Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99164 | Canola | cytosol, nucleus, plastid | 89.69 | 81.88 |
| CDY52706 | Canola | cytosol, nucleus, plastid | 80.68 | 72.96 |
| CDY31519 | Canola | cytosol, nucleus, plastid | 80.94 | 72.94 |
| HORVU5Hr1G061410.29 | Barley | cytosol | 25.85 | 68.51 |
| CDY09191 | Canola | cytosol | 66.19 | 68.05 |
| KRH29910 | Soybean | cytosol, nucleus, plastid | 74.41 | 67.7 |
| VIT_06s0004g02800.t01 | Wine grape | nucleus | 73.37 | 66.59 |
| KRH25015 | Soybean | cytosol, nucleus, plastid | 73.11 | 66.59 |
| Solyc11g069470.1.1 | Tomato | cytosol, nucleus, plastid | 71.93 | 65.52 |
| PGSC0003DMT400020801 | Potato | cytosol, nucleus, plastid | 71.15 | 64.8 |
| GSMUA_Achr5P18530_001 | Banana | cytosol, nucleus, plastid | 65.01 | 59.71 |
| TraesCS1B01G173900.1 | Wheat | nucleus | 63.97 | 58.33 |
| HORVU1Hr1G041790.2 | Barley | nucleus | 63.97 | 58.33 |
| TraesCS1A01G157500.1 | Wheat | nucleus | 63.97 | 58.33 |
| TraesCS1D01G155200.3 | Wheat | nucleus | 63.71 | 58.23 |
| Os10t0480200-01 | Rice | nucleus | 63.84 | 58.21 |
| CDY69514 | Canola | nucleus | 47.78 | 58.1 |
| OQU93425 | Sorghum | nucleus | 63.19 | 57.48 |
| CDY51188 | Canola | nucleus | 54.05 | 57.42 |
| EER94065 | Sorghum | nucleus | 62.79 | 57.4 |
| Os03t0109400-02 | Rice | nucleus | 62.79 | 57.33 |
| Zm00001d048527_P028 | Maize | nucleus | 63.05 | 57.09 |
| CDY45021 | Canola | nucleus | 54.96 | 57.05 |
| CDY28273 | Canola | nucleus | 54.83 | 56.91 |
| TraesCS4D01G359600.1 | Wheat | nucleus | 61.88 | 56.56 |
| Zm00001d027317_P015 | Maize | nucleus | 62.92 | 56.51 |
| TraesCS4B01G385200.1 | Wheat | nucleus | 61.49 | 56.14 |
| HORVU4Hr1G090030.9 | Barley | nucleus | 61.36 | 56.09 |
| TraesCS5A01G549700.1 | Wheat | nucleus | 61.23 | 55.97 |
| CDY43661 | Canola | cytosol | 59.4 | 55.97 |
| CDY31635 | Canola | nucleus | 60.7 | 54.77 |
| CDX84286 | Canola | cytosol | 60.18 | 54.3 |
| CDY02297 | Canola | nucleus | 59.53 | 54.29 |
| CDY09572 | Canola | cytosol, nucleus, plastid | 59.4 | 54.17 |
| Zm00001d032681_P004 | Maize | cytosol, nucleus, plastid | 60.57 | 53.21 |
| CDY47819 | Canola | cytosol | 56.14 | 51.31 |
| CDY60592 | Canola | cytosol | 56.01 | 51.19 |
| CDY02553 | Canola | cytosol | 55.61 | 51.02 |
| Zm00001d049529_P001 | Maize | cytosol, plastid | 10.44 | 42.11 |
| CDX68901 | Canola | plastid | 7.05 | 26.73 |
| CDY53980 | Canola | cytosol, nucleus, peroxisome | 3.92 | 19.35 |
| Os03t0769800-01 | Rice | plastid | 5.09 | 16.12 |
| CDX82038 | Canola | extracellular | 3.13 | 14.81 |
| CDX71242 | Canola | peroxisome | 1.04 | 9.52 |
| CDY31031 | Canola | extracellular | 1.04 | 7.48 |
| Os10t0147300-02 | Rice | plastid | 0.91 | 6.42 |
| CDY57624 | Canola | extracellular | 0.65 | 5.38 |
| CDY27014 | Canola | cytosol, plasma membrane | 0.26 | 2.67 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.2 | Gene3D:3.30.530.20 | GO:A0A078H0Q4 | UniProt:A0A078H0Q4 | EnsemblPlants:CDY31032 |
| ProteinID:CDY31032 | ProteinID:CDY31032.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008289 |
| EnsemblPlantsGene:GSBRNA2T00047098001 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR002913 | InterPro:IPR023393 |
| PFAM:PF00046 | PFAM:PF01852 | PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF279 |
| SMART:SM00234 | SMART:SM00389 | SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom |
| UniParc:UPI0004EE06AD | : | : | : | : | : |
Description
BnaC03g55030DBnaC03g55030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0Q4]
Coordinates
chrLK032266:-:458538..462506
Molecular Weight (calculated)
84212.9 Da
IEP (calculated)
6.407
GRAVY (calculated)
-0.117
Length
766 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMTVAVANR HESGDNINRH LDSSGKYVRY TAEQVEALER VYSECPKPTS LRRQQLIREC SFLANIEPKQ IKVWFQNRRC RDKQRKEASR LQSVNQKLSA
101: MNKLLMEEND RLQKQVSHLV SENGYMKQQL TLTTVGTDAS CDSVDPTPPH HPLTDANSPA GLIAIAEETL AEFLSKATGT AVDWVQMPGM KPGPDSVGIF
201: AISQKCNGVA ARACGLVSLE PMKIVEILKD RPSWFRDCRS LEVFTMFPSG NCGTIELIYM QTYAPTTLAP ARDFWTLRYT TSLENGSFVV CERSLSGSGA
301: GPNATSAAQF AKAEMLPSGY LIRPCDGGCS IIHIVDHINF EGWSVPDVLR PLYESSKVVA QRMTIAALRY VRQVAHETNG EVVYGLGRQP AVLRTFSQRL
401: SRGFNDAVNG FNDDGWSIMH CNGAEDITVA VNSTKNLNSF SDPLSFLGGV LCAKASMLLH NVCPAVLIRF LREHRSEWAD FNVDAYSAAT LKAGAFAYSR
501: MRPTTFTGSQ IIMPLGNTIE KEEMLEVVRL EGHSLVPEDS FLTRDVHLLQ ICTGIDEDAV GACSELVFAP VNEMFPDDAP LVPSGFRVIP VDAKTVGDAQ
601: DLLTANHQTL DLTSSQDVGS TPETGSNLST RCILTIAFQF PFENNLQDNV ANMACQYVRS VISSVQRVAV ALSPSVLIPI PGSKLSPGSP EAVSLAIWIC
701: QSYKQHFGSD LLRTDSLGEY RVRVLGPVNP LPTACVTQRS LCVIHEFERK NKIDVTGLLQ IVPKMM
101: MNKLLMEEND RLQKQVSHLV SENGYMKQQL TLTTVGTDAS CDSVDPTPPH HPLTDANSPA GLIAIAEETL AEFLSKATGT AVDWVQMPGM KPGPDSVGIF
201: AISQKCNGVA ARACGLVSLE PMKIVEILKD RPSWFRDCRS LEVFTMFPSG NCGTIELIYM QTYAPTTLAP ARDFWTLRYT TSLENGSFVV CERSLSGSGA
301: GPNATSAAQF AKAEMLPSGY LIRPCDGGCS IIHIVDHINF EGWSVPDVLR PLYESSKVVA QRMTIAALRY VRQVAHETNG EVVYGLGRQP AVLRTFSQRL
401: SRGFNDAVNG FNDDGWSIMH CNGAEDITVA VNSTKNLNSF SDPLSFLGGV LCAKASMLLH NVCPAVLIRF LREHRSEWAD FNVDAYSAAT LKAGAFAYSR
501: MRPTTFTGSQ IIMPLGNTIE KEEMLEVVRL EGHSLVPEDS FLTRDVHLLQ ICTGIDEDAV GACSELVFAP VNEMFPDDAP LVPSGFRVIP VDAKTVGDAQ
601: DLLTANHQTL DLTSSQDVGS TPETGSNLST RCILTIAFQF PFENNLQDNV ANMACQYVRS VISSVQRVAV ALSPSVLIPI PGSKLSPGSP EAVSLAIWIC
701: QSYKQHFGSD LLRTDSLGEY RVRVLGPVNP LPTACVTQRS LCVIHEFERK NKIDVTGLLQ IVPKMM
001: MEMAVANHRE RSSDSMNRHL DSSGKYVRYT AEQVEALERV YAECPKPSSL RRQQLIRECS ILANIEPKQI KVWFQNRRCR DKQRKEASRL QSVNRKLSAM
101: NKLLMEENDR LQKQVSQLVC ENGYMKQQLT TVVNDPSCES VVTTPQHSLR DANSPAGLLS IAEETLAEFL SKATGTAVDW VQMPGMKPGP DSVGIFAISQ
201: RCNGVAARAC GLVSLEPMKI AEILKDRPSW FRDCRSLEVF TMFPAGNGGT IELVYMQTYA PTTLAPARDF WTLRYTTSLD NGSFVVCERS LSGSGAGPNA
301: ASASQFVRAE MLSSGYLIRP CDGGGSIIHI VDHLNLEAWS VPDVLRPLYE SSKVVAQKMT ISALRYIRQL AQESNGEVVY GLGRQPAVLR TFSQRLSRGF
401: NDAVNGFGDD GWSTMHCDGA EDIIVAINST KHLNNISNSL SFLGGVLCAK ASMLLQNVPP AVLIRFLREH RSEWADFNVD AYSAATLKAG SFAYPGMRPT
501: RFTGSQIIMP LGHTIEHEEM LEVVRLEGHS LAQEDAFMSR DVHLLQICTG IDENAVGACS ELIFAPINEM FPDDAPLVPS GFRVIPVDAK TGDVQDLLTA
601: NHRTLDLTSS LEVGPSPENA SGNSFSSSSS RCILTIAFQF PFENNLQENV AGMACQYVRS VISSVQRVAM AISPSGISPS LGSKLSPGSP EAVTLAQWIS
701: QSYSHHLGSE LLTIDSLGSD DSVLKLLWDH QDAILCCSLK PQPVFMFANQ AGLDMLETTL VALQDITLEK IFDESGRKAI CSDFAKLMQQ GFACLPSGIC
801: VSTMGRHVSY EQAVAWKVFA ASEENNNNLH CLAFSFVNWS FV
101: NKLLMEENDR LQKQVSQLVC ENGYMKQQLT TVVNDPSCES VVTTPQHSLR DANSPAGLLS IAEETLAEFL SKATGTAVDW VQMPGMKPGP DSVGIFAISQ
201: RCNGVAARAC GLVSLEPMKI AEILKDRPSW FRDCRSLEVF TMFPAGNGGT IELVYMQTYA PTTLAPARDF WTLRYTTSLD NGSFVVCERS LSGSGAGPNA
301: ASASQFVRAE MLSSGYLIRP CDGGGSIIHI VDHLNLEAWS VPDVLRPLYE SSKVVAQKMT ISALRYIRQL AQESNGEVVY GLGRQPAVLR TFSQRLSRGF
401: NDAVNGFGDD GWSTMHCDGA EDIIVAINST KHLNNISNSL SFLGGVLCAK ASMLLQNVPP AVLIRFLREH RSEWADFNVD AYSAATLKAG SFAYPGMRPT
501: RFTGSQIIMP LGHTIEHEEM LEVVRLEGHS LAQEDAFMSR DVHLLQICTG IDENAVGACS ELIFAPINEM FPDDAPLVPS GFRVIPVDAK TGDVQDLLTA
601: NHRTLDLTSS LEVGPSPENA SGNSFSSSSS RCILTIAFQF PFENNLQENV AGMACQYVRS VISSVQRVAM AISPSGISPS LGSKLSPGSP EAVTLAQWIS
701: QSYSHHLGSE LLTIDSLGSD DSVLKLLWDH QDAILCCSLK PQPVFMFANQ AGLDMLETTL VALQDITLEK IFDESGRKAI CSDFAKLMQQ GFACLPSGIC
801: VSTMGRHVSY EQAVAWKVFA ASEENNNNLH CLAFSFVNWS FV
Arabidopsis Description
REVHomeobox-leucine zipper protein REVOLUTA [Source:UniProtKB/Swiss-Prot;Acc:Q9SE43]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.