Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU93425 | Sorghum | nucleus | 97.19 | 98.46 |
| Zm00001d048527_P028 | Maize | nucleus | 95.19 | 95.98 |
| Os03t0109400-02 | Rice | nucleus | 89.68 | 91.18 |
| TraesCS4D01G359600.1 | Wheat | nucleus | 85.11 | 86.63 |
| HORVU4Hr1G090030.9 | Barley | nucleus | 84.99 | 86.52 |
| TraesCS4B01G385200.1 | Wheat | nucleus | 84.99 | 86.41 |
| TraesCS5A01G549700.1 | Wheat | nucleus | 83.94 | 85.44 |
| HORVU5Hr1G061410.29 | Barley | cytosol | 27.9 | 82.35 |
| Zm00001d032681_P004 | Maize | cytosol, nucleus, plastid | 78.31 | 76.61 |
| GSMUA_Achr5P18530_001 | Banana | cytosol, nucleus, plastid | 73.62 | 75.3 |
| Zm00001d049529_P001 | Maize | cytosol, plastid | 16.18 | 72.63 |
| KRH29910 | Soybean | cytosol, nucleus, plastid | 71.04 | 71.97 |
| VIT_06s0004g02800.t01 | Wine grape | nucleus | 70.69 | 71.45 |
| KRH25015 | Soybean | cytosol, nucleus, plastid | 69.64 | 70.63 |
| AT5G60690.1 | Thale cress | cytosol, nucleus, plastid | 67.64 | 68.53 |
| Solyc11g069470.1.1 | Tomato | cytosol, nucleus, plastid | 67.53 | 68.49 |
| CDY31519 | Canola | cytosol, nucleus, plastid | 68.0 | 68.24 |
| Bra002458.1-P | Field mustard | cytosol, nucleus, plastid | 68.0 | 68.24 |
| CDY52706 | Canola | cytosol, nucleus, plastid | 67.64 | 68.12 |
| PGSC0003DMT400020801 | Potato | cytosol, nucleus, plastid | 66.94 | 67.9 |
| CDX99164 | Canola | cytosol, nucleus, plastid | 65.53 | 66.63 |
| Bra038295.1-P | Field mustard | cytosol, nucleus, plastid | 64.83 | 66.39 |
| Zm00001d033246_P004 | Maize | cytosol | 66.47 | 66.24 |
| Zm00001d013699_P001 | Maize | cytosol | 66.47 | 66.24 |
| Bra020236.1-P | Field mustard | nucleus | 65.65 | 66.19 |
| CDY09191 | Canola | cytosol | 57.44 | 65.77 |
| VIT_13s0019g04320.t01 | Wine grape | nucleus | 62.84 | 63.73 |
| CDY31032 | Canola | cytosol | 56.51 | 62.92 |
| CDY31031 | Canola | extracellular | 7.74 | 61.68 |
| Zm00001d041489_P009 | Maize | cytosol, nucleus, plastid | 60.61 | 59.77 |
| Zm00001d008869_P001 | Maize | cytosol | 58.15 | 57.81 |
| Zm00001d031061_P007 | Maize | mitochondrion | 60.14 | 57.38 |
| CDY27014 | Canola | cytosol, plasma membrane | 4.81 | 54.67 |
| CDY57624 | Canola | extracellular | 5.74 | 52.69 |
| Zm00001d026325_P001 | Maize | mitochondrion | 5.16 | 51.76 |
| Zm00001d018824_P001 | Maize | cytosol | 6.92 | 43.07 |
| CDX82038 | Canola | extracellular | 7.85 | 41.36 |
| Zm00001d014252_P002 | Maize | cytosol | 7.62 | 37.36 |
| Zm00001d024060_P001 | Maize | mitochondrion | 8.32 | 30.47 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100037826 | MapMan:15.5.3.2 | Gene3D:3.30.530.20 | UniProt:A0A1D6JKQ5 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008289 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR002913 | InterPro:IPR023393 | InterPro:MEKHLA | ProteinID:ONL92748.1 | PFAM:PF00046 | PFAM:PF01852 |
| PFAM:PF08670 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF326 | SMART:SM00234 |
| SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI000844D217 |
| EnsemblPlantsGene:Zm00001d027317 | EnsemblPlants:Zm00001d027317_P015 | EnsemblPlants:Zm00001d027317_T015 | SEG:seg | : | : |
Description
rolled leaf2 rolled leaf2
Coordinates
chr1:+:2819249..2826448
Molecular Weight (calculated)
93498.3 Da
IEP (calculated)
6.245
GRAVY (calculated)
-0.097
Length
853 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAVAMRGG SSDSGGFDKV PGMDSGKYVR YTPEQVEVLE RLYIDCPKPS SSRRQQLLRE CPILSNIEPK QIKVWFQNRR CRDKQRKESS RLQAVNRKLT
101: AMNKLLMEEN ERLQKQVSQL VHENAHMRQQ LQNTSLANDT SCESNVTAPP NAIRDASNPS GLLAIAEETF TEFLSKATGT AIDWVQMPGM KVISQLSILV
201: LSLKPGPDSV GIVAISHGCR GVAARACGLV NLEPTKVIEI LKDRPSWFRD CRSLEVFTMF PAGNGGTIEL IYMQMYAPTT LVPARDFWTL RYTTTMEDGS
301: LVVCERSLTG SGGGPNAASA QQFVRAEMLP SGYLVRPCEG GGSIVHIVDH LDLEAWSVPE VLRPLYESSR VVAQKMTTVA LRHLRQIAQE TSGEVVYALG
401: RQPAVLRTFS QRLSRGFNDA ISGFNDDGWS VMGGDGIEDV VVACNSTKKI RNNSNAGITF GAPGGIICAK ASMLLQSVPP AVLVRFLREH RSEWADYNID
501: AYLASSLKTS ACSLPGLRPM RFSGGQMIMP LAHTVENEEI LEVVRLEGQP LTHDEALLSR DIHLLQLCTG IDEKSVGSSF QLVFAPIDEH FPDDAPLISS
601: GFRVIPLDMK TDGVSSGRTL DLASSLDVGS AAPQASGDAP PDDCNLRSVL TIAFQFPYEM HLQDSVATMA RQYVRSVVSA VQRVSMAISP SQSGLNAGQR
701: MLSGFPEAAT LARWVCQSYH YHLGVELLNQ SDEAGEALLK MLWHHPDAVL CCSFKEKPMF TFANKAGLDM LETSLIALQD LTLDKIFDES GRKAIFSDIS
801: KLMEQGYAYL PSGVCMSGMG RHVSFDQAVA WKVLGEDSSV HCLAFCFVNW SFV
101: AMNKLLMEEN ERLQKQVSQL VHENAHMRQQ LQNTSLANDT SCESNVTAPP NAIRDASNPS GLLAIAEETF TEFLSKATGT AIDWVQMPGM KVISQLSILV
201: LSLKPGPDSV GIVAISHGCR GVAARACGLV NLEPTKVIEI LKDRPSWFRD CRSLEVFTMF PAGNGGTIEL IYMQMYAPTT LVPARDFWTL RYTTTMEDGS
301: LVVCERSLTG SGGGPNAASA QQFVRAEMLP SGYLVRPCEG GGSIVHIVDH LDLEAWSVPE VLRPLYESSR VVAQKMTTVA LRHLRQIAQE TSGEVVYALG
401: RQPAVLRTFS QRLSRGFNDA ISGFNDDGWS VMGGDGIEDV VVACNSTKKI RNNSNAGITF GAPGGIICAK ASMLLQSVPP AVLVRFLREH RSEWADYNID
501: AYLASSLKTS ACSLPGLRPM RFSGGQMIMP LAHTVENEEI LEVVRLEGQP LTHDEALLSR DIHLLQLCTG IDEKSVGSSF QLVFAPIDEH FPDDAPLISS
601: GFRVIPLDMK TDGVSSGRTL DLASSLDVGS AAPQASGDAP PDDCNLRSVL TIAFQFPYEM HLQDSVATMA RQYVRSVVSA VQRVSMAISP SQSGLNAGQR
701: MLSGFPEAAT LARWVCQSYH YHLGVELLNQ SDEAGEALLK MLWHHPDAVL CCSFKEKPMF TFANKAGLDM LETSLIALQD LTLDKIFDES GRKAIFSDIS
801: KLMEQGYAYL PSGVCMSGMG RHVSFDQAVA WKVLGEDSSV HCLAFCFVNW SFV
001: MAMSCKDGKL GCLDNGKYVR YTPEQVEALE RLYHDCPKPS SIRRQQLIRE CPILSNIEPK QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN
101: DRLQKQVSQL VHENSYFRQH TPNPSLPAKD TSCESVVTSG QHQLASQNPQ RDASPAGLLS IAEETLAEFL SKATGTAVEW VQMPGMKPGP DSIGIIAISH
201: GCTGVAARAC GLVGLEPTRV AEIVKDRPSW FRECRAVEVM NVLPTANGGT VELLYMQLYA PTTLAPPRDF WLLRYTSVLE DGSLVVCERS LKSTQNGPSM
301: PLVQNFVRAE MLSSGYLIRP CDGGGSIIHI VDHMDLEACS VPEVLRPLYE SPKVLAQKTT MAALRQLKQI AQEVTQTNSS VNGWGRRPAA LRALSQRLSR
401: GFNEAVNGFT DEGWSVIGDS MDDVTITVNS SPDKLMGLNL TFANGFAPVS NVVLCAKASM LLQNVPPAIL LRFLREHRSE WADNNIDAYL AAAVKVGPCS
501: ARVGGFGGQV ILPLAHTIEH EEFMEVIKLE GLGHSPEDAI VPRDIFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL DSAKEVSSPN
601: RTLDLASALE IGSAGTKAST DQSGNSTCAR SVMTIAFEFG IESHMQEHVA SMARQYVRGI ISSVQRVALA LSPSHISSQV GLRTPLGTPE AQTLARWICQ
701: SYRGYMGVEL LKSNSDGNES ILKNLWHHTD AIICCSMKAL PVFTFANQAG LDMLETTLVA LQDISLEKIF DDNGRKTLCS EFPQIMQQGF ACLQGGICLS
801: SMGRPVSYER AVAWKVLNEE ENAHCICFVF INWSFV
101: DRLQKQVSQL VHENSYFRQH TPNPSLPAKD TSCESVVTSG QHQLASQNPQ RDASPAGLLS IAEETLAEFL SKATGTAVEW VQMPGMKPGP DSIGIIAISH
201: GCTGVAARAC GLVGLEPTRV AEIVKDRPSW FRECRAVEVM NVLPTANGGT VELLYMQLYA PTTLAPPRDF WLLRYTSVLE DGSLVVCERS LKSTQNGPSM
301: PLVQNFVRAE MLSSGYLIRP CDGGGSIIHI VDHMDLEACS VPEVLRPLYE SPKVLAQKTT MAALRQLKQI AQEVTQTNSS VNGWGRRPAA LRALSQRLSR
401: GFNEAVNGFT DEGWSVIGDS MDDVTITVNS SPDKLMGLNL TFANGFAPVS NVVLCAKASM LLQNVPPAIL LRFLREHRSE WADNNIDAYL AAAVKVGPCS
501: ARVGGFGGQV ILPLAHTIEH EEFMEVIKLE GLGHSPEDAI VPRDIFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL DSAKEVSSPN
601: RTLDLASALE IGSAGTKAST DQSGNSTCAR SVMTIAFEFG IESHMQEHVA SMARQYVRGI ISSVQRVALA LSPSHISSQV GLRTPLGTPE AQTLARWICQ
701: SYRGYMGVEL LKSNSDGNES ILKNLWHHTD AIICCSMKAL PVFTFANQAG LDMLETTLVA LQDISLEKIF DDNGRKTLCS EFPQIMQQGF ACLQGGICLS
801: SMGRPVSYER AVAWKVLNEE ENAHCICFVF INWSFV
Arabidopsis Description
ATHB-15Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Source:UniProtKB/TrEMBL;Acc:B3H4G8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.