Factsheet for TraesCS1A01G008400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G052600.1	Wheat	cytosol	85.28	80.35
TraesCS6A01G033300.1	Wheat	plastid	59.82	56.36
TraesCS6A01G031500.1	Wheat	cytosol	43.25	55.51
TraesCS6A01G055700.1	Wheat	cytosol	55.83	52.6
TraesCS3A01G445000.1	Wheat	cytosol	51.23	47.71
TraesCS6A01G030500.1	Wheat	plastid	41.72	45.95
TraesCS7A01G159200.1	Wheat	plastid	42.33	41.44
TraesCS6A01G288300.1	Wheat	plastid	40.18	38.53
TraesCS7A01G037700.1	Wheat	cytosol	32.21	38.04
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	38.04	36.36
TraesCS6A01G288400.1	Wheat	cytosol	39.26	35.85
TraesCS6A01G034100.1	Wheat	cytosol, peroxisome, plastid	34.05	35.81
KRH32174	Soybean	cytosol	36.81	35.19
Solyc06g083910.2.1	Tomato	cytosol	35.89	34.72
PGSC0003DMT400051681	Potato	cytosol	35.89	34.72
PGSC0003DMT400054579	Potato	cytosol	36.2	34.6
Solyc02g070080.2.1	Tomato	cytosol	35.89	33.91
KRG93692	Soybean	cytosol, nucleus, peroxisome	34.97	33.83
Solyc09g066320.1.1	Tomato	cytosol, nucleus, peroxisome	31.9	33.77
KRH18340	Soybean	cytosol	34.36	33.23
TraesCS7A01G026100.1	Wheat	cytosol	31.9	33.23
TraesCS2A01G395000.1	Wheat	cytosol	34.36	32.94
Solyc09g066310.2.1	Tomato	cytosol	33.13	32.83
PGSC0003DMT400025150	Potato	cytosol	32.82	32.52
KRH01377	Soybean	cytosol, plastid	33.44	32.25
TraesCS2A01G394900.1	Wheat	plastid	34.36	32.09
PGSC0003DMT400025139	Potato	cytosol	32.82	32.04
PGSC0003DMT400030676	Potato	mitochondrion	33.44	31.96
Solyc10g018190.1.1	Tomato	cytosol	31.6	31.5
Solyc07g043420.2.1	Tomato	cytosol	32.52	30.99
Solyc11g010410.1.1	Tomato	cytosol	31.9	30.95
TraesCS2A01G487100.1	Wheat	cytosol	25.46	30.07
PGSC0003DMT400025148	Potato	cytosol	25.46	29.86
TraesCS5A01G515600.2	Wheat	cytosol	34.36	29.17
TraesCS5A01G048400.1	Wheat	cytosol	29.75	28.53
PGSC0003DMT400041798	Potato	cytosol	29.14	28.27
PGSC0003DMT400070444	Potato	cytosol, peroxisome, plastid	30.37	28.12
Solyc11g072200.1.1	Tomato	cytosol, peroxisome, plastid	30.37	28.12
Solyc11g010400.1.1	Tomato	cytosol	28.83	27.98
TraesCS2A01G538600.1	Wheat	cytosol	27.91	27.74
TraesCS4A01G311000.1	Wheat	cytosol	31.29	27.57
TraesCS5A01G513700.1	Wheat	cytosol, plastid	27.91	27.08
TraesCS2A01G538700.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	26.69	26.69
Solyc06g073580.2.1	Tomato	cytosol	28.22	26.06
TraesCS6A01G331400.1	Wheat	plastid	26.69	26.05
KRH45093	Soybean	cytosol, mitochondrion, nucleus, peroxisome	26.07	25.99
TraesCS5A01G154900.1	Wheat	cytosol, nucleus, peroxisome	28.83	25.68
TraesCS7A01G121400.1	Wheat	cytosol, peroxisome, plastid	26.99	25.43
TraesCS2A01G493500.1	Wheat	golgi	28.83	24.93
TraesCS3A01G351400.2	Wheat	cytosol	28.53	24.54
TraesCS1A01G070200.1	Wheat	cytoskeleton, cytosol, peroxisome	26.38	24.02
TraesCS7A01G280900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	30.06	24.02
TraesCS4A01G109200.1	Wheat	cytosol	26.99	23.91
Solyc10g018170.1.1	Tomato	cytosol	15.34	23.47
TraesCS3A01G315300.1	Wheat	cytosol, peroxisome, plastid	25.15	22.84
TraesCS6A01G041800.1	Wheat	cytosol	24.23	20.1
TraesCS6A01G001500.1	Wheat	cytosol	23.31	17.35

Protein Annotations

EnsemblPlants:TraesCS1A01G008400.1	EnsemblPlantsGene:TraesCS1A01G008400	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF220	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:50.1.13	:	:

Description

No Description!

Coordinates

chr1A:+:4804373..4805448

Molecular Weight (calculated)

36024.0 Da

IEP (calculated)

6.989

GRAVY (calculated)

-0.107

Length

326 amino acids

Sequence
(BLAST)

001: MRSSRPAKSS ASSRHARTHH RNCLFIDPRH SAIDFGLGTP WMCCKQVVNH GVGDEVVGAF RSAAAEFFAM PAEEKLPYYS DDLTKPFRVD TSTTYVLDRS
101: GGGRYWRDYI QLQCFPVDRF SQDWPAEPAA FVPSLAAYAT AVRTLAATLL GLIAEGLGLE ESFFRGELSG GWTLMNVNWY PPCPDPSLTL GLLPHCDRPL
201: LTVLSQGDVS GLQAKHKGRW IAVQPVPNAF VINFGHLMEI VTNGLLQSVE HRAVTNSSAA RLSVVTIMLP DMDCRIEPAP ALVTEGGQAK FRPFLFREFN
301: EAYAAAAANR EDVLQRFRIY PAGTME

Best Arabidopsis Sequence Match ( AT2G36690.2 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.