Factsheet for Os10t0480200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G173900.1	Wheat	nucleus	92.14	92.14
TraesCS1A01G157500.1	Wheat	nucleus	92.14	92.14
HORVU1Hr1G041790.2	Barley	nucleus	91.79	91.79
TraesCS1D01G155200.3	Wheat	nucleus	91.43	91.65
EER94065	Sorghum	nucleus	86.67	86.87
Os03t0109400-02	Rice	nucleus	86.31	86.41
Zm00001d032681_P004	Maize	cytosol, nucleus, plastid	82.14	79.13
GSMUA_Achr5P18530_001	Banana	cytosol, nucleus, plastid	76.67	77.22
VIT_06s0004g02800.t01	Wine grape	nucleus	73.21	72.87
KRH29910	Soybean	cytosol, nucleus, plastid	72.98	72.8
KRH25015	Soybean	cytosol, nucleus, plastid	71.67	71.58
CDY52706	Canola	cytosol, nucleus, plastid	70.71	70.13
Bra002458.1-P	Field mustard	cytosol, nucleus, plastid	70.95	70.12
CDY31519	Canola	cytosol, nucleus, plastid	70.95	70.12
Solyc11g069470.1.1	Tomato	cytosol, nucleus, plastid	70.12	70.04
AT5G60690.1	Thale cress	cytosol, nucleus, plastid	70.12	69.95
PGSC0003DMT400020801	Potato	cytosol, nucleus, plastid	69.52	69.44
Bra038295.1-P	Field mustard	cytosol, nucleus, plastid	67.02	67.59
CDX99164	Canola	cytosol, nucleus, plastid	67.5	67.58
Bra020236.1-P	Field mustard	nucleus	67.98	67.49
CDY09191	Canola	cytosol	59.64	67.25
Os03t0640800-01	Rice	plastid	68.57	67.05
VIT_13s0019g04320.t01	Wine grape	nucleus	65.71	65.64
Os12t0612700-01	Rice	nucleus	65.6	64.44
CDY31032	Canola	cytosol	58.21	63.84
CDY27014	Canola	cytosol, plasma membrane	5.48	61.33
CDY31031	Canola	extracellular	7.62	59.81
Os06t0722650-01	Rice	extracellular, mitochondrion, plastid	10.71	58.06
Os06t0722300-01	Rice	extracellular, mitochondrion, plastid	10.71	58.06
Os06t0720500-01	Rice	extracellular, mitochondrion, plastid	10.71	58.06
CDY57624	Canola	extracellular	6.31	56.99
Os01t0200300-01	Rice	cytosol, peroxisome	24.88	48.49
CDX82038	Canola	extracellular	8.33	43.21
Os03t0769800-01	Rice	plastid	4.52	15.7
Os10t0147300-02	Rice	plastid	0.83	6.42

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.2	Gene3D:3.30.530.20	EntrezGene:4348919	ProteinID:AAK21338.1	ProteinID:AAP54299.1
ProteinID:ABB47795.1	EMBL:AK102603	EMBL:AY423716	EMBL:AY554037	ProteinID:BAF26787.1	ProteinID:BAT11330.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0008289	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR002913	InterPro:IPR023393	InterPro:MEKHLA	EnsemblPlantsGene:Os10g0480200
EnsemblPlants:Os10t0480200-01	PFAM:PF00046	PFAM:PF01852	PFAM:PF08670	PFscan:PS50071	PFscan:PS50848
PANTHER:PTHR24326	PANTHER:PTHR24326:SF326	UniProt:Q9AV49	SMART:SM00234	SMART:SM00389	SUPFAM:SSF46689
SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI000009FF5B	RefSeq:XP_015614901.1	SEG:seg

Description

HOMEOBOX GENE 9Similar to Rolled leaf1. (Os10t0480200-01);Similar to Rolled leaf1. (Os10t0480200-02);Similar to Homeobox-leucine zipper protein HOX9. (Os10t0480200-03)

Coordinates

chr10:+:18085539..18092497

Molecular Weight (calculated)

92137.4 Da

IEP (calculated)

5.594

GRAVY (calculated)

-0.149

Length

840 amino acids

Sequence
(BLAST)

001: MAAAVAMRSG SGSDGGGGGY DKAGMDSGKY VRYTPEQVEA LERVYAECPK PSSSRRQQLL RDCPILANIE PKQIKVWFQN RRCRDKQRKE ASRLQAVNRK
101: LTAMNKLLME ENERLQKQVS QLVHENAYMK QQLQNPSLGN DTSCESNVTT PQNPLRDASN PSGLLTIAEE TLTEFLSKAT GTAVDWVPMP GMKPGPDSFG
201: IVAVSHGCRG VAARACGLVN LEPTKIVEIL KDRPSWFRDC RSLEVFTMFP AGNGGTIELV YMQMYAPTTL VPARDFWTLR YTTTMEDGSL VVCERSLSGS
301: GGGPSTASAQ QFVRAEMLPS GYLVRPCEGG GSIVHIVDHL DLEAWSVPEV LRPLYESSRV VAQKMTTAAL RHIRQIAQET SGEVVYALGR QPAVLRTFSQ
401: RLSRGFNDAI SGFNDDGWSV MGGDGIEDVI IACNAKKVRN TSTSANAFVT PGGVICAKAS MLLQSVPPAV LVRFLREHRS EWADYNFDAY SASSLKTSSC
501: SLPGLRPMRF SGSQIIMPLA HTVENEEILE VVRLEGQALT HDDGLMSRDI HLLQLCTGID EKSMGSCFQL VSAPIDELFP DDAPLISSGF RVIPLDMKTD
601: GTPAGRTLDL ASSLEVGSTA QPTGDASMDD CNLRSVLTIA FQFPYEMHLQ DSVATMARQY VRSIVSSVQR VSMAISPSRS GLNAGQKIIS GFPEAPTLAR
701: WICQSYQFHL GVELLRQADD AGEALLKMLW DYEDAILCCS FKEKPVFTFA NEMGLNMLET SLVALQDLSL DKIFDEAGRK ALYNEIPKLM EQGYVYLPGG
801: VCLSGMGRHV SFEQAVAWKV LGEDNNVHCL AFCFVNWSFV

Best Arabidopsis Sequence Match ( AT5G60690.1 )
(BLAST)

001: MEMAVANHRE RSSDSMNRHL DSSGKYVRYT AEQVEALERV YAECPKPSSL RRQQLIRECS ILANIEPKQI KVWFQNRRCR DKQRKEASRL QSVNRKLSAM
101: NKLLMEENDR LQKQVSQLVC ENGYMKQQLT TVVNDPSCES VVTTPQHSLR DANSPAGLLS IAEETLAEFL SKATGTAVDW VQMPGMKPGP DSVGIFAISQ
201: RCNGVAARAC GLVSLEPMKI AEILKDRPSW FRDCRSLEVF TMFPAGNGGT IELVYMQTYA PTTLAPARDF WTLRYTTSLD NGSFVVCERS LSGSGAGPNA
301: ASASQFVRAE MLSSGYLIRP CDGGGSIIHI VDHLNLEAWS VPDVLRPLYE SSKVVAQKMT ISALRYIRQL AQESNGEVVY GLGRQPAVLR TFSQRLSRGF
401: NDAVNGFGDD GWSTMHCDGA EDIIVAINST KHLNNISNSL SFLGGVLCAK ASMLLQNVPP AVLIRFLREH RSEWADFNVD AYSAATLKAG SFAYPGMRPT
501: RFTGSQIIMP LGHTIEHEEM LEVVRLEGHS LAQEDAFMSR DVHLLQICTG IDENAVGACS ELIFAPINEM FPDDAPLVPS GFRVIPVDAK TGDVQDLLTA
601: NHRTLDLTSS LEVGPSPENA SGNSFSSSSS RCILTIAFQF PFENNLQENV AGMACQYVRS VISSVQRVAM AISPSGISPS LGSKLSPGSP EAVTLAQWIS
701: QSYSHHLGSE LLTIDSLGSD DSVLKLLWDH QDAILCCSLK PQPVFMFANQ AGLDMLETTL VALQDITLEK IFDESGRKAI CSDFAKLMQQ GFACLPSGIC
801: VSTMGRHVSY EQAVAWKVFA ASEENNNNLH CLAFSFVNWS FV

Arabidopsis Description

REVHomeobox-leucine zipper protein REVOLUTA [Source:UniProtKB/Swiss-Prot;Acc:Q9SE43]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.