CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05354

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G30490.1	EES05354	AT1G12980.1	17376809
AT1G30490.1	EES05354	AT1G12980.1	18830673

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041489_P009	Maize	cytosol, nucleus, plastid	91.83	90.98
Zm00001d031061_P007	Maize	mitochondrion	88.45	84.79
EER91178	Sorghum	nucleus	82.03	82.32
GSMUA_Achr2P13050_001	Banana	cytosol	68.73	75.42
VIT_10s0003g04670.t01	Wine grape	cytosol, nucleus, plastid	72.7	73.73
GSMUA_Achr4P31660_001	Banana	cytosol	73.75	73.57
GSMUA_Achr5P02420_001	Banana	cytosol	75.03	73.57
GSMUA_Achr7P01060_001	Banana	cytosol	73.51	73.34
KRH11775	Soybean	cytosol, nucleus, plastid	71.53	72.46
KRH36781	Soybean	cytosol, nucleus, plastid	70.95	71.36
GSMUA_Achr8P02960_001	Banana	cytosol	69.54	71.04
GSMUA_Achr4P28360_001	Banana	cytosol	74.33	70.78
PGSC0003DMT400030829	Potato	cytosol, nucleus, plastid	70.25	70.66
CDY43661	Canola	cytosol	66.39	69.99
Solyc02g024070.2.1	Tomato	cytosol, nucleus, plastid	69.43	69.92
KRH43001	Soybean	cytosol	68.96	69.61
CDY31635	Canola	nucleus	68.84	69.49
KRH59117	Soybean	cytosol	69.08	69.4
AT1G30490.1	Thale cress	nucleus	68.03	69.32
Bra021926.1-P	Field mustard	cytosol	68.14	69.28
AT2G34710.1	Thale cress	cytosol	68.84	69.25
Bra005398.1-P	Field mustard	cytosol	68.49	69.14
CDX84286	Canola	cytosol	68.26	68.9
Bra032394.1-P	Field mustard	cytosol, nucleus, plastid	67.44	68.81
CDY02297	Canola	nucleus	67.44	68.81
CDY09572	Canola	cytosol, nucleus, plastid	67.33	68.69
PGSC0003DMT400054421	Potato	cytosol, nucleus, plastid	66.86	68.62
Solyc02g069830.2.1	Tomato	nucleus	67.33	68.53
Zm00001d018824_P001	Maize	cytosol	10.27	64.23
EER94065	Sorghum	nucleus	62.31	63.72
OQU93425	Sorghum	nucleus	61.84	62.95
EES00115	Sorghum	cytosol, nucleus, plastid	57.99	58.89
GSMUA_Achr2P13060_001	Banana	cytosol	5.72	58.33
AT5G32670.1	Thale cress	cytosol, plastid	9.22	41.15
CDX71242	Canola	peroxisome	3.73	38.1
Solyc01g057960.1.1	Tomato	plastid	5.95	36.96
CDY53980	Canola	cytosol, nucleus, peroxisome	6.18	34.19

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.3.2	Gene3D:3.30.530.20	EntrezGene:8084396	UniProt:C5YRY3	ncoils:Coil
EnsemblPlants:EES17386	ProteinID:EES17386	ProteinID:EES17386.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008289
InterPro:Homeobox-like_sf	InterPro:Homeobox_dom	InterPro:IPR001356	InterPro:IPR002913	InterPro:IPR023393	InterPro:MEKHLA
PFAM:PF00046	PFAM:PF01852	PFAM:PF08670	PFscan:PS50071	PFscan:PS50848	PANTHER:PTHR24326
PANTHER:PTHR24326:SF494	SMART:SM00234	SMART:SM00389	EnsemblPlantsGene:SORBI_3008G168100	SUPFAM:SSF46689	SUPFAM:SSF55961
InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	unigene:Sbi.8069	UniParc:UPI0001A8823A	RefSeq:XP_002443548.1	SEG:seg

Description

hypothetical protein

Coordinates

chr8:-:60200470..60207218

Molecular Weight (calculated)

93138.5 Da

IEP (calculated)

6.839

GRAVY (calculated)

-0.148

Length

857 amino acids

Sequence
(BLAST)

001: MAMVASRERR LSPPGGAAQG APQVDAGKYV RYTPEQVEAL ERVYSECPKP SSLRRQQLIR DCPILSNIEP KQIKVWFQNR RCREKQRKES SRLQTVNRKL
101: SAMNKLLMEE NDRLQKQVSR LVFDNGYMKN RLHSPSVATT DTSCESVVTS GHHNQQQNPA VLHPPQRDAN NPAGLLAIAE ETLAEFMSKA TGTAVNWVQM
201: VGMKPGPDSV GIIAVSHNCS GVAARACGLV SLEPTKVAEI LKDRASWYRD CRHVDILHVI PTGNGGTIEL IYMQTYALTT LAEPRDFWTL RYTSGLDDGS
301: LVICERSLTQ STGGPSGPNT PNFIRAEVLP SGYLIRPCDG GGSMIYIVDH VDLNASSVPE VLRPLYESPK ILAQKMTAAA LRHIRQIAHE SSGEMPYGVG
401: RQPAVLRTFS QRLSRGFNDA VSGFPDDGWS SLLSSDGAED ITISINSSPN KLIGSHVSPS PFFSAMGGGI MCAKASMLLQ NVPPAILVRF LREHRSEWAD
501: PGVDAYSAAS LRANPYAVPG LRAGGFMGNQ VILPLARTLE HEECLEVIRL EGHGFSHEEV LMSRDMFLLQ LCSGVDENAP GACAQLVFAP IDESFADDAP
601: LLPSGFRVIP LDAKTDVPSA TRTLDLASAL EVGSGGGLRA LSDSSGTCTT RSVLTIAFQF SFENHLRDSV AAMARQYVRG VMASVQRVAM AIAPSRLGPH
701: IELKHPPGSP EALALATWIG RSYRAHTGTE IRWSDTEGAD SPLMPFWKHS DAILCCSLKP AFTLKFANSA GFDILETTLV NIQDLPLEAV LDDDGQKALF
801: AQLSKIMQQG LAYLPGGVCR SSMGRQASYE QAVAWKVVGD DGAPQCLALM LVNWTFI

Best Arabidopsis Sequence Match ( AT2G34710.1 )
(BLAST)

001: MMMVHSMSRD MMNRESPDKG LDSGKYVRYT PEQVEALERV YTECPKPSSL RRQQLIRECP ILSNIEPKQI KVWFQNRRCR EKQRKEAARL QTVNRKLNAM
101: NKLLMEENDR LQKQVSNLVY ENGHMKHQLH TASGTTTDNS CESVVVSGQQ HQQQNPNPQH QQRDANNPAG LLSIAEEALA EFLSKATGTA VDWVQMIGMK
201: PGPDSIGIVA ISRNCSGIAA RACGLVSLEP MKVAEILKDR PSWLRDCRSV DTLSVIPAGN GGTIELIYTQ MYAPTTLAAA RDFWTLRYST CLEDGSYVVC
301: ERSLTSATGG PTGPPSSNFV RAEMKPSGFL IRPCDGGGSI LHIVDHVDLD AWSVPEVMRP LYESSKILAQ KMTVAALRHV RQIAQETSGE VQYGGGRQPA
401: VLRTFSQRLC RGFNDAVNGF VDDGWSPMGS DGAEDVTVMI NLSPGKFGGS QYGNSFLPSF GSGVLCAKAS MLLQNVPPAV LVRFLREHRS EWADYGVDAY
501: AAASLRASPF AVPCARAGGF PSNQVILPLA QTVEHEESLE VVRLEGHAYS PEDMGLARDM YLLQLCSGVD ENVVGGCAQL VFAPIDESFA DDAPLLPSGF
601: RIIPLEQKST PNGASANRTL DLASALEGST RQAGEADPNG CNFRSVLTIA FQFTFDNHSR DSVASMARQY VRSIVGSIQR VALAIAPRPG SNISPISVPT
701: SPEALTLVRW ISRSYSLHTG ADLFGSDSQT SGDTLLHQLW NHSDAILCCS LKTNASPVFT FANQTGLDML ETTLVALQDI MLDKTLDEPG RKALCSEFPK
801: IMQQGYAHLP AGVCASSMGR MVSYEQATVW KVLEDDESNH CLAFMFVNWS FV

Arabidopsis Description

ATHB-14Homeobox-leucine zipper protein ATHB-14 [Source:UniProtKB/Swiss-Prot;Acc:O04291]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.