Factsheet for GSMUA_Achr3P07030_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr2P02770_001
GSMUA_Achr4P24540_001
GSMUA_Achr6P10910_001
GSMUA_Achr6P16370_001
GSMUA_Achr7P16780_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G08640.1	GSMUA_Achr2P02770_001	AT3G51240.1	18467451
AT5G08640.1	GSMUA_Achr7P16780_001	AT3G51240.1	18467451
AT5G08640.1	GSMUA_Achr10P...	AT5G13930.1	18467451
AT5G08640.1	GSMUA_Achr10P...	AT5G13930.1	18467451
AT5G08640.1	GSMUA_Achr6P10910_001	AT5G13930.1	18467451
AT5G08640.1	GSMUA_Achr6P16370_001	AT5G13930.1	18467451
AT5G08640.1	GSMUA_Achr4P24540_001	AT5G42800.1	18467451
AT5G63590.1	GSMUA_Achr10P...	AT5G13930.1	18467451
AT5G63590.1	GSMUA_Achr10P...	AT5G13930.1	18467451
AT5G63590.1	GSMUA_Achr6P10910_001	AT5G13930.1	18467451
AT5G63590.1	GSMUA_Achr6P16370_001	AT5G13930.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	76.88	76.42
GSMUA_Achr10P...	Banana	cytosol	71.17	75.72
GSMUA_Achr8P23330_001	Banana	cytosol	69.67	69.67
VIT_18s0001g03470.t01	Wine grape	cytosol	65.47	67.7
AT5G08640.1	Thale cress	cytosol	65.77	65.18
CDY21556	Canola	cytoskeleton, cytosol, peroxisome	64.56	63.99
CDX69931	Canola	cytoskeleton, cytosol, peroxisome	64.56	63.99
Bra009358.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	64.26	63.69
VIT_18s0001g03490.t01	Wine grape	cytosol	63.66	63.28
Os02t0767300-01	Rice	cytosol	61.26	61.63
KRH18787	Soybean	cytosol	60.66	60.48
EES07584	Sorghum	cytosol	60.06	60.24
PGSC0003DMT400036565	Potato	cytosol	62.76	59.38
Solyc11g013110.1.1	Tomato	cytosol, plastid	62.76	59.38
KRH53203	Soybean	cytosol	59.16	59.16
TraesCS6D01G310700.1	Wheat	plastid	58.86	58.68
KRH16579	Soybean	cytosol, mitochondrion	53.15	58.61
TraesCS6B01G362100.1	Wheat	cytosol	58.26	58.08
TraesCS6A01G331400.1	Wheat	plastid	58.26	58.08
Zm00001d018181_P001	Maize	endoplasmic reticulum, nucleus	53.45	56.51
Zm00001d018184_P001	Maize	endoplasmic reticulum	53.45	56.51
AT5G63590.1	Thale cress	cytoskeleton, cytosol, peroxisome	50.45	54.55
TraesCS4B01G344900.1	Wheat	cytosol, plastid	48.65	52.43
TraesCS4B01G344800.1	Wheat	cytosol	50.75	52.16
TraesCS5A01G513700.1	Wheat	cytosol, plastid	52.55	52.08
TraesCS4D01G339800.1	Wheat	cytosol, plastid	52.25	51.79
Bra038648.1-P	Field mustard	cytosol	45.65	51.18
CDY41522	Canola	cytosol	45.35	50.84
Bra018076.1-P	Field mustard	cytosol	46.55	50.82
CDY39565	Canola	cytosol	46.25	50.49
CDY48154	Canola	cytosol	45.95	50.16
EES00073	Sorghum	cytosol	46.25	50.0
AT5G63580.1	Thale cress	cytoskeleton, cytosol, peroxisome	36.94	49.2
Bra038647.1-P	Field mustard	cytosol	45.05	48.86
HORVU6Hr1G056710.2	Barley	cytosol, peroxisome	10.51	48.61
Bra037747.1-P	Field mustard	cytosol	45.65	48.41
AT5G63595.1	Thale cress	cytoskeleton, cytosol, peroxisome	40.54	48.39
CDY69013	Canola	cytosol	44.44	48.21
AT5G43935.1	Thale cress	cytosol	41.74	47.44
CDY39860	Canola	cytosol	43.84	47.25
CDX97750	Canola	cytosol	31.23	47.06
CDX81188	Canola	cytosol	45.05	46.88
CDY41520	Canola	cytosol	33.93	45.75
CDY31361	Canola	cytosol	42.34	45.48
Bra029211.1-P	Field mustard	cytosol	42.04	45.16
AT5G63600.2	Thale cress	cytosol	43.24	44.17
HORVU6Hr1G080360.1	Barley	plastid	45.05	42.86
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	44.14	40.83
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	35.74	35.31
GSMUA_Achr6P15610_001	Banana	cytosol	37.24	35.23
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	36.04	35.19
GSMUA_Achr11P...	Banana	cytosol	34.83	35.05
GSMUA_Achr7P15540_001	Banana	cytosol	36.94	34.75
CDY31363	Canola	cytosol	43.54	34.36
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	34.83	34.22
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	34.53	34.12
Bra029212.1-P	Field mustard	cytosol	43.24	34.12
GSMUA_Achr5P08490_001	Banana	cytosol	36.34	33.89
GSMUA_Achr5P29330_001	Banana	cytosol	36.04	33.8
GSMUA_Achr2P19210_001	Banana	cytosol	35.14	33.52
GSMUA_Achr10P...	Banana	cytosol	35.44	33.52
CDY41521	Canola	cytosol, mitochondrion	2.1	33.33
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	33.63	33.23
GSMUA_Achr5P12830_001	Banana	cytosol	33.63	33.04
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	34.83	32.86
GSMUA_Achr1P00770_001	Banana	cytosol	33.03	32.64
GSMUA_Achr9P04430_001	Banana	cytosol	32.43	32.43
GSMUA_Achr6P32920_001	Banana	cytosol	31.83	32.32
VIT_18s0001g03510.t01	Wine grape	cytosol	65.77	32.21
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	36.34	31.03
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	33.33	29.13
GSMUA_Achr9P23620_001	Banana	cytosol	32.43	28.57
GSMUA_Achr2P02770_001	Banana	cytosol	31.83	28.49
GSMUA_Achr7P16780_001	Banana	cytosol	31.83	28.42
GSMUA_Achr9P15020_001	Banana	cytosol	29.43	27.92
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	27.03	27.69

Protein Annotations

Gene3D:2.60.120.330	MapMan:9.2.2.5.1	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr3G07030_001
EnsemblPlants:GSMUA_Achr3P07030_001	EnsemblPlants:GSMUA_Achr3T07030_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0SCH0
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF165
SUPFAM:SSF51197	UniParc:UPI000296849B	SEG:seg	:	:	:

Description

Flavonol synthase/flavanone 3-hydroxylase [Source:GMGC_GENE;Acc:GSMUA_Achr3G07030_001]

Coordinates

chr3:-:4742113..4744098

Molecular Weight (calculated)

37418.7 Da

IEP (calculated)

5.792

GRAVY (calculated)

-0.383

Length

333 amino acids

Sequence
(BLAST)

001: MEVERVQAIA SLSVATNDIP PEFVRSEHEQ PGITTYRGPV PEIPVIDLED GDEGRVTRAI AEASQEWGIF QLVNHGIPGE VIRALQRVGR EFFELPPEEK
101: EKYAAAPGSL QGYGTKLQKD LEGKKAWVDF LFHNIWPPTH VDHRAWPENP VDYRKANEEY AKHLVGLVEK MLVSLSKGLG LEADVLKHAV GGDDLEFLLK
201: INYYPPCPRP DLALGVVAHT DMSAITILIP NDVPGLQVFK DDHWFDAKYV PDAIIVHIGD QIEKLSNGRY KSVLHRTTVN KEKARMSWPV FCSPPGETVI
301: GPLPQLVSDE QPAQYKTKKY KDYAFCKLNK LPQ

Best Arabidopsis Sequence Match ( AT5G08640.1 )
(BLAST)

001: MEVERVQDIS SSSLLTEAIP LEFIRSEKEQ PAITTFRGPT PAIPVVDLSD PDEESVRRAV VKASEEWGLF QVVNHGIPTE LIRRLQDVGR KFFELPSSEK
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD

Arabidopsis Description

FLS1Flavonol synthase/flavanone 3-hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q96330]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.