Factsheet for Bra030696.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15624	Canola	nucleus	99.7	99.7
Bra031588.1-P	Field mustard	nucleus	74.55	78.55
AT1G07640.3	Thale cress	nucleus	76.95	75.81
Bra035667.1-P	Field mustard	nucleus	58.38	56.69
KRH24808	Soybean	nucleus	40.12	43.65
Bra009587.1-P	Field mustard	nucleus	23.05	43.5
VIT_06s0004g04520.t01	Wine grape	nucleus	40.12	41.88
KRH29808	Soybean	nucleus, plastid	38.62	38.51
KRH10276	Soybean	nucleus	33.83	37.17
PGSC0003DMT400060216	Potato	nucleus	32.04	35.43
KRH23056	Soybean	nucleus	28.14	34.94
Bra000008.1-P	Field mustard	nucleus	30.54	34.81
Solyc05g054510.1.1	Tomato	nucleus	29.94	33.56
Bra005181.1-P	Field mustard	nucleus	31.74	32.62
Bra017171.1-P	Field mustard	nucleus	29.94	32.36
Bra005725.1-P	Field mustard	nucleus	38.62	32.01
Bra014752.1-P	Field mustard	nucleus	33.53	32.0
Bra028872.1-P	Field mustard	nucleus	37.43	30.79
Bra007156.1-P	Field mustard	nucleus	29.64	30.28
Bra032891.1-P	Field mustard	nucleus	23.35	26.26
Bra010884.1-P	Field mustard	nucleus	22.75	25.76
Bra037822.1-P	Field mustard	nucleus	21.56	25.35
Bra031853.1-P	Field mustard	nucleus	22.75	25.0
Bra012804.1-P	Field mustard	nucleus	17.96	24.9
Bra020261.1-P	Field mustard	nucleus	17.66	24.79
Bra035956.1-P	Field mustard	nucleus	19.76	24.72
Bra030089.1-P	Field mustard	nucleus	21.86	24.5
Bra002504.1-P	Field mustard	nucleus	18.86	24.42
Bra006923.1-P	Field mustard	nucleus	17.07	23.55
Bra024399.1-P	Field mustard	nucleus	21.56	23.53
Bra013003.1-P	Field mustard	nucleus	20.66	23.47
Bra029352.1-P	Field mustard	nucleus	19.16	23.02
Bra006675.1-P	Field mustard	nucleus	18.26	22.02
Bra013758.1-P	Field mustard	nucleus	21.86	21.73
Bra035696.1-P	Field mustard	nucleus	16.47	21.48
Bra037401.1-P	Field mustard	nucleus	19.16	21.48
Bra010548.1-P	Field mustard	nucleus	21.86	20.74
Bra014418.1-P	Field mustard	nucleus	19.16	20.65
Bra004525.1-P	Field mustard	nucleus	21.56	20.45
Bra017906.1-P	Field mustard	nucleus	15.27	20.16
Bra019247.1-P	Field mustard	nucleus	20.66	20.12
Bra035873.1-P	Field mustard	nucleus	20.36	20.0
Bra012277.1-P	Field mustard	nucleus	15.57	19.92
Bra000429.1-P	Field mustard	nucleus	21.56	19.51
Bra027722.1-P	Field mustard	nucleus	18.56	19.14
Bra009588.1-P	Field mustard	plastid	10.18	19.1
Bra039272.1-P	Field mustard	nucleus, plastid	20.06	18.61
Bra010136.1-P	Field mustard	nucleus	20.06	18.21

Protein Annotations

MapMan:15.5.1.5	ProteinID:ACR48176	ProteinID:ACR48176.1	EnsemblPlantsGene:Bra030696	EnsemblPlants:Bra030696.1	EnsemblPlants:Bra030696.1-P
EMBL:FJ584285	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003851	UniProt:M4EPH6	PFAM:PD007478
PFAM:PF02701	ScanProsite:PS01361	PFscan:PS50884	PANTHER:PTHR31992	PANTHER:PTHR31992:SF66	UniParc:UPI0002546D5E
InterPro:Znf_Dof	SEG:seg	:	:	:	:

Description

AT1G07640 (E=2e-115) OBP2 | OBP2; DNA binding / transcription factor

Coordinates

chrA08:+:20766948..20768223

Molecular Weight (calculated)

35884.6 Da

IEP (calculated)

9.715

GRAVY (calculated)

-0.679

Length

334 amino acids

Sequence
(BLAST)

001: MVFSSNWSQP TNSNHHQHQL HENGSLVSGH GLLSQQLPPC PPNPNPNNHY AAVASGLPAR LGGSMAERAR QAKAPPPEGA LKCPRCDSIN TKFCYYNNYN
101: LTQPRYFCKA CRRYWTRGGA LRNVPVGGGC RKNSKKGKNG NSKSSSSSSK QSSSTVNDPS SNSGQLRTNY QFPFLPTLHN LTQLEGIGLN LTAANGNNQG
201: HQIGSSLMND LGFLHVGNGR NIAAPISGNI HDNNNNGASS LMSHFNLFDP TTGLHAFQNG GNIVNNVGIS FSSTSMVDSR AYQAAPVKME EQPGLVNLSR
301: PVSGLTSPGN QTNQYLWNSS DFSGPSSNDH HQLL

Best Arabidopsis Sequence Match ( AT1G07640.3 )
(BLAST)

001: MAFPSNWSQP TNSNHQHHLQ HQLNENGSII SGHGLVLSHQ LPPLQANPNP NHHHVATSAG LPSRMGGSMA ERARQANIPP LAGPLKCPRC DSSNTKFCYY
101: NNYNLTQPRH FCKGCRRYWT QGGALRNVPV GGGCRRNNKK GKNGNLKSSS SSSKQSSSVN AQSPSSGQLR TNHQFPFSPT LYNLTQLGGI GLNLAATNGN
201: NQAHQIGSSL MMSDLGFLHG RNTSTPMTGN IHENNNNNNN ENNLMASVGS LSPFALFDPT TGLYAFQNDG NIGNNVGISG SSTSMVDSRV YQTPPVKMEE
301: QPNLANLSRP VSGLTSPGNQ TNQYFWPGSD FSGPSNDLL

Arabidopsis Description

OBP2Dof-type zinc finger DNA-binding family protein [Source:UniProtKB/TrEMBL;Acc:Q2V4Q1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.