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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra038295.1-P Field mustard cytosol, nucleus, plastid 97.62 98.32
CDY31031 Canola extracellular 12.04 94.39
CDY31032 Canola cytosol 81.88 89.69
CDY52706 Canola cytosol, nucleus, plastid 84.74 83.94
CDY31519 Canola cytosol, nucleus, plastid 84.74 83.65
CDY09191 Canola cytosol 71.51 80.54
KRH29910 Soybean cytosol, nucleus, plastid 78.19 77.91
KRH25015 Soybean cytosol, nucleus, plastid 77.12 76.93
VIT_06s0004g02800.t01 Wine grape nucleus 77.0 76.54
Solyc11g069470.1.1 Tomato cytosol, nucleus, plastid 75.09 74.91
PGSC0003DMT400020801 Potato cytosol, nucleus, plastid 73.9 73.72
HORVU5Hr1G061410.29 Barley cytosol 24.08 69.9
GSMUA_Achr5P18530_001 Banana cytosol, nucleus, plastid 67.7 68.11
CDY27014 Canola cytosol, plasma membrane 6.08 68.0
Os10t0480200-01 Rice nucleus 67.58 67.5
TraesCS1A01G157500.1 Wheat nucleus 67.22 67.14
TraesCS1B01G173900.1 Wheat nucleus 67.22 67.14
HORVU1Hr1G041790.2 Barley nucleus 67.1 67.02
TraesCS1D01G155200.3 Wheat nucleus 66.87 66.95
OQU93425 Sorghum nucleus 66.98 66.75
CDX71242 Canola peroxisome 6.67 66.67
EER94065 Sorghum nucleus 66.39 66.47
Zm00001d048527_P028 Maize nucleus 66.98 66.43
Os03t0109400-02 Rice nucleus 66.15 66.15
TraesCS4D01G359600.1 Wheat nucleus 65.55 65.63
CDY57624 Canola extracellular 7.27 65.59
Zm00001d027317_P015 Maize nucleus 66.63 65.53
CDY43661 Canola cytosol 63.29 65.31
TraesCS5A01G549700.1 Wheat nucleus 65.08 65.16
HORVU4Hr1G090030.9 Barley nucleus 64.96 65.04
TraesCS4B01G385200.1 Wheat nucleus 64.96 64.96
CDY09572 Canola cytosol, nucleus, plastid 64.36 64.29
CDY31635 Canola nucleus 64.96 64.19
CDY02297 Canola nucleus 64.24 64.17
CDX84286 Canola cytosol 64.48 63.72
Zm00001d032681_P004 Maize cytosol, nucleus, plastid 64.6 62.16
CDY69514 Canola nucleus 44.82 59.68
CDY47819 Canola cytosol 59.48 59.55
CDY60592 Canola cytosol 59.36 59.43
CDY02553 Canola cytosol 59.12 59.4
CDY45021 Canola nucleus 51.97 59.08
CDY28273 Canola nucleus 51.85 58.94
CDY51188 Canola nucleus 50.06 58.25
CDX68901 Canola plastid 13.83 57.43
CDX82038 Canola extracellular 9.42 48.77
CDY53980 Canola cytosol, nucleus, peroxisome 8.82 47.74
Zm00001d049529_P001 Maize cytosol, plastid 10.13 44.74
Os03t0769800-01 Rice plastid 4.77 16.53
Os10t0147300-02 Rice plastid 0.83 6.42
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.3.2Gene3D:3.30.530.20GO:A0A078EEC3EnsemblPlants:CDX99164ProteinID:CDX99164
ProteinID:CDX99164.1ncoils:CoilGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488
GO:GO:0008289EnsemblPlantsGene:GSBRNA2T00107329001InterPro:Homeobox-like_sfInterPro:Homeobox_domInterPro:IPR001356InterPro:IPR002913
InterPro:IPR023393InterPro:MEKHLAPFAM:PF00046PFAM:PF01852PFAM:PF08670PFscan:PS50071
PFscan:PS50848PANTHER:PTHR24326PANTHER:PTHR24326:SF279SMART:SM00234SMART:SM00389SUPFAM:SSF46689
SUPFAM:SSF55961InterPro:START-like_dom_sfInterPro:START_lipid-bd_domUniParc:UPI0004EF0E8ASEG:seg:
Description
BnaA06g18550D
Coordinates
chrLK031908:+:847484..851707
Molecular Weight (calculated)
92239.3 Da
IEP (calculated)
5.754
GRAVY (calculated)
-0.102
Length
839 amino acids
Sequence
(BLAST)
001: MAVAVGNRHE SGENINRHLD SSGKYVRYTG EQVEALERVY SECPKPTSLR RQQLIRECPF LANIEPKQIK VWFQNRRCRD KQRKEASRLQ SVNQKLSAMN
101: KLLMEENDRL QKQVSHLVSE NGYMQQQLTL TTLGTDASCD SVDPTPPLHP LRDANSPAGL MAIAEETLAE FLSKATGTAV DWVQMPGMKP GPDSVGIFAI
201: SQKCYGVAAR ACGLVSLEPM KIVEILKDRP SWFRDCRSIE VFTMFPAGNG GTIELIYMQT YAPTTLAPAR DFWTLRYTTS LEKGSIVVCE RSLSGSGAGP
301: NATSAAQFVR AEMLPSGYLI RPCDGGGSII HIVDHINFEG WSVPDVLRLL YESSKVVAQR MTIAALRYVR QVAHETNGEV VYGLGRQPAV LRTFSQRLSR
401: GFSDAVNGFN DDGWSIMHCN GAEDITVAVN STKHLNSFSD PLSFLGGVLC AKASMLLQNV CPAVLVRFLR EHRSEWADFN VDAYSAATLK AGAFAYSGMR
501: PTTFTGSQII MPLGNTIEKE EMLEVVRLEG HSLVPEDSFL SRDVHLLQIC TGIDEDVVGA CSELVFAPVN EMFPDDAPLV PSGFRVIPVD SKTGDAQDLL
601: TANHRTLDLT SSQDVGSTPE TGSSPSSRCI LTIAFQFPFE NNLQENVANM ACQYVRSVIS SVQRVAVALS PSGLIPIPGS KLSPGSPEAV SLAIWICQSY
701: KQHFGSDLLR TDSLGGDALL RQLWDHQDAI LCCSLKPQPV FMFANQAGLD MLETTLVALQ DIALEKIFDE SGRKALCPDF AKLMQQGFAC LPSGMCVSTM
801: GRHVSYEQAV SWKVFSDCED NNNNRIHCLA FLFANWSFL
Best Arabidopsis Sequence Match ( AT5G60690.1 )
(BLAST)
001: MEMAVANHRE RSSDSMNRHL DSSGKYVRYT AEQVEALERV YAECPKPSSL RRQQLIRECS ILANIEPKQI KVWFQNRRCR DKQRKEASRL QSVNRKLSAM
101: NKLLMEENDR LQKQVSQLVC ENGYMKQQLT TVVNDPSCES VVTTPQHSLR DANSPAGLLS IAEETLAEFL SKATGTAVDW VQMPGMKPGP DSVGIFAISQ
201: RCNGVAARAC GLVSLEPMKI AEILKDRPSW FRDCRSLEVF TMFPAGNGGT IELVYMQTYA PTTLAPARDF WTLRYTTSLD NGSFVVCERS LSGSGAGPNA
301: ASASQFVRAE MLSSGYLIRP CDGGGSIIHI VDHLNLEAWS VPDVLRPLYE SSKVVAQKMT ISALRYIRQL AQESNGEVVY GLGRQPAVLR TFSQRLSRGF
401: NDAVNGFGDD GWSTMHCDGA EDIIVAINST KHLNNISNSL SFLGGVLCAK ASMLLQNVPP AVLIRFLREH RSEWADFNVD AYSAATLKAG SFAYPGMRPT
501: RFTGSQIIMP LGHTIEHEEM LEVVRLEGHS LAQEDAFMSR DVHLLQICTG IDENAVGACS ELIFAPINEM FPDDAPLVPS GFRVIPVDAK TGDVQDLLTA
601: NHRTLDLTSS LEVGPSPENA SGNSFSSSSS RCILTIAFQF PFENNLQENV AGMACQYVRS VISSVQRVAM AISPSGISPS LGSKLSPGSP EAVTLAQWIS
701: QSYSHHLGSE LLTIDSLGSD DSVLKLLWDH QDAILCCSLK PQPVFMFANQ AGLDMLETTL VALQDITLEK IFDESGRKAI CSDFAKLMQQ GFACLPSGIC
801: VSTMGRHVSY EQAVAWKVFA ASEENNNNLH CLAFSFVNWS FV
Arabidopsis Description
REVHomeobox-leucine zipper protein REVOLUTA [Source:UniProtKB/Swiss-Prot;Acc:Q9SE43]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.