Factsheet for PGSC0003DMT400041798

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g010400.1.1	Tomato	cytosol	90.48	90.48
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	51.49	50.73
KRH32174	Soybean	cytosol	48.81	48.09
PGSC0003DMT400051681	Potato	cytosol	47.02	46.88
PGSC0003DMT400054579	Potato	cytosol	46.43	45.75
KRG93692	Soybean	cytosol, nucleus, peroxisome	43.75	43.62
PGSC0003DMT400025148	Potato	cytosol	36.01	43.53
KRH01377	Soybean	cytosol, plastid	43.15	42.9
KRH18340	Soybean	cytosol	42.86	42.73
PGSC0003DMT400025150	Potato	cytosol	41.07	41.95
PGSC0003DMT400025139	Potato	cytosol	41.37	41.62
PGSC0003DMT400030676	Potato	mitochondrion	41.37	40.76
PGSC0003DMT400070444	Potato	cytosol, peroxisome, plastid	41.96	40.06
TraesCS7A01G159200.1	Wheat	plastid	36.61	36.94
TraesCS7D01G160100.2	Wheat	plastid	36.61	36.94
TraesCS7B01G063700.1	Wheat	plastid	36.31	36.53
EER95911	Sorghum	cytosol	35.71	35.82
KRH45093	Soybean	cytosol, mitochondrion, nucleus, peroxisome	34.82	35.78
TraesCS6D01G270600.1	Wheat	plastid	36.01	35.59
TraesCS6B01G318000.1	Wheat	plastid	35.71	35.29
TraesCS6D01G270700.1	Wheat	cytosol, peroxisome, plastid	35.42	35.0
Zm00001d020163_P001	Maize	cytosol	27.68	34.83
EES06032	Sorghum	cytosol	36.31	34.76
TraesCS6A01G288300.1	Wheat	plastid	35.12	34.71
Zm00001d051896_P001	Maize	cytosol	36.01	34.57
TraesCS6B01G317900.1	Wheat	cytosol	27.68	34.44
Os07t0169600-01	Rice	plastid	34.82	34.41
TraesCS6B01G318100.1	Wheat	plastid	34.82	34.11
HORVU7Hr1G033360.11	Barley	cytosol	36.61	33.98
TraesCS6D01G038900.1	Wheat	cytosol	32.44	33.96
TraesCS7A01G037700.1	Wheat	cytosol	27.68	33.7
TraesCS3B01G479500.1	Wheat	cytosol	34.82	33.62
TraesCS6D01G270500.1	Wheat	plastid	34.23	33.53
TraesCS3B01G486500.1	Wheat	cytosol	34.82	33.52
TraesCS3D01G411700.1	Wheat	cytosol	30.06	33.44
PGSC0003DMT400069218	Potato	cytosol	33.93	33.33
KXG23558	Sorghum	cytosol	33.93	33.33
Zm00001d035308_P001	Maize	extracellular	33.93	33.24
EES16047	Sorghum	cytosol	33.63	33.14
TraesCS6A01G288400.1	Wheat	cytosol	35.12	33.05
TraesCS3D01G437500.2	Wheat	cytosol	34.23	33.05
TraesCS6A01G033300.1	Wheat	plastid	33.93	32.95
TraesCS1B01G052600.1	Wheat	cytosol	33.93	32.95
TraesCS3B01G444500.1	Wheat	cytosol	33.63	32.94
PGSC0003DMT400001570	Potato	cytosol	33.04	32.94
EES16044	Sorghum	cytosol	32.74	32.64
KXG23555	Sorghum	cytosol	32.74	32.64
TraesCS3A01G445000.1	Wheat	cytosol	33.93	32.57
TraesCS6B01G044600.1	Wheat	cytosol	33.63	32.47
TraesCS6D01G035200.1	Wheat	cytosol	33.63	32.47
TraesCS6D01G038500.1	Wheat	plastid	33.33	32.37
TraesCS7A01G026100.1	Wheat	cytosol	30.06	32.27
TraesCS3D01G405500.1	Wheat	cytosol	33.33	32.09
TraesCS6B01G046800.1	Wheat	plastid	33.04	32.08
Zm00001d041726_P001	Maize	plastid	32.74	31.79
TraesCS6B01G048100.1	Wheat	plastid	31.25	31.53
HORVU4Hr1G089480.1	Barley	cytosol	32.74	31.25
HORVU4Hr1G081480.3	Barley	plasma membrane	31.55	30.99
TraesCS6A01G055700.1	Wheat	cytosol	31.55	30.64
PGSC0003DMT400013913	Potato	cytoskeleton, cytosol, peroxisome	23.81	30.53
TraesCS6B01G047100.1	Wheat	extracellular, vacuole	31.55	30.46
HORVU6Hr1G010980.1	Barley	cytosol	31.25	30.35
PGSC0003DMT400013920	Potato	cytoskeleton, cytosol, peroxisome	23.81	30.3
HORVU4Hr1G081490.1	Barley	cytosol, peroxisome	31.55	29.61
HORVU7Hr1G122350.2	Barley	cytosol, peroxisome, plastid	29.76	29.59
TraesCS1A01G008400.1	Wheat	mitochondrion	28.27	29.14
PGSC0003DMT400049192	Potato	cytosol	31.55	28.96
PGSC0003DMT400067044	Potato	cytosol	28.87	28.87
PGSC0003DMT400028828	Potato	cytosol	30.65	28.61
PGSC0003DMT400083728	Potato	cytosol	13.99	28.14
HORVU4Hr1G081500.1	Barley	cytosol, peroxisome	18.15	28.11
PGSC0003DMT400083733	Potato	cytosol	30.06	28.06
TraesCS6A01G030500.1	Wheat	plastid	24.7	28.04
PGSC0003DMT400013924	Potato	cytosol	9.82	27.97
PGSC0003DMT400067586	Potato	cytosol, peroxisome, plastid	28.87	27.48
TraesCS6A01G034100.1	Wheat	cytosol, peroxisome, plastid	25.3	27.42
HORVU1Hr1G071670.2	Barley	cytosol	33.63	27.36
PGSC0003DMT400049193	Potato	cytosol, mitochondrion, peroxisome	14.88	27.32
PGSC0003DMT400009175	Potato	cytosol	29.17	27.22
HORVU4Hr1G081550.2	Barley	peroxisome, plastid	22.92	27.11
PGSC0003DMT400036565	Potato	cytosol	28.27	26.99
PGSC0003DMT400070302	Potato	cytosol	29.46	26.83
PGSC0003DMT400092726	Potato	cytosol, peroxisome, plastid	27.98	26.78
PGSC0003DMT400088016	Potato	cytosol	25.89	26.69
TraesCS6A01G031500.1	Wheat	cytosol	19.94	26.38
PGSC0003DMT400009900	Potato	cytosol	29.76	26.18
PGSC0003DMT400031149	Potato	cytosol	27.68	26.12
PGSC0003DMT400029386	Potato	cytosol, nucleus, peroxisome	27.08	24.27
TraesCS6D01G000600.1	Wheat	mitochondrion	16.37	21.57
PGSC0003DMT400058554	Potato	cytosol	26.49	19.56

Protein Annotations

EntrezGene:102582989	Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M1BC07	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	EnsemblPlantsGene:PGSC0003DMG400016213	PGSC:PGSC0003DMG400016213	EnsemblPlants:PGSC0003DMT400041798	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF124	SUPFAM:SSF51197	UniParc:UPI000295212A	RefSeq:XP_015166734.1	:	:

Description

1-aminocyclopropane-1-carboxylate oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400016213]

Coordinates

chr11:-:2490950..2495029

Molecular Weight (calculated)

38438.4 Da

IEP (calculated)

6.831

GRAVY (calculated)

-0.199

Length

336 amino acids

Sequence
(BLAST)

001: MDILISNWSN VEFVPKTYIF PPESRPGKLE FPVCTDIPLI DLAHNNPDET IQQVIRACQE FGFFQVINHG VSENLMDDTM NIYKEFFKLP GEYKAKFYSN
101: DINKSCKIFS STLSYDTDEV HYWRDTFTHR CHSLEEHIPS WPDKPTNYRE VVSEYSIETR KLFNKILDMI CKGLGLEKGY FEGELSKTHL ISVNHHIPCP
201: SPSLTLGMPV HSDPNLITML QQGEVPGLQI LKDGQWIGVK HIPHTLIVIP GLQLKVISND RFRTPVHRVV THPKEVRTTI GVFLGPSPEF LVKPATALIH
301: TAPMFRAFAY PEFLEVFVGL AKFDAQLALN HFRSKS

Best Arabidopsis Sequence Match ( AT2G44800.1 )
(BLAST)

001: MEETKMSLLD DSFTSAMTLT NSGVPQVPDR YVLPPSQRPA LGSSLGTSET TLPVIDLSLL HQPFLRSLAI HEISMACKEF GFFQVINHGI PSSVVNDALD
101: AATQFFDLPV EEKMLLVSAN VHEPVRYGTS LNHSTDRVHY WRDFIKHYSH PLSKWIDMWP SNPPCYKDKV GKYAEATHLL HKQLIEAISE SLGLEKNYLQ
201: EEIEEGSQVM AVNCYPACPE PEMALGMPPH SDFSSLTILL QSSKGLQIMD CNKNWVCVPY IEGALIVQLG DQVEVMSNGI YKSVIHRVTV NKEVKRLSFA
301: SLHSLPLHKK ISPAPKLVNP NNAPAYGEFS FNDFLNYISS NDFIQERFID TIKKSSS

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IV21]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.