CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31031	Canola	extracellular	30.97	44.86
CDX71242	Canola	peroxisome	20.65	38.1
CDY57624	Canola	extracellular	22.58	37.63
CDY27014	Canola	cytosol, plasma membrane	16.77	34.67
GSMUA_Achr2P13060_001	Banana	cytosol	18.71	34.52
CDX82038	Canola	extracellular	25.81	24.69
CDX68901	Canola	plastid	25.81	19.8
CDY09191	Canola	cytosol	43.87	9.13
CDY52706	Canola	cytosol, nucleus, plastid	48.39	8.85
CDY31519	Canola	cytosol, nucleus, plastid	48.39	8.82
CDX99164	Canola	cytosol, nucleus, plastid	47.74	8.82
CDY02297	Canola	nucleus	41.94	7.74
CDY09572	Canola	cytosol, nucleus, plastid	41.94	7.74
VIT_10s0003g04670.t01	Wine grape	cytosol, nucleus, plastid	41.94	7.69
KRH11775	Soybean	cytosol, nucleus, plastid	41.94	7.68
PGSC0003DMT400030829	Potato	cytosol, nucleus, plastid	41.94	7.63
CDY43661	Canola	cytosol	40.0	7.63
TraesCS5A01G375800.1	Wheat	cytosol, nucleus, plastid	41.94	7.54
TraesCS5B01G378000.1	Wheat	cytosol, nucleus, plastid	41.94	7.54
TraesCS5D01G385300.1	Wheat	cytosol, nucleus, plastid	41.94	7.54
CDY31635	Canola	nucleus	41.29	7.54
CDX84286	Canola	cytosol	41.29	7.54
KRH36781	Soybean	cytosol, nucleus, plastid	41.29	7.51
Zm00001d013699_P001	Maize	cytosol	41.29	7.48
Os03t0640800-01	Rice	plastid	41.29	7.45
CDY02553	Canola	cytosol	40.0	7.43
Solyc02g024070.2.1	Tomato	cytosol, nucleus, plastid	40.65	7.4
EER91178	Sorghum	nucleus	40.65	7.38
Zm00001d033246_P004	Maize	cytosol	40.65	7.36
GSMUA_Achr5P02420_001	Banana	cytosol	41.29	7.32
PGSC0003DMT400054421	Potato	cytosol, nucleus, plastid	39.35	7.31
KRH43001	Soybean	cytosol	40.0	7.3
CDY60592	Canola	cytosol	39.35	7.28
CDY47819	Canola	cytosol	39.35	7.28
Solyc02g069830.2.1	Tomato	nucleus	39.35	7.24
KRH59117	Soybean	cytosol	39.35	7.15
TraesCS5A01G043400.1	Wheat	cytosol, nucleus, plastid	38.71	7.09
Os12t0612700-01	Rice	nucleus	38.71	7.02
HORVU5Hr1G010650.1	Barley	cytosol	38.71	6.99
GSMUA_Achr4P31660_001	Banana	cytosol	38.71	6.98
GSMUA_Achr8P02960_001	Banana	cytosol	37.42	6.91
GSMUA_Achr4P28360_001	Banana	cytosol	40.0	6.89
GSMUA_Achr7P01060_001	Banana	cytosol	38.06	6.87
TraesCS5B01G047200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	38.71	6.83
TraesCS5D01G052300.1	Wheat	mitochondrion, plastid	38.71	6.8
HORVU5Hr1G093150.2	Barley	cytosol, plastid	41.94	6.48
EES17386	Sorghum	mitochondrion	34.19	6.18
Zm00001d041489_P009	Maize	cytosol, nucleus, plastid	32.9	5.9
Zm00001d031061_P007	Maize	mitochondrion	32.26	5.59
HORVU0Hr1G010250.3	Barley	cytosol	20.0	4.16
CDY31032	Canola	cytosol	19.35	3.92
CDY69514	Canola	nucleus	15.48	3.81
GSMUA_Achr2P13050_001	Banana	cytosol	17.42	3.46
CDY45021	Canola	nucleus	16.13	3.39
CDY28273	Canola	nucleus	16.13	3.39
CDY51188	Canola	nucleus	14.19	3.05
Zm00001d018824_P001	Maize	cytosol	1.29	1.46

Protein Annotations

EnsemblPlants:CDY53980	EnsemblPlantsGene:GSBRNA2T00011848001	Gene3D:3.30.70.330	GO:A0A078ISD3	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR012677	InterPro:MEKHLA	InterPro:Nucleotide-bd_a/b_plait_sf	InterPro:RBD_domain_sf	PANTHER:PTHR44799
PFAM:PF08670	ProteinID:CDY53980	ProteinID:CDY53980.1	SEG:seg	SUPFAM:SSF54928	UniParc:UPI0004EF2077
UniProt:A0A078ISD3	MapMan:35.1	:	:	:	:

Description

BnaC09g53470DBnaC09g53470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ISD3]

Coordinates

chrLK033259:+:42591..44071

Molecular Weight (calculated)

17733.3 Da

IEP (calculated)

4.973

GRAVY (calculated)

-0.104

Length

155 amino acids

Sequence
(BLAST)

001: MRFHRDCKRR SNLRNDSQDR KTFDVGTNLF IGNLGSDVDE KIVYDTFSTF GELVALLLIL NHNLGSELVN DCLSWKQDSV ETYMESPRCH LVLLFKVFMF
101: ANQAGLDMLE TTLVALQDIA LEKIFDESGR KALCSDFAKL MQQESVCLQW GTCHL

Best Arabidopsis Sequence Match ( AT5G60690.1 )
(BLAST)

001: MEMAVANHRE RSSDSMNRHL DSSGKYVRYT AEQVEALERV YAECPKPSSL RRQQLIRECS ILANIEPKQI KVWFQNRRCR DKQRKEASRL QSVNRKLSAM
101: NKLLMEENDR LQKQVSQLVC ENGYMKQQLT TVVNDPSCES VVTTPQHSLR DANSPAGLLS IAEETLAEFL SKATGTAVDW VQMPGMKPGP DSVGIFAISQ
201: RCNGVAARAC GLVSLEPMKI AEILKDRPSW FRDCRSLEVF TMFPAGNGGT IELVYMQTYA PTTLAPARDF WTLRYTTSLD NGSFVVCERS LSGSGAGPNA
301: ASASQFVRAE MLSSGYLIRP CDGGGSIIHI VDHLNLEAWS VPDVLRPLYE SSKVVAQKMT ISALRYIRQL AQESNGEVVY GLGRQPAVLR TFSQRLSRGF
401: NDAVNGFGDD GWSTMHCDGA EDIIVAINST KHLNNISNSL SFLGGVLCAK ASMLLQNVPP AVLIRFLREH RSEWADFNVD AYSAATLKAG SFAYPGMRPT
501: RFTGSQIIMP LGHTIEHEEM LEVVRLEGHS LAQEDAFMSR DVHLLQICTG IDENAVGACS ELIFAPINEM FPDDAPLVPS GFRVIPVDAK TGDVQDLLTA
601: NHRTLDLTSS LEVGPSPENA SGNSFSSSSS RCILTIAFQF PFENNLQENV AGMACQYVRS VISSVQRVAM AISPSGISPS LGSKLSPGSP EAVTLAQWIS
701: QSYSHHLGSE LLTIDSLGSD DSVLKLLWDH QDAILCCSLK PQPVFMFANQ AGLDMLETTL VALQDITLEK IFDESGRKAI CSDFAKLMQQ GFACLPSGIC
801: VSTMGRHVSY EQAVAWKVFA ASEENNNNLH CLAFSFVNWS FV

Arabidopsis Description

REVHomeobox-leucine zipper protein REVOLUTA [Source:UniProtKB/Swiss-Prot;Acc:Q9SE43]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.