CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44288	Soybean	nucleus	95.96	96.3
KRH47223	Soybean	nucleus	95.6	95.94
KRH44292	Soybean	cytosol	93.94	92.94
KRH58026	Soybean	cytosol	25.09	89.79
VIT_09s0002g03740.t01	Wine grape	cytosol	87.16	87.16
AT1G52150.2	Thale cress	cytosol	83.71	84.11
PGSC0003DMT400006735	Potato	cytosol	83.47	84.07
Solyc03g120910.2.1	Tomato	cytosol	83.35	83.85
CDY02553	Canola	cytosol	83.23	83.83
CDY60592	Canola	cytosol	83.47	83.77
Bra014315.1-P	Field mustard	cytosol	82.88	83.57
CDY47819	Canola	cytosol	83.12	83.41
Bra018948.1-P	Field mustard	cytosol	83.12	83.41
Solyc12g044410.1.1	Tomato	nucleus	80.97	81.36
PGSC0003DMT400068037	Potato	cytosol	80.86	81.24
CDY51188	Canola	nucleus	69.44	81.0
KRH62081	Soybean	cytosol	78.6	78.32
KRH52763	Soybean	cytosol	78.48	78.11
KRH11775	Soybean	cytosol, nucleus, plastid	66.71	66.31
KRH36781	Soybean	cytosol, nucleus, plastid	67.06	66.2
KRH29910	Soybean	cytosol, nucleus, plastid	64.33	64.25
KRH25015	Soybean	cytosol, nucleus, plastid	63.85	63.85
KRH43001	Soybean	cytosol	63.61	63.02
KRH59117	Soybean	cytosol	63.61	62.72
Bra030088.1-P	Field mustard	mitochondrion	9.04	62.3
KRH33388	Soybean	cytosol	5.11	41.35

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100775524	MapMan:15.5.3.2	Gene3D:3.30.530.20	EMBL:ACUP02004142	ncoils:Coil
EnsemblPlantsGene:GLYMA_07G016700	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008289	InterPro:Homeobox-like_sf	InterPro:Homeobox_dom
UniProt:I1KGK2	InterPro:IPR001356	InterPro:IPR002913	InterPro:IPR023393	EnsemblPlants:KRH47225	ProteinID:KRH47225
ProteinID:KRH47225.1	InterPro:MEKHLA	PFAM:PF00046	PFAM:PF01852	PFAM:PF08670	PFscan:PS50071
PFscan:PS50848	PANTHER:PTHR24326	PANTHER:PTHR24326:SF217	SMART:SM00234	SMART:SM00389	SUPFAM:SSF46689
SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI0002337DAA	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:1343519..1350422

Molecular Weight (calculated)

92952.4 Da

IEP (calculated)

6.539

GRAVY (calculated)

-0.180

Length

841 amino acids

Sequence
(BLAST)

001: MSCKDGSRNG IGMDNGKYVR YTPEQVEALE RLYHDCPKPS SIRRQQLIRE CPILSNIEPK QIKVWFQNRR CREKQRKESS RLQAVNRKLT AMNKLLMEEN
101: DRLQKQVSQL VYENGYFRQH TTQNTKQQPT KDTSCESAVT SGQQHNLTTQ HPPRDASPAG LLSIAEETLA EFLSKATGTA VEWVQMPGMK PGPDSIGIVA
201: ISHSCTGVAA RACGLVGLEP TRVAEILKDR PLWFQDCRAV DVLNVLPTAN GGTIELLYMQ LYAPTTLAPA RDFWLLRYTS VLEDGSLVIC ERSLKNTQNG
301: PSMPPVQHFV RAEMLPSGYL IRPCEGGGSI IHIVDHMNLE PWSVPEVLRP LYESSTVLAQ KTSIVALRHL RQISHEVSQS NVTGWGRRPA ALRALSQRLS
401: RGFNEALNGF TDEGWTTIGN DGVDDVTILV NSSPDKLMGL NLSFANGFPS VSNAVLCAKA SMLLQNVPPA ILLRFLREHR SEWADNNMDA YTAAAIKVGP
501: CSLSGSRVGN YGGQVILPLA HTIEHEEFLE VIKLEGIAHS PEDTIMPREM FLLQLCSGMD ENAVGTCAEL ISAPIDASFA DDAPLLPSGF RIIPLESGKE
601: ASSPNRTLDL ASALDIGSSG NRASNECAGN SSYMRSVMTI AFEFAFESHM QEHVASMARQ YVRSIISSVQ RVALALSPSH LSSHAGLRSP LGTPEAQTLA
701: HWICNSYRCY LGVELLKSNN EGNESLLKSL WHHSDAILCC TLKALPVFTF SNQAGLDMLE TTLVALQDTP LEKIFDDHGR KILFSEFPQI IQQGFVCLQG
801: GICLSSMGRP VSYERVVAWK VLNEEENAHC MCFMFMNWSF V

Best Arabidopsis Sequence Match ( AT1G52150.1 )
(BLAST)

001: MAMSCKDGKL GCLDNGKYVR YTPEQVEALE RLYHDCPKPS SIRRQQLIRE CPILSNIEPK QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN
101: DRLQKQVSQL VHENSYFRQH TPNPSLPAKD TSCESVVTSG QHQLASQNPQ RDASPAGLLS IAEETLAEFL SKATGTAVEW VQMPGMKPGP DSIGIIAISH
201: GCTGVAARAC GLVGLEPTRV AEIVKDRPSW FRECRAVEVM NVLPTANGGT VELLYMQLYA PTTLAPPRDF WLLRYTSVLE DGSLVVCERS LKSTQNGPSM
301: PLVQNFVRAE MLSSGYLIRP CDGGGSIIHI VDHMDLEACS VPEVLRPLYE SPKVLAQKTT MAALRQLKQI AQEVTQTNSS VNGWGRRPAA LRALSQRLSR
401: GFNEAVNGFT DEGWSVIGDS MDDVTITVNS SPDKLMGLNL TFANGFAPVS NVVLCAKASM LLQNVPPAIL LRFLREHRSE WADNNIDAYL AAAVKVGPCS
501: ARVGGFGGQV ILPLAHTIEH EEFMEVIKLE GLGHSPEDAI VPRDIFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL DSAKEVSSPN
601: RTLDLASALE IGSAGTKAST DQSGNSTCAR SVMTIAFEFG IESHMQEHVA SMARQYVRGI ISSVQRVALA LSPSHISSQV GLRTPLGTPE AQTLARWICQ
701: SYRGYMGVEL LKSNSDGNES ILKNLWHHTD AIICCSMKAL PVFTFANQAG LDMLETTLVA LQDISLEKIF DDNGRKTLCS EFPQIMQQGF ACLQGGICLS
801: SMGRPVSYER AVAWKVLNEE ENAHCICFVF INWSFV

Arabidopsis Description

ATHB-15Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Source:UniProtKB/TrEMBL;Acc:B3H4G8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.