Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G090030.9 | Barley | nucleus | 97.38 | 97.49 |
| TraesCS4D01G359600.1 | Wheat | nucleus | 96.78 | 96.9 |
| TraesCS5A01G549700.1 | Wheat | nucleus | 95.35 | 95.47 |
| HORVU5Hr1G061410.29 | Barley | cytosol | 31.23 | 90.66 |
| Os03t0109400-02 | Rice | nucleus | 87.96 | 87.96 |
| OQU93425 | Sorghum | nucleus | 86.53 | 86.22 |
| Zm00001d027317_P015 | Maize | nucleus | 86.41 | 84.99 |
| Zm00001d048527_P028 | Maize | nucleus | 85.46 | 84.75 |
| TraesCS1B01G173900.1 | Wheat | nucleus | 82.12 | 82.02 |
| GSMUA_Achr5P18530_001 | Banana | cytosol, nucleus, plastid | 72.35 | 72.78 |
| KRH29910 | Soybean | cytosol, nucleus, plastid | 70.2 | 69.95 |
| KRH25015 | Soybean | cytosol, nucleus, plastid | 69.49 | 69.32 |
| VIT_06s0004g02800.t01 | Wine grape | nucleus | 69.61 | 69.19 |
| AT5G60690.1 | Thale cress | cytosol, nucleus, plastid | 67.1 | 66.86 |
| Bra002458.1-P | Field mustard | cytosol, nucleus, plastid | 67.46 | 66.59 |
| CDY31519 | Canola | cytosol, nucleus, plastid | 67.46 | 66.59 |
| CDY52706 | Canola | cytosol, nucleus, plastid | 67.22 | 66.59 |
| Solyc11g069470.1.1 | Tomato | cytosol, nucleus, plastid | 66.75 | 66.59 |
| PGSC0003DMT400020801 | Potato | cytosol, nucleus, plastid | 66.51 | 66.35 |
| CDX99164 | Canola | cytosol, nucleus, plastid | 64.96 | 64.96 |
| Bra038295.1-P | Field mustard | cytosol, nucleus, plastid | 64.48 | 64.95 |
| CDY09191 | Canola | cytosol | 57.45 | 64.7 |
| Bra020236.1-P | Field mustard | nucleus | 65.2 | 64.66 |
| TraesCS5B01G378000.1 | Wheat | cytosol, nucleus, plastid | 64.6 | 62.88 |
| VIT_13s0019g04320.t01 | Wine grape | nucleus | 61.98 | 61.83 |
| Zm00001d049529_P001 | Maize | cytosol, plastid | 13.95 | 61.58 |
| CDY31032 | Canola | cytosol | 56.14 | 61.49 |
| TraesCS5B01G047200.1 | Wheat | extracellular, mitochondrion, nucleus, plastid | 63.17 | 60.3 |
| CDY31031 | Canola | extracellular | 7.51 | 58.88 |
| CDY27014 | Canola | cytosol, plasma membrane | 5.01 | 56.0 |
| CDY57624 | Canola | extracellular | 6.08 | 54.84 |
| TraesCS3B01G159100.2 | Wheat | cytosol, nucleus, plastid | 56.26 | 53.88 |
| CDX82038 | Canola | extracellular | 8.1 | 41.98 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.2 | Gene3D:3.30.530.20 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0008289 | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 |
| InterPro:IPR002913 | InterPro:IPR023393 | InterPro:MEKHLA | PFAM:PF00046 | PFAM:PF01852 | PFAM:PF08670 |
| PFscan:PS50071 | PFscan:PS50848 | PANTHER:PTHR24326 | PANTHER:PTHR24326:SF326 | SMART:SM00234 | SMART:SM00389 |
| SUPFAM:SSF46689 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | EnsemblPlantsGene:TraesCS4B01G385200 | EnsemblPlants:TraesCS4B01G385200.1 |
| TIGR:cd00086 | TIGR:cd08875 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4B:-:664152394..664159763
Molecular Weight (calculated)
91514.5 Da
IEP (calculated)
5.570
GRAVY (calculated)
-0.067
Length
839 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAMAMRGG SSDGGGGSDR GAGMDSGKYV RYTPEQVDTL ERVYADCPKP TSSRRQQLLR ECPILANIEA RQIKVWFQNR RCRDKLRKES SRLESVNRKV
101: SAMNKLLMEE NERLQKQVSQ LVHENAQVRQ QLQNTSVAND ASCESNVTTP QNPIRDASNP SGLLSIAEET LTEFLSKATG TAIEWVQMPG MKPGPDSVGI
201: VAISHGCRGV AARACGLVNL EPTKVVEILK DRPSWFRDCR SLEVFTVLPG ANGGTIELVY TQLYAPTTLV PARDFWTLRY TTIVEDGSLV VCERSLSGSG
301: GGPSAASAQQ FVRAEMLPSG YLVRPCDGGG SIVHIVDHLE FEAWNIPEVL RPLYESSRVV AQKMTTAALR HIRQIAQETS GEVVYALGRQ PAVLRTFSQR
401: LSRGFNDAIS GFNDDGWSIM AGDGIEDVVV ACNSTKKIRN VSNGVNAFEA PGGTICAKAS MLLQSVPPAI LVRFLREHRS EWADYSMDAY LASALKTSTC
501: PFPGLRPMRF SGSQIIMPLA HTVENEEILE VVRLEGQPLS HDEVLLSRDI DMLQLCTGID EKSVGSSFQL VFAPIDDFPD DAPLISSGFR VIPLDMKTDV
601: VSSGRTLDLA SSLEVGSTAA QASGASPDDC NVRSVLTIAF QFPYELHLQD SVAAMARQYV RSIVSAVQRV SIAISPSQSG INAGQRILSG LPEAATLARW
701: ICQSYHYHLG VELLAQSDVA GEALLKMLWH YQDAILCCSF KEVPVFTFAN KAGLDMLETS LVALQDLTLD KIFDEPGRKA LFTEISKLVE EGHVYLPSGV
801: CMSGMGRHVS FDQAVAWKVL GEDSGVHCLA LCFVNWSFV
101: SAMNKLLMEE NERLQKQVSQ LVHENAQVRQ QLQNTSVAND ASCESNVTTP QNPIRDASNP SGLLSIAEET LTEFLSKATG TAIEWVQMPG MKPGPDSVGI
201: VAISHGCRGV AARACGLVNL EPTKVVEILK DRPSWFRDCR SLEVFTVLPG ANGGTIELVY TQLYAPTTLV PARDFWTLRY TTIVEDGSLV VCERSLSGSG
301: GGPSAASAQQ FVRAEMLPSG YLVRPCDGGG SIVHIVDHLE FEAWNIPEVL RPLYESSRVV AQKMTTAALR HIRQIAQETS GEVVYALGRQ PAVLRTFSQR
401: LSRGFNDAIS GFNDDGWSIM AGDGIEDVVV ACNSTKKIRN VSNGVNAFEA PGGTICAKAS MLLQSVPPAI LVRFLREHRS EWADYSMDAY LASALKTSTC
501: PFPGLRPMRF SGSQIIMPLA HTVENEEILE VVRLEGQPLS HDEVLLSRDI DMLQLCTGID EKSVGSSFQL VFAPIDDFPD DAPLISSGFR VIPLDMKTDV
601: VSSGRTLDLA SSLEVGSTAA QASGASPDDC NVRSVLTIAF QFPYELHLQD SVAAMARQYV RSIVSAVQRV SIAISPSQSG INAGQRILSG LPEAATLARW
701: ICQSYHYHLG VELLAQSDVA GEALLKMLWH YQDAILCCSF KEVPVFTFAN KAGLDMLETS LVALQDLTLD KIFDEPGRKA LFTEISKLVE EGHVYLPSGV
801: CMSGMGRHVS FDQAVAWKVL GEDSGVHCLA LCFVNWSFV
001: MAMSCKDGKL GCLDNGKYVR YTPEQVEALE RLYHDCPKPS SIRRQQLIRE CPILSNIEPK QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN
101: DRLQKQVSQL VHENSYFRQH TPNPSLPAKD TSCESVVTSG QHQLASQNPQ RDASPAGLLS IAEETLAEFL SKATGTAVEW VQMPGMKPGP DSIGIIAISH
201: GCTGVAARAC GLVGLEPTRV AEIVKDRPSW FRECRAVEVM NVLPTANGGT VELLYMQLYA PTTLAPPRDF WLLRYTSVLE DGSLVVCERS LKSTQNGPSM
301: PLVQNFVRAE MLSSGYLIRP CDGGGSIIHI VDHMDLEACS VPEVLRPLYE SPKVLAQKTT MAALRQLKQI AQEVTQTNSS VNGWGRRPAA LRALSQRLSR
401: GFNEAVNGFT DEGWSVIGDS MDDVTITVNS SPDKLMGLNL TFANGFAPVS NVVLCAKASM LLQNVPPAIL LRFLREHRSE WADNNIDAYL AAAVKVGPCS
501: ARVGGFGGQV ILPLAHTIEH EEFMEVIKLE GLGHSPEDAI VPRDIFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL DSAKEVSSPN
601: RTLDLASALE IGSAGTKAST DQSGNSTCAR SVMTIAFEFG IESHMQEHVA SMARQYVRGI ISSVQRVALA LSPSHISSQV GLRTPLGTPE AQTLARWICQ
701: SYRGYMGVEL LKSNSDGNES ILKNLWHHTD AIICCSMKAL PVFTFANQAG LDMLETTLVA LQDISLEKIF DDNGRKTLCS EFPQIMQQGF ACLQGGICLS
801: SMGRPVSYER AVAWKVLNEE ENAHCICFVF INWSFV
101: DRLQKQVSQL VHENSYFRQH TPNPSLPAKD TSCESVVTSG QHQLASQNPQ RDASPAGLLS IAEETLAEFL SKATGTAVEW VQMPGMKPGP DSIGIIAISH
201: GCTGVAARAC GLVGLEPTRV AEIVKDRPSW FRECRAVEVM NVLPTANGGT VELLYMQLYA PTTLAPPRDF WLLRYTSVLE DGSLVVCERS LKSTQNGPSM
301: PLVQNFVRAE MLSSGYLIRP CDGGGSIIHI VDHMDLEACS VPEVLRPLYE SPKVLAQKTT MAALRQLKQI AQEVTQTNSS VNGWGRRPAA LRALSQRLSR
401: GFNEAVNGFT DEGWSVIGDS MDDVTITVNS SPDKLMGLNL TFANGFAPVS NVVLCAKASM LLQNVPPAIL LRFLREHRSE WADNNIDAYL AAAVKVGPCS
501: ARVGGFGGQV ILPLAHTIEH EEFMEVIKLE GLGHSPEDAI VPRDIFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL DSAKEVSSPN
601: RTLDLASALE IGSAGTKAST DQSGNSTCAR SVMTIAFEFG IESHMQEHVA SMARQYVRGI ISSVQRVALA LSPSHISSQV GLRTPLGTPE AQTLARWICQ
701: SYRGYMGVEL LKSNSDGNES ILKNLWHHTD AIICCSMKAL PVFTFANQAG LDMLETTLVA LQDISLEKIF DDNGRKTLCS EFPQIMQQGF ACLQGGICLS
801: SMGRPVSYER AVAWKVLNEE ENAHCICFVF INWSFV
Arabidopsis Description
ATHB-15Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Source:UniProtKB/TrEMBL;Acc:B3H4G8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.