Factsheet for Solyc03g120910.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400006735	Potato	cytosol	99.4	99.52
Solyc12g044410.1.1	Tomato	nucleus	87.2	87.1
VIT_09s0002g03740.t01	Wine grape	cytosol	86.36	85.85
KRH47223	Soybean	nucleus	85.17	84.96
KRH44288	Soybean	nucleus	84.81	84.61
AT1G52150.2	Thale cress	cytosol	83.97	83.87
CDY47819	Canola	cytosol	83.73	83.53
CDY60592	Canola	cytosol	83.73	83.53
CDY02553	Canola	cytosol	83.37	83.47
KRH47225	Soybean	cytosol	83.85	83.35
Bra018948.1-P	Field mustard	cytosol	83.49	83.29
Bra014315.1-P	Field mustard	cytosol	82.78	82.97
KRH58026	Soybean	cytosol	23.21	82.55
KRH44292	Soybean	cytosol	82.18	80.82
CDY51188	Canola	nucleus	69.38	80.44
Solyc08g066500.2.1	Tomato	cytosol	79.43	80.29
GSMUA_Achr5P06550_001	Banana	cytosol	74.28	74.02
GSMUA_Achr8P20090_001	Banana	cytosol	73.92	73.75
EES00115	Sorghum	cytosol, nucleus, plastid	68.06	67.42
HORVU3Hr1G026990.3	Barley	cytosol, nucleus, plastid	67.34	66.63
Solyc11g069470.1.1	Tomato	cytosol, nucleus, plastid	66.75	66.35
Zm00001d008869_P001	Maize	cytosol	67.11	65.38
Solyc02g024070.2.1	Tomato	cytosol, nucleus, plastid	65.91	64.75
Os06t0720500-01	Rice	extracellular, mitochondrion, plastid	11.96	64.52
Os06t0722300-01	Rice	extracellular, mitochondrion, plastid	11.96	64.52
Os06t0722650-01	Rice	extracellular, mitochondrion, plastid	11.96	64.52
TraesCS3A01G312800.1	Wheat	nucleus	66.99	64.07
Solyc02g069830.2.1	Tomato	nucleus	64.0	63.54
TraesCS3D01G141500.2	Wheat	nucleus	66.99	63.49
TraesCS3B01G159100.2	Wheat	cytosol, nucleus, plastid	66.51	63.47
Os01t0200300-01	Rice	cytosol, peroxisome	30.38	58.93
Bra030088.1-P	Field mustard	mitochondrion	8.49	58.2
Zm00001d014252_P002	Maize	cytosol	8.73	41.95
Solyc01g057960.1.1	Tomato	plastid	6.46	39.13

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.2	Gene3D:3.30.530.20	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0008289	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR002913	InterPro:IPR023393
UniProt:K4BMP0	InterPro:MEKHLA	PFAM:PF00046	PFAM:PF01852	PFAM:PF08670	PFscan:PS50071
PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF217	SMART:SM00234	SMART:SM00389	SUPFAM:SSF46689
SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	EnsemblPlantsGene:Solyc03g120910.2	EnsemblPlants:Solyc03g120910.2.1	UniParc:UPI0002766F4D
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:69142797..69149731

Molecular Weight (calculated)

92011.6 Da

IEP (calculated)

6.467

GRAVY (calculated)

-0.126

Length

836 amino acids

Sequence
(BLAST)

001: MASCKDGKSV VLDNGKYVRY TPEQVEALER LYHDCPKPSS MRRQQLIREC PILSNIEPKQ IKVWFQNRRC REKQRKEASR LQSVNRKLTA MNKLLMEEND
101: RLQKQVSQLV YENGYFRRQS HSTPLATKDT SCDSVVTSGQ HHLTSQHPPR DASPAGLLSI AEETLTEFLS KATGTAVEWV QMPGMKPGPD SIGIIAISHG
201: CTGVAARACG LVGLEPTRVS EILKDRPSWY RDCRVVEVLN VLPTANGGTI ELLYMQLYAP TTLAPARDFW LLRYTTVMDD GSLVVCERSL GNTQNGPSMP
301: PVQNFVRAEI LPSGYLIRPC EGGGSIIHIV DHMNLEAWSV PEVLRPLYES SAVLAQKTTV AALRYLRQIA QEVSQTNVTN WGRRPAALRA LSQRLSRGFN
401: EALNGIADEG WSMLDSDGMD DVTILVNSSP DKLMGLNLPF ANGFSPMSNA VMCAKASMLL QNVPPAILLR FLREHRSEWA DNNIDAYAAA AIKVGPCSLP
501: GARVGNFGGQ VILPLAHTVE HEELLEVIKL EGHSPEDAIM PRDMFLLQLC SGMDENAVGT CAELVFAPID ASFADDAPLL PSGFRIISLE SGKEASSPNR
601: TLDLTSALET GPAENKAAND LHTSGGSSRS VMTIAFQFAF ESHMQESVAS MARQYVRSII SSVQRVALAL SPSHLGSHGG LRLPLGTPEA HTLARWICQS
701: YRCFLGVELL KLNTDQGSES ILKSLWHHSD AIICCSAKAL PVFTFANQAG LDMLETTLVA LQDITLEKIF DDHGKKNLCT EFPQIMQQGF ACLQGGICLS
801: SMSRPISYER AVAWKVMNEE DTAHCICFMF VNWSFV

Best Arabidopsis Sequence Match ( AT1G52150.1 )
(BLAST)

001: MAMSCKDGKL GCLDNGKYVR YTPEQVEALE RLYHDCPKPS SIRRQQLIRE CPILSNIEPK QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN
101: DRLQKQVSQL VHENSYFRQH TPNPSLPAKD TSCESVVTSG QHQLASQNPQ RDASPAGLLS IAEETLAEFL SKATGTAVEW VQMPGMKPGP DSIGIIAISH
201: GCTGVAARAC GLVGLEPTRV AEIVKDRPSW FRECRAVEVM NVLPTANGGT VELLYMQLYA PTTLAPPRDF WLLRYTSVLE DGSLVVCERS LKSTQNGPSM
301: PLVQNFVRAE MLSSGYLIRP CDGGGSIIHI VDHMDLEACS VPEVLRPLYE SPKVLAQKTT MAALRQLKQI AQEVTQTNSS VNGWGRRPAA LRALSQRLSR
401: GFNEAVNGFT DEGWSVIGDS MDDVTITVNS SPDKLMGLNL TFANGFAPVS NVVLCAKASM LLQNVPPAIL LRFLREHRSE WADNNIDAYL AAAVKVGPCS
501: ARVGGFGGQV ILPLAHTIEH EEFMEVIKLE GLGHSPEDAI VPRDIFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL DSAKEVSSPN
601: RTLDLASALE IGSAGTKAST DQSGNSTCAR SVMTIAFEFG IESHMQEHVA SMARQYVRGI ISSVQRVALA LSPSHISSQV GLRTPLGTPE AQTLARWICQ
701: SYRGYMGVEL LKSNSDGNES ILKNLWHHTD AIICCSMKAL PVFTFANQAG LDMLETTLVA LQDISLEKIF DDNGRKTLCS EFPQIMQQGF ACLQGGICLS
801: SMGRPVSYER AVAWKVLNEE ENAHCICFVF INWSFV

Arabidopsis Description

ATHB-15Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Source:UniProtKB/TrEMBL;Acc:B3H4G8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.