Factsheet for GSMUA_Achr4P30130_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	83.09	82.6
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	79.23	79.23
GSMUA_Achr5P12830_001	Banana	cytosol	78.04	77.58
GSMUA_Achr1P00770_001	Banana	cytosol	76.26	76.26
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	77.15	76.25
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	78.93	75.35
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	73.29	73.29
EER92960	Sorghum	cytosol	71.22	71.43
Os03t0122300-01	Rice	cytosol	72.4	71.34
TraesCS4B01G346900.1	Wheat	cytosol	70.62	70.83
TraesCS4D01G341800.1	Wheat	cytosol	70.62	70.83
EER94585	Sorghum	cytosol	70.03	70.24
HORVU4Hr1G084810.2	Barley	cytosol, peroxisome, plastid	68.84	69.05
Zm00001d029744_P001	Maize	cytosol	68.25	68.45
VIT_13s0047g00210.t01	Wine grape	cytosol	67.36	67.36
KRH53636	Soybean	cytosol	66.47	66.27
VIT_16s0098g00860.t01	Wine grape	cytosol, peroxisome, plastid	66.17	65.98
Solyc03g080190.2.1	Tomato	cytosol, peroxisome, plastid	65.88	65.88
KRH64291	Soybean	cytosol	65.58	65.38
PGSC0003DMT400001570	Potato	cytosol	65.28	65.28
Zm00001d027423_P002	Maize	cytosol, nucleus, peroxisome	70.92	64.77
CDX88109	Canola	mitochondrion	64.09	63.34
PGSC0003DMT400069218	Potato	cytosol	64.09	63.16
CDX80450	Canola	mitochondrion	63.5	62.76
AT5G24530.1	Thale cress	mitochondrion	63.5	62.76
CDY05412	Canola	mitochondrion	63.2	62.46
TraesCS5A01G515600.2	Wheat	cytosol	70.92	62.24
Solyc06g073080.2.1	Tomato	plastid	59.05	62.19
CDY05445	Canola	plastid	62.91	62.17
Bra029414.1-P	Field mustard	plastid	62.91	62.17
Bra009771.1-P	Field mustard	mitochondrion	62.02	50.0
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	56.08	48.46
GSMUA_Achr11P...	Banana	cytosol	38.87	39.58
GSMUA_Achr10P...	Banana	cytosol	40.36	38.64
GSMUA_Achr5P08490_001	Banana	cytosol	40.36	38.1
GSMUA_Achr6P15610_001	Banana	cytosol	38.87	37.22
GSMUA_Achr5P29330_001	Banana	cytosol	39.17	37.18
GSMUA_Achr9P15020_001	Banana	cytosol	38.58	37.04
GSMUA_Achr7P15540_001	Banana	cytosol	38.87	37.01
GSMUA_Achr8P23330_001	Banana	cytosol	35.91	36.34
GSMUA_Achr9P04430_001	Banana	cytosol	35.61	36.04
GSMUA_Achr6P32920_001	Banana	cytosol	34.72	35.67
GSMUA_Achr2P19210_001	Banana	cytosol	36.8	35.53
GSMUA_Achr10P...	Banana	cytosol	35.31	35.52
GSMUA_Achr10P...	Banana	cytosol	32.64	35.14
HORVU4Hr1G089330.2	Barley	plastid	45.1	34.94
GSMUA_Achr3P07030_001	Banana	cytosol	34.12	34.53
GSMUA_Achr2P02770_001	Banana	cytosol	36.8	33.33
GSMUA_Achr7P16780_001	Banana	cytosol	35.61	32.17
GSMUA_Achr9P23620_001	Banana	cytosol	35.91	32.01
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	35.91	31.76
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	32.94	30.83
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	29.08	30.15

Protein Annotations

Gene3D:2.60.120.330	MapMan:9.2.2.3.1	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr4G30130_001
EnsemblPlants:GSMUA_Achr4P30130_001	EnsemblPlants:GSMUA_Achr4T30130_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0STC5
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF389
SUPFAM:SSF51197	UniParc:UPI000294F9F1	SEG:seg	:	:	:

Description

Putative Naringenin,2-oxoglutarate 3-dioxygenase [Source:GMGC_GENE;Acc:GSMUA_Achr4G30130_001]

Coordinates

chr4:+:27854011..27855756

Molecular Weight (calculated)

38302.6 Da

IEP (calculated)

6.241

GRAVY (calculated)

-0.341

Length

337 amino acids

Sequence
(BLAST)

001: MADQLLSTVT HHGSLPETYV RPESQRPHLN EVLRDADVPT IDLGSTDLSQ TVAQVADACS TYGFFQVVNH GVPIELMLKM MAVALEFFRL PSEEKAKLYS
101: DDPAKKMRLS TSFNVRKEKF RNWRDYLRLH CYPLEEFVPG WPSNPSSFKE VVSSYCREVR QLGFRLLGLI SIGLGLEEDY MATVLGEQEQ HMAVNYYPKC
201: PAPELTYGLQ AHTDPNALTL LLQDPDVAGL QVRKDGKWIA VNPQPNAFVV NIGDQLQALS NGRYRSVWHR AVVNADKERI SVASFLCPCN NAIISPPEKL
301: VADGSPAMYR SYTYDEYYKK FWSRNLDDEH CLQLFRS

Best Arabidopsis Sequence Match ( AT5G24530.1 )
(BLAST)

001: MAAKLISTGF RHTTLPENYV RPISDRPRLS EVSQLEDFPL IDLSSTDRSF LIQQIHQACA RFGFFQVINH GVNKQIIDEM VSVAREFFSM SMEEKMKLYS
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N

Arabidopsis Description

DMR6Protein DOWNY MILDEW RESISTANCE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.