAKASMLLQ NVPPLVLIRF LREHRAEWAD YGVDAYSAAS
501: LRATPYAVPC VRTGGFPSNQ VILPLAQTLE HEEFLEVVRL GGHAYSPEDM GLSRDMYLLQ LCSGVDENVV GGCAQLVFAP IDESFADDAP LLPSGFRVIP
601: LDQKTNPNDH QSASRTRDLA SSLDGSTKTD SETNSRLVLT IAFQFTFDNH SRDNVATMAR QYVRNVVGSI QRVALAITPR PGSMQLPTSP EALTLVRWIT
701: RSYSIHTGAD LFGADSQSCG GDTLLKQLWD HSDAILCCSL KTNASPVFTF ANQAGLDMLE TTLVALQDIM LDKTLDDSGR RALCSEFAKI MQQGYANLPA
801: GICVSSMGRP VSYEQATVWK VVDDNESNHC LAFTLVSWSF V

Arabidopsis Description

ATHB-9Homeobox-leucine zipper protein ATHB-9 [Source:UniProtKB/Swiss-Prot;Acc:O04292]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.