Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 2
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G310700.1 | Wheat | plastid | 96.71 | 96.71 |
| TraesCS6B01G362100.1 | Wheat | cytosol | 94.61 | 94.61 |
| Os02t0767300-01 | Rice | cytosol | 76.05 | 76.74 |
| TraesCS5A01G513700.1 | Wheat | cytosol, plastid | 73.65 | 73.21 |
| EES07584 | Sorghum | cytosol | 72.75 | 73.19 |
| Zm00001d018184_P001 | Maize | endoplasmic reticulum | 68.26 | 72.38 |
| Zm00001d018181_P001 | Maize | endoplasmic reticulum, nucleus | 68.26 | 72.38 |
| HORVU6Hr1G080360.1 | Barley | plastid | 72.75 | 69.43 |
| HORVU6Hr1G056710.2 | Barley | cytosol, peroxisome | 13.47 | 62.5 |
| EES00073 | Sorghum | cytosol | 55.39 | 60.06 |
| GSMUA_Achr3P07030_001 | Banana | cytosol | 58.08 | 58.26 |
| GSMUA_Achr10P... | Banana | cytosol | 54.49 | 58.15 |
| GSMUA_Achr10P... | Banana | cytosol | 57.19 | 57.01 |
| VIT_18s0001g03470.t01 | Wine grape | cytosol | 54.49 | 56.52 |
| GSMUA_Achr8P23330_001 | Banana | cytosol | 55.69 | 55.86 |
| VIT_18s0001g03490.t01 | Wine grape | cytosol | 52.99 | 52.84 |
| AT5G08640.1 | Thale cress | cytosol | 52.99 | 52.68 |
| CDX69931 | Canola | cytoskeleton, cytosol, peroxisome | 52.69 | 52.38 |
| Bra009358.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 52.69 | 52.38 |
| CDY21556 | Canola | cytoskeleton, cytosol, peroxisome | 52.69 | 52.38 |
| KRH18787 | Soybean | cytosol | 52.1 | 52.1 |
| KRH53203 | Soybean | cytosol | 51.2 | 51.35 |
| Solyc11g013110.1.1 | Tomato | cytosol, plastid | 53.29 | 50.57 |
| PGSC0003DMT400036565 | Potato | cytosol | 52.99 | 50.28 |
| KRH16579 | Soybean | cytosol, mitochondrion | 44.31 | 49.01 |
| Bra018076.1-P | Field mustard | cytosol | 41.32 | 45.25 |
| CDY48154 | Canola | cytosol | 40.72 | 44.59 |
| CDY39565 | Canola | cytosol | 40.42 | 44.26 |
| AT5G63590.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 40.42 | 43.83 |
| CDY41522 | Canola | cytosol | 38.32 | 43.1 |
| Bra038648.1-P | Field mustard | cytosol | 38.32 | 43.1 |
| CDY39860 | Canola | cytosol | 39.52 | 42.72 |
| CDY31361 | Canola | cytosol | 39.52 | 42.58 |
| Bra029211.1-P | Field mustard | cytosol | 39.22 | 42.26 |
| CDY69013 | Canola | cytosol | 38.62 | 42.02 |
| AT5G43935.1 | Thale cress | cytosol | 36.83 | 41.98 |
| Bra038647.1-P | Field mustard | cytosol | 38.32 | 41.69 |
| CDX97750 | Canola | cytosol | 27.25 | 41.18 |
| AT5G63595.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 33.53 | 40.14 |
| Bra037747.1-P | Field mustard | cytosol | 37.72 | 40.13 |
| CDX81188 | Canola | cytosol | 37.72 | 39.38 |
| AT5G63600.2 | Thale cress | cytosol | 37.72 | 38.65 |
| CDY41520 | Canola | cytosol | 28.44 | 38.46 |
| CDY41521 | Canola | cytosol, mitochondrion | 2.4 | 38.1 |
| AT5G63580.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 27.84 | 37.2 |
| TraesCS4A01G109200.1 | Wheat | cytosol | 39.52 | 35.87 |
| TraesCS1A01G070200.1 | Wheat | cytoskeleton, cytosol, peroxisome | 38.32 | 35.75 |
| TraesCS3A01G351400.2 | Wheat | cytosol | 39.52 | 34.83 |
| TraesCS6A01G041800.1 | Wheat | cytosol | 40.42 | 34.35 |
| TraesCS5A01G154900.1 | Wheat | cytosol, nucleus, peroxisome | 36.83 | 33.61 |
| TraesCS7A01G121400.1 | Wheat | cytosol, peroxisome, plastid | 33.83 | 32.66 |
| Bra029212.1-P | Field mustard | cytosol | 40.12 | 31.75 |
| TraesCS2A01G394900.1 | Wheat | plastid | 32.93 | 31.52 |
| CDY31363 | Canola | cytosol | 39.82 | 31.52 |
| TraesCS6A01G001500.1 | Wheat | cytosol | 41.02 | 31.28 |
| TraesCS7A01G159200.1 | Wheat | plastid | 30.84 | 30.93 |
| TraesCS2A01G493500.1 | Wheat | golgi | 34.73 | 30.77 |
| TraesCS2A01G395000.1 | Wheat | cytosol | 30.84 | 30.29 |
| TraesCS4A01G311000.1 | Wheat | cytosol | 33.53 | 30.27 |
| TraesCS5A01G515600.2 | Wheat | cytosol | 33.83 | 29.43 |
| TraesCS6A01G288300.1 | Wheat | plastid | 29.94 | 29.41 |
| TraesCS2A01G487100.1 | Wheat | cytosol | 24.25 | 29.35 |
| TraesCS5A01G048400.1 | Wheat | cytosol | 29.34 | 28.82 |
| TraesCS6A01G033300.1 | Wheat | plastid | 29.64 | 28.61 |
| TraesCS6A01G055700.1 | Wheat | cytosol | 29.04 | 28.03 |
| TraesCS7A01G037700.1 | Wheat | cytosol | 23.05 | 27.9 |
| TraesCS6A01G034100.1 | Wheat | cytosol, peroxisome, plastid | 25.45 | 27.42 |
| TraesCS7A01G280900.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 33.23 | 27.21 |
| TraesCS7A01G026100.1 | Wheat | cytosol | 25.45 | 27.16 |
| TraesCS2A01G538700.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 26.05 | 26.69 |
| TraesCS1A01G008400.1 | Wheat | mitochondrion | 26.05 | 26.69 |
| TraesCS6A01G288400.1 | Wheat | cytosol | 28.44 | 26.61 |
| VIT_18s0001g03510.t01 | Wine grape | cytosol | 53.29 | 26.18 |
| TraesCS6A01G031500.1 | Wheat | cytosol | 19.76 | 25.98 |
| TraesCS2A01G538600.1 | Wheat | cytosol | 25.45 | 25.91 |
| TraesCS3A01G315300.1 | Wheat | cytosol, peroxisome, plastid | 27.54 | 25.63 |
| TraesCS3A01G445000.1 | Wheat | cytosol | 26.65 | 25.43 |
| TraesCS6A01G030500.1 | Wheat | plastid | 16.77 | 18.92 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G331400.1 | EnsemblPlantsGene:TraesCS6A01G331400 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF165 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | SEG:seg | SUPFAM:SSF51197 | MapMan:9.2.2.5.1 | : | : |
Description
No Description!
Coordinates
chr6A:+:563539402..563540489
Molecular Weight (calculated)
36763.9 Da
IEP (calculated)
6.353
GRAVY (calculated)
-0.320
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MARAAAQSVQ ALASSLGALP PEFVRPEHEQ PRATTFRGAA PPEIPVVDMS SPDAGRRMAE AAAEWGIFQV VGHGVPADAV AALQRVGRGF FALPQEEKQR
101: YAMDPGEGRT EGYGSTLRKG DLEGKKAWAD FLFHNVAPPA AVNHAVWPES PEGYRDANEA YCGHMVRLTR ELFGRLSAEL GLDEGAMAEA FGGDDVVLLQ
201: KINFYPPCPQ PELALGLAPH TDMSTLTVLL SDEVQGLQVF KDGCWYDVNY VPGALIIHIG DQIEIMSNGR YKAVLHRTTV SREKTRMSWP VFVEPPPEHV
301: VGPHRQLVAD EFPAKYKAKK FKDYKYCKIN KLPQ
101: YAMDPGEGRT EGYGSTLRKG DLEGKKAWAD FLFHNVAPPA AVNHAVWPES PEGYRDANEA YCGHMVRLTR ELFGRLSAEL GLDEGAMAEA FGGDDVVLLQ
201: KINFYPPCPQ PELALGLAPH TDMSTLTVLL SDEVQGLQVF KDGCWYDVNY VPGALIIHIG DQIEIMSNGR YKAVLHRTTV SREKTRMSWP VFVEPPPEHV
301: VGPHRQLVAD EFPAKYKAKK FKDYKYCKIN KLPQ
001: MEVERVQDIS SSSLLTEAIP LEFIRSEKEQ PAITTFRGPT PAIPVVDLSD PDEESVRRAV VKASEEWGLF QVVNHGIPTE LIRRLQDVGR KFFELPSSEK
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD
Arabidopsis Description
FLS1Flavonol synthase/flavanone 3-hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q96330]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.