Factsheet for Os03t0769800-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27014	Canola	cytosol, plasma membrane	2.07	6.67
CDY31031	Canola	extracellular	2.89	6.54
Os06t0722650-01	Rice	extracellular, mitochondrion, plastid	4.13	6.45
Os06t0722300-01	Rice	extracellular, mitochondrion, plastid	4.13	6.45
Os06t0720500-01	Rice	extracellular, mitochondrion, plastid	4.13	6.45
CDY31032	Canola	cytosol	16.12	5.09
AT5G60690.1	Thale cress	cytosol, nucleus, plastid	17.36	4.99
CDY52706	Canola	cytosol, nucleus, plastid	17.36	4.96
CDY31519	Canola	cytosol, nucleus, plastid	17.36	4.94
Bra002458.1-P	Field mustard	cytosol, nucleus, plastid	17.36	4.94
Bra038295.1-P	Field mustard	cytosol, nucleus, plastid	16.94	4.92
Bra020236.1-P	Field mustard	nucleus	16.94	4.85
CDY09191	Canola	cytosol	14.88	4.83
CDX99164	Canola	cytosol, nucleus, plastid	16.53	4.77
Solyc11g069470.1.1	Tomato	cytosol, nucleus, plastid	16.53	4.76
VIT_06s0004g02800.t01	Wine grape	nucleus	16.12	4.62
Os03t0640800-01	Rice	plastid	16.12	4.54
Os10t0480200-01	Rice	nucleus	15.7	4.52
KRH25015	Soybean	cytosol, nucleus, plastid	15.7	4.52
PGSC0003DMT400020801	Potato	cytosol, nucleus, plastid	15.7	4.52
KRH29910	Soybean	cytosol, nucleus, plastid	15.7	4.51
CDY57624	Canola	extracellular	1.65	4.3
Os03t0109400-02	Rice	nucleus	14.88	4.29
VIT_13s0019g04320.t01	Wine grape	nucleus	14.88	4.28
Os12t0612700-01	Rice	nucleus	14.88	4.21
CDX82038	Canola	extracellular	2.48	3.7
Os01t0200300-01	Rice	cytosol, peroxisome	4.96	2.78
Os10t0147300-02	Rice	plastid	0.41	0.92

Protein Annotations

Gene3D:1.10.10.60	MapMan:35.1	ProteinID:AAT85055.1	ProteinID:ABF99079.1	EMBL:AK100250	ProteinID:BAF13313.1
ProteinID:BAS86583.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0016020	GO:GO:0016021	InterPro:Homeobox-like_sf
InterPro:Homeobox_dom	InterPro:IPR001356	EnsemblPlantsGene:Os03g0769800	EnsemblPlants:Os03t0769800-01	PFAM:PF00046	PANTHER:PTHR24326
PANTHER:PTHR24326:SF156	UniProt:Q6AU46	SUPFAM:SSF46689	UniParc:UPI00004014E1	SEG:seg	:

Description

Similar to Homeodomain-leucine zipper protein interfascicular fiberless 1 (Revoluta). (Os03t0769800-01)

Coordinates

chr3:+:31869151..31871497

Molecular Weight (calculated)

26690.9 Da

IEP (calculated)

9.635

GRAVY (calculated)

-0.383

Length

242 amino acids

Sequence
(BLAST)

001: MPFPHGGVGP AACAGLPYVF PRRRVASPSS PPQLPNRSPL NSRPLLSTWN TMTVAAEVDA SPDGEERRKQ ACNRTTIYRF LPSFSFFFLS FVSPSHMSGY
101: FFSSSSPDDF TFARNLSGCC CVEGGEGGNF GGGGGRSGGW RQRWRCPMRS GSGSDGSGYD KAGMDSGKYV HYTPGQVEAL ERVYAECPKP RFSRRQQLLC
201: ELSILANIEP KQKIKVWFPK QKVSKSMQGY TIKLVCLLCV WL

Best Arabidopsis Sequence Match ( AT1G30490.1 )
(BLAST)

001: MMAHHSMDDR DSPDKGFDSG KYVRYTPEQV EALERVYAEC PKPSSLRRQQ LIRECPILCN IEPRQIKVWF QNRRCREKQR KESARLQTVN RKLSAMNKLL
101: MEENDRLQKQ VSNLVYENGF MKHRIHTASG TTTDNSCESV VVSGQQRQQQ NPTHQHPQRD VNNPANLLSI AEETLAEFLC KATGTAVDWV QMIGMKPGPD
201: SIGIVAVSRN CSGIAARACG LVSLEPMKVA EILKDRPSWF RDCRCVETLN VIPTGNGGTI ELVNTQIYAP TTLAAARDFW TLRYSTSLED GSYVVCERSL
301: TSATGGPNGP LSSSFVRAKM LSSGFLIRPC DGGGSIIHIV DHVDLDVSSV PEVLRPLYES SKILAQKMTV AALRHVRQIA QETSGEVQYS GGRQPAVLRT
401: FSQRLCRGFN DAVNGFVDDG WSPMSSDGGE DITIMINSSS AKFAGSQYGS SFLPSFGSGV LCAKASMLLQ NVPPLVLIRF LREHRAEWAD YGVDAYSAAS
501: LRATPYAVPC VRTGGFPSNQ VILPLAQTLE HEEFLEVVRL GGHAYSPEDM GLSRDMYLLQ LCSGVDENVV GGCAQLVFAP IDESFADDAP LLPSGFRVIP
601: LDQKTNPNDH QSASRTRDLA SSLDGSTKTD SETNSRLVLT IAFQFTFDNH SRDNVATMAR QYVRNVVGSI QRVALAITPR PGSMQLPTSP EALTLVRWIT
701: RSYSIHTGAD LFGADSQSCG GDTLLKQLWD HSDAILCCSL KTNASPVFTF ANQAGLDMLE TTLVALQDIM LDKTLDDSGR RALCSEFAKI MQQGYANLPA
801: GICVSSMGRP VSYEQATVWK VVDDNESNHC LAFTLVSWSF V

Arabidopsis Description

ATHB-9Homeobox-leucine zipper protein ATHB-9 [Source:UniProtKB/Swiss-Prot;Acc:O04292]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.