CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G157500.1	Wheat	nucleus	87.71	87.5
HORVU1Hr1G041790.2	Barley	nucleus	87.71	87.5
TraesCS1B01G173900.1	Wheat	nucleus	87.59	87.38
TraesCS1D01G155200.3	Wheat	nucleus	87.23	87.23
Os10t0480200-01	Rice	nucleus	86.87	86.67
Zm00001d032681_P004	Maize	cytosol, nucleus, plastid	90.1	86.58
OQU93425	Sorghum	nucleus	84.13	83.73
GSMUA_Achr5P18530_001	Banana	cytosol, nucleus, plastid	75.78	76.14
KRH29910	Soybean	cytosol, nucleus, plastid	71.6	71.26
VIT_06s0004g02800.t01	Wine grape	nucleus	71.0	70.5
KRH25015	Soybean	cytosol, nucleus, plastid	70.53	70.27
CDY52706	Canola	cytosol, nucleus, plastid	69.21	68.48
Bra002458.1-P	Field mustard	cytosol, nucleus, plastid	69.09	68.12
CDY31519	Canola	cytosol, nucleus, plastid	69.09	68.12
Solyc11g069470.1.1	Tomato	cytosol, nucleus, plastid	68.26	68.01
AT5G60690.1	Thale cress	cytosol, nucleus, plastid	68.14	67.81
PGSC0003DMT400020801	Potato	cytosol, nucleus, plastid	67.9	67.66
Bra020236.1-P	Field mustard	nucleus	67.18	66.55
CDX99164	Canola	cytosol, nucleus, plastid	66.47	66.39
EER91178	Sorghum	nucleus	67.54	66.28
Bra038295.1-P	Field mustard	cytosol, nucleus, plastid	65.87	66.27
CDY09191	Canola	cytosol	58.59	65.91
VIT_13s0019g04320.t01	Wine grape	nucleus	63.6	63.38
CDY31032	Canola	cytosol	57.4	62.79
EES17386	Sorghum	mitochondrion	63.72	62.31
CDY31031	Canola	extracellular	7.76	60.75
CDY27014	Canola	cytosol, plasma membrane	5.25	58.67
EES00115	Sorghum	cytosol, nucleus, plastid	58.35	57.94
CDY57624	Canola	extracellular	6.32	56.99
CDX82038	Canola	extracellular	8.11	41.98

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.2	Gene3D:3.30.530.20	UniProt:C5WYD4	ncoils:Coil	EnsemblPlants:EER94065
ProteinID:EER94065	ProteinID:EER94065.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008289	InterPro:Homeobox-like_sf
InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR002913	InterPro:IPR023393	ProteinID:KXG38315.1	InterPro:MEKHLA
ProteinID:OQU91621.1	PFAM:PF00046	PFAM:PF01852	PFAM:PF08670	PFscan:PS50071	PFscan:PS50848
PANTHER:PTHR24326	PANTHER:PTHR24326:SF326	SMART:SM00234	SMART:SM00389	EnsemblPlantsGene:SORBI_3001G217200	SUPFAM:SSF46689
SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	unigene:Sbi.21107	UniParc:UPI0001A828C4	RefSeq:XP_002467067.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:20162363..20171185

Molecular Weight (calculated)

91990.2 Da

IEP (calculated)

5.918

GRAVY (calculated)

-0.147

Length

838 amino acids

Sequence
(BLAST)

001: MAAAVAMRSG SSDGGGGYEK GGMDTGKYVR YTPEQVETLE RVYAECPKPS SARRQQLLRE CPILSNIEPK QIKVWFQNRR CRDKQRKESS RLQAVNRKLT
101: AMNKLLMEEN ERLQKQVSQL VHENAYMKQQ LQNPSLANDA SCDSNVTAPA NLRDASNPSG LLSIAEETLT EFLSKATGTA IDWVQMPGMK PGPDSFGIVT
201: ISHGGRGVAA RACGLVNLEP TKIVEILKDR PSWFRDCRSL EVFTMLPAGN GGTIELVYMQ MYAPTTLVPA RDFWTLRYTT TMEDGSLVVC ERSLSGSGDG
301: QSAATAQQFV RAEMLPSGYL VRQCEGGGSI VRIVDHLDLD AWSVPEVLRP LYESSRVVAQ KMTTAALRHL RQIAQETSGE VVYAMGRQPA VLRTFSQRLS
401: RGFNDAISGF NDDGWSIMAG DGIEDVIIAC NSKKIRSGSN PATAFGAPGG IICAKASMLL QSVPPAVLVR FLREHRSEWA DYNFDAYSAS ALKTSPCSLP
501: GLRPMRFSGS QIIMPLAHTV ENEEILEVVR LEGQTLTHDE GLLSRDIHLL QLCTGIDEKS MGSCFQLVFA PIDELFPDDA PLISSGFRVI PLDIKTDGLS
601: SGRTLDLASS LEVGATTQQA SADGSQDACN LRSVLTIAFQ FPYEIHLQDT VAAMARQYVR SIVSAVQRVS MAISPSQSGL NTGQKIISGF PEAATLVRWI
701: CQSYRYHMGV DLVSHSDQAG ESLLRMFWDH QDAVLCCSFK EKPVFTFGNQ MGIDMLETTL IALQDLTLDK IFDEPGRKAL HAEVPKLMEQ GYAYLPAGVC
801: LSGMGRHVSY EEAVAWKVLG EDGNVHCLAF CFVNWSFV

Best Arabidopsis Sequence Match ( AT5G60690.1 )
(BLAST)

001: MEMAVANHRE RSSDSMNRHL DSSGKYVRYT AEQVEALERV YAECPKPSSL RRQQLIRECS ILANIEPKQI KVWFQNRRCR DKQRKEASRL QSVNRKLSAM
101: NKLLMEENDR LQKQVSQLVC ENGYMKQQLT TVVNDPSCES VVTTPQHSLR DANSPAGLLS IAEETLAEFL SKATGTAVDW VQMPGMKPGP DSVGIFAISQ
201: RCNGVAARAC GLVSLEPMKI AEILKDRPSW FRDCRSLEVF TMFPAGNGGT IELVYMQTYA PTTLAPARDF WTLRYTTSLD NGSFVVCERS LSGSGAGPNA
301: ASASQFVRAE MLSSGYLIRP CDGGGSIIHI VDHLNLEAWS VPDVLRPLYE SSKVVAQKMT ISALRYIRQL AQESNGEVVY GLGRQPAVLR TFSQRLSRGF
401: NDAVNGFGDD GWSTMHCDGA EDIIVAINST KHLNNISNSL SFLGGVLCAK ASMLLQNVPP AVLIRFLREH RSEWADFNVD AYSAATLKAG SFAYPGMRPT
501: RFTGSQIIMP LGHTIEHEEM LEVVRLEGHS LAQEDAFMSR DVHLLQICTG IDENAVGACS ELIFAPINEM FPDDAPLVPS GFRVIPVDAK TGDVQDLLTA
601: NHRTLDLTSS LEVGPSPENA SGNSFSSSSS RCILTIAFQF PFENNLQENV AGMACQYVRS VISSVQRVAM AISPSGISPS LGSKLSPGSP EAVTLAQWIS
701: QSYSHHLGSE LLTIDSLGSD DSVLKLLWDH QDAILCCSLK PQPVFMFANQ AGLDMLETTL VALQDITLEK IFDESGRKAI CSDFAKLMQQ GFACLPSGIC
801: VSTMGRHVSY EQAVAWKVFA ASEENNNNLH CLAFSFVNWS FV

Arabidopsis Description

REVHomeobox-leucine zipper protein REVOLUTA [Source:UniProtKB/Swiss-Prot;Acc:Q9SE43]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.