Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra038295.1-P | Field mustard | cytosol, nucleus, plastid | 97.62 | 98.32 |
CDY31031 | Canola | extracellular | 12.04 | 94.39 |
CDY31032 | Canola | cytosol | 81.88 | 89.69 |
CDY52706 | Canola | cytosol, nucleus, plastid | 84.74 | 83.94 |
CDY31519 | Canola | cytosol, nucleus, plastid | 84.74 | 83.65 |
CDY09191 | Canola | cytosol | 71.51 | 80.54 |
KRH29910 | Soybean | cytosol, nucleus, plastid | 78.19 | 77.91 |
KRH25015 | Soybean | cytosol, nucleus, plastid | 77.12 | 76.93 |
VIT_06s0004g02800.t01 | Wine grape | nucleus | 77.0 | 76.54 |
Solyc11g069470.1.1 | Tomato | cytosol, nucleus, plastid | 75.09 | 74.91 |
PGSC0003DMT400020801 | Potato | cytosol, nucleus, plastid | 73.9 | 73.72 |
HORVU5Hr1G061410.29 | Barley | cytosol | 24.08 | 69.9 |
GSMUA_Achr5P18530_001 | Banana | cytosol, nucleus, plastid | 67.7 | 68.11 |
CDY27014 | Canola | cytosol, plasma membrane | 6.08 | 68.0 |
Os10t0480200-01 | Rice | nucleus | 67.58 | 67.5 |
TraesCS1A01G157500.1 | Wheat | nucleus | 67.22 | 67.14 |
TraesCS1B01G173900.1 | Wheat | nucleus | 67.22 | 67.14 |
HORVU1Hr1G041790.2 | Barley | nucleus | 67.1 | 67.02 |
TraesCS1D01G155200.3 | Wheat | nucleus | 66.87 | 66.95 |
OQU93425 | Sorghum | nucleus | 66.98 | 66.75 |
CDX71242 | Canola | peroxisome | 6.67 | 66.67 |
EER94065 | Sorghum | nucleus | 66.39 | 66.47 |
Zm00001d048527_P028 | Maize | nucleus | 66.98 | 66.43 |
Os03t0109400-02 | Rice | nucleus | 66.15 | 66.15 |
TraesCS4D01G359600.1 | Wheat | nucleus | 65.55 | 65.63 |
CDY57624 | Canola | extracellular | 7.27 | 65.59 |
Zm00001d027317_P015 | Maize | nucleus | 66.63 | 65.53 |
CDY43661 | Canola | cytosol | 63.29 | 65.31 |
TraesCS5A01G549700.1 | Wheat | nucleus | 65.08 | 65.16 |
HORVU4Hr1G090030.9 | Barley | nucleus | 64.96 | 65.04 |
TraesCS4B01G385200.1 | Wheat | nucleus | 64.96 | 64.96 |
CDY09572 | Canola | cytosol, nucleus, plastid | 64.36 | 64.29 |
CDY31635 | Canola | nucleus | 64.96 | 64.19 |
CDY02297 | Canola | nucleus | 64.24 | 64.17 |
CDX84286 | Canola | cytosol | 64.48 | 63.72 |
Zm00001d032681_P004 | Maize | cytosol, nucleus, plastid | 64.6 | 62.16 |
CDY69514 | Canola | nucleus | 44.82 | 59.68 |
CDY47819 | Canola | cytosol | 59.48 | 59.55 |
CDY60592 | Canola | cytosol | 59.36 | 59.43 |
CDY02553 | Canola | cytosol | 59.12 | 59.4 |
CDY45021 | Canola | nucleus | 51.97 | 59.08 |
CDY28273 | Canola | nucleus | 51.85 | 58.94 |
CDY51188 | Canola | nucleus | 50.06 | 58.25 |
CDX68901 | Canola | plastid | 13.83 | 57.43 |
CDX82038 | Canola | extracellular | 9.42 | 48.77 |
CDY53980 | Canola | cytosol, nucleus, peroxisome | 8.82 | 47.74 |
Zm00001d049529_P001 | Maize | cytosol, plastid | 10.13 | 44.74 |
Os03t0769800-01 | Rice | plastid | 4.77 | 16.53 |
Os10t0147300-02 | Rice | plastid | 0.83 | 6.42 |
Protein Annotations
Gene3D:1.10.10.60 | MapMan:15.5.3.2 | Gene3D:3.30.530.20 | GO:A0A078EEC3 | EnsemblPlants:CDX99164 | ProteinID:CDX99164 |
ProteinID:CDX99164.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
GO:GO:0008289 | EnsemblPlantsGene:GSBRNA2T00107329001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 |
InterPro:IPR023393 | InterPro:MEKHLA | PFAM:PF00046 | PFAM:PF01852 | PFAM:PF08670 | PFscan:PS50071 |
PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF279 | SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 |
SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI0004EF0E8A | SEG:seg | : |
Description
BnaA06g18550D
Coordinates
chrLK031908:+:847484..851707
Molecular Weight (calculated)
92239.3 Da
IEP (calculated)
5.754
GRAVY (calculated)
-0.102
Length
839 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVAVGNRHE SGENINRHLD SSGKYVRYTG EQVEALERVY SECPKPTSLR RQQLIRECPF LANIEPKQIK VWFQNRRCRD KQRKEASRLQ SVNQKLSAMN
101: KLLMEENDRL QKQVSHLVSE NGYMQQQLTL TTLGTDASCD SVDPTPPLHP LRDANSPAGL MAIAEETLAE FLSKATGTAV DWVQMPGMKP GPDSVGIFAI
201: SQKCYGVAAR ACGLVSLEPM KIVEILKDRP SWFRDCRSIE VFTMFPAGNG GTIELIYMQT YAPTTLAPAR DFWTLRYTTS LEKGSIVVCE RSLSGSGAGP
301: NATSAAQFVR AEMLPSGYLI RPCDGGGSII HIVDHINFEG WSVPDVLRLL YESSKVVAQR MTIAALRYVR QVAHETNGEV VYGLGRQPAV LRTFSQRLSR
401: GFSDAVNGFN DDGWSIMHCN GAEDITVAVN STKHLNSFSD PLSFLGGVLC AKASMLLQNV CPAVLVRFLR EHRSEWADFN VDAYSAATLK AGAFAYSGMR
501: PTTFTGSQII MPLGNTIEKE EMLEVVRLEG HSLVPEDSFL SRDVHLLQIC TGIDEDVVGA CSELVFAPVN EMFPDDAPLV PSGFRVIPVD SKTGDAQDLL
601: TANHRTLDLT SSQDVGSTPE TGSSPSSRCI LTIAFQFPFE NNLQENVANM ACQYVRSVIS SVQRVAVALS PSGLIPIPGS KLSPGSPEAV SLAIWICQSY
701: KQHFGSDLLR TDSLGGDALL RQLWDHQDAI LCCSLKPQPV FMFANQAGLD MLETTLVALQ DIALEKIFDE SGRKALCPDF AKLMQQGFAC LPSGMCVSTM
801: GRHVSYEQAV SWKVFSDCED NNNNRIHCLA FLFANWSFL
101: KLLMEENDRL QKQVSHLVSE NGYMQQQLTL TTLGTDASCD SVDPTPPLHP LRDANSPAGL MAIAEETLAE FLSKATGTAV DWVQMPGMKP GPDSVGIFAI
201: SQKCYGVAAR ACGLVSLEPM KIVEILKDRP SWFRDCRSIE VFTMFPAGNG GTIELIYMQT YAPTTLAPAR DFWTLRYTTS LEKGSIVVCE RSLSGSGAGP
301: NATSAAQFVR AEMLPSGYLI RPCDGGGSII HIVDHINFEG WSVPDVLRLL YESSKVVAQR MTIAALRYVR QVAHETNGEV VYGLGRQPAV LRTFSQRLSR
401: GFSDAVNGFN DDGWSIMHCN GAEDITVAVN STKHLNSFSD PLSFLGGVLC AKASMLLQNV CPAVLVRFLR EHRSEWADFN VDAYSAATLK AGAFAYSGMR
501: PTTFTGSQII MPLGNTIEKE EMLEVVRLEG HSLVPEDSFL SRDVHLLQIC TGIDEDVVGA CSELVFAPVN EMFPDDAPLV PSGFRVIPVD SKTGDAQDLL
601: TANHRTLDLT SSQDVGSTPE TGSSPSSRCI LTIAFQFPFE NNLQENVANM ACQYVRSVIS SVQRVAVALS PSGLIPIPGS KLSPGSPEAV SLAIWICQSY
701: KQHFGSDLLR TDSLGGDALL RQLWDHQDAI LCCSLKPQPV FMFANQAGLD MLETTLVALQ DIALEKIFDE SGRKALCPDF AKLMQQGFAC LPSGMCVSTM
801: GRHVSYEQAV SWKVFSDCED NNNNRIHCLA FLFANWSFL
001: MEMAVANHRE RSSDSMNRHL DSSGKYVRYT AEQVEALERV YAECPKPSSL RRQQLIRECS ILANIEPKQI KVWFQNRRCR DKQRKEASRL QSVNRKLSAM
101: NKLLMEENDR LQKQVSQLVC ENGYMKQQLT TVVNDPSCES VVTTPQHSLR DANSPAGLLS IAEETLAEFL SKATGTAVDW VQMPGMKPGP DSVGIFAISQ
201: RCNGVAARAC GLVSLEPMKI AEILKDRPSW FRDCRSLEVF TMFPAGNGGT IELVYMQTYA PTTLAPARDF WTLRYTTSLD NGSFVVCERS LSGSGAGPNA
301: ASASQFVRAE MLSSGYLIRP CDGGGSIIHI VDHLNLEAWS VPDVLRPLYE SSKVVAQKMT ISALRYIRQL AQESNGEVVY GLGRQPAVLR TFSQRLSRGF
401: NDAVNGFGDD GWSTMHCDGA EDIIVAINST KHLNNISNSL SFLGGVLCAK ASMLLQNVPP AVLIRFLREH RSEWADFNVD AYSAATLKAG SFAYPGMRPT
501: RFTGSQIIMP LGHTIEHEEM LEVVRLEGHS LAQEDAFMSR DVHLLQICTG IDENAVGACS ELIFAPINEM FPDDAPLVPS GFRVIPVDAK TGDVQDLLTA
601: NHRTLDLTSS LEVGPSPENA SGNSFSSSSS RCILTIAFQF PFENNLQENV AGMACQYVRS VISSVQRVAM AISPSGISPS LGSKLSPGSP EAVTLAQWIS
701: QSYSHHLGSE LLTIDSLGSD DSVLKLLWDH QDAILCCSLK PQPVFMFANQ AGLDMLETTL VALQDITLEK IFDESGRKAI CSDFAKLMQQ GFACLPSGIC
801: VSTMGRHVSY EQAVAWKVFA ASEENNNNLH CLAFSFVNWS FV
101: NKLLMEENDR LQKQVSQLVC ENGYMKQQLT TVVNDPSCES VVTTPQHSLR DANSPAGLLS IAEETLAEFL SKATGTAVDW VQMPGMKPGP DSVGIFAISQ
201: RCNGVAARAC GLVSLEPMKI AEILKDRPSW FRDCRSLEVF TMFPAGNGGT IELVYMQTYA PTTLAPARDF WTLRYTTSLD NGSFVVCERS LSGSGAGPNA
301: ASASQFVRAE MLSSGYLIRP CDGGGSIIHI VDHLNLEAWS VPDVLRPLYE SSKVVAQKMT ISALRYIRQL AQESNGEVVY GLGRQPAVLR TFSQRLSRGF
401: NDAVNGFGDD GWSTMHCDGA EDIIVAINST KHLNNISNSL SFLGGVLCAK ASMLLQNVPP AVLIRFLREH RSEWADFNVD AYSAATLKAG SFAYPGMRPT
501: RFTGSQIIMP LGHTIEHEEM LEVVRLEGHS LAQEDAFMSR DVHLLQICTG IDENAVGACS ELIFAPINEM FPDDAPLVPS GFRVIPVDAK TGDVQDLLTA
601: NHRTLDLTSS LEVGPSPENA SGNSFSSSSS RCILTIAFQF PFENNLQENV AGMACQYVRS VISSVQRVAM AISPSGISPS LGSKLSPGSP EAVTLAQWIS
701: QSYSHHLGSE LLTIDSLGSD DSVLKLLWDH QDAILCCSLK PQPVFMFANQ AGLDMLETTL VALQDITLEK IFDESGRKAI CSDFAKLMQQ GFACLPSGIC
801: VSTMGRHVSY EQAVAWKVFA ASEENNNNLH CLAFSFVNWS FV
Arabidopsis Description
REVHomeobox-leucine zipper protein REVOLUTA [Source:UniProtKB/Swiss-Prot;Acc:Q9SE43]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.