Factsheet for TraesCS6A01G055700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G010980.1	Barley	cytosol	90.46	90.46
TraesCS6A01G033300.1	Wheat	plastid	69.65	69.65
TraesCS6A01G031500.1	Wheat	cytosol	47.11	64.17
TraesCS6A01G030500.1	Wheat	plastid	48.27	56.42
TraesCS1A01G008400.1	Wheat	mitochondrion	52.6	55.83
TraesCS3A01G445000.1	Wheat	cytosol	55.78	55.14
TraesCS7A01G159200.1	Wheat	plastid	43.06	44.74
TraesCS6A01G288300.1	Wheat	plastid	41.62	42.35
TraesCS6A01G288400.1	Wheat	cytosol	41.33	40.06
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	37.57	38.12
TraesCS7A01G037700.1	Wheat	cytosol	29.77	37.32
KRH32174	Soybean	cytosol	36.71	37.24
TraesCS6A01G034100.1	Wheat	cytosol, peroxisome, plastid	31.79	35.48
PGSC0003DMT400054579	Potato	cytosol	34.97	35.48
TraesCS7A01G026100.1	Wheat	cytosol	32.08	35.46
PGSC0003DMT400051681	Potato	cytosol	34.39	35.31
Solyc06g083910.2.1	Tomato	cytosol	34.1	35.01
PGSC0003DMT400025150	Potato	cytosol	33.24	34.95
TraesCS2A01G395000.1	Wheat	cytosol	34.1	34.71
Solyc10g018190.1.1	Tomato	cytosol	32.66	34.56
Solyc11g010410.1.1	Tomato	cytosol	33.53	34.52
KRH18340	Soybean	cytosol	33.53	34.42
Solyc02g070080.2.1	Tomato	cytosol	34.1	34.2
KRG93692	Soybean	cytosol, nucleus, peroxisome	33.24	34.12
TraesCS2A01G394900.1	Wheat	plastid	34.39	34.1
Solyc09g066320.1.1	Tomato	cytosol, nucleus, peroxisome	30.35	34.09
Solyc09g066310.2.1	Tomato	cytosol	32.08	33.74
PGSC0003DMT400030676	Potato	mitochondrion	33.24	33.72
PGSC0003DMT400025148	Potato	cytosol	26.88	33.45
Solyc11g010400.1.1	Tomato	cytosol	32.37	33.33
PGSC0003DMT400025139	Potato	cytosol	31.21	32.34
KRH01377	Soybean	cytosol, plastid	31.5	32.25
Solyc07g043420.2.1	Tomato	cytosol	31.79	32.16
Solyc10g018170.1.1	Tomato	cytosol	19.65	31.92
Solyc11g072200.1.1	Tomato	cytosol, peroxisome, plastid	32.37	31.82
PGSC0003DMT400070444	Potato	cytosol, peroxisome, plastid	32.37	31.82
PGSC0003DMT400041798	Potato	cytosol	30.64	31.55
TraesCS2A01G487100.1	Wheat	cytosol	24.57	30.8
TraesCS7A01G121400.1	Wheat	cytosol, peroxisome, plastid	30.64	30.64
TraesCS5A01G513700.1	Wheat	cytosol, plastid	29.48	30.36
TraesCS4A01G311000.1	Wheat	cytosol	32.37	30.27
TraesCS5A01G515600.2	Wheat	cytosol	32.95	29.69
Solyc06g073580.2.1	Tomato	cytosol	30.06	29.46
TraesCS2A01G538700.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	27.75	29.45
TraesCS1A01G070200.1	Wheat	cytoskeleton, cytosol, peroxisome	30.35	29.33
TraesCS6A01G331400.1	Wheat	plastid	28.03	29.04
TraesCS2A01G538600.1	Wheat	cytosol	27.17	28.66
TraesCS7A01G280900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	33.53	28.43
TraesCS5A01G048400.1	Wheat	cytosol	27.46	27.94
TraesCS3A01G351400.2	Wheat	cytosol	30.06	27.44
TraesCS4A01G109200.1	Wheat	cytosol	28.32	26.63
KRH45093	Soybean	cytosol, mitochondrion, nucleus, peroxisome	24.86	26.3
TraesCS5A01G154900.1	Wheat	cytosol, nucleus, peroxisome	27.75	26.23
TraesCS2A01G493500.1	Wheat	golgi	28.32	25.99
TraesCS3A01G315300.1	Wheat	cytosol, peroxisome, plastid	25.72	24.79
TraesCS6A01G041800.1	Wheat	cytosol	24.57	21.63
TraesCS6A01G001500.1	Wheat	cytosol	24.28	19.18

Protein Annotations

EnsemblPlants:TraesCS6A01G055700.1	EnsemblPlantsGene:TraesCS6A01G055700	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF220	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:50.1.13	:	:

Description

No Description!

Coordinates

chr6A:+:29364895..29366242

Molecular Weight (calculated)

38547.0 Da

IEP (calculated)

6.340

GRAVY (calculated)

-0.140

Length

346 amino acids

Sequence
(BLAST)

001: MELLTDAPAH HVVPDKYVFP PGKRLDLFPD DDSPSVAFPV IDIHPDTLSD ERRRCSVAAE IIQAGKEFGF LQVVNHGVGE DVVQGFRAAA AGLFALPAEE
101: KLPYCSYDMS KHFRLATSTA FHRNQTCYWR DYFRIRCYPV TDEVTRHWPS KPPTFGTSLA EYSTAVHELS QTLLRLIAQG LGLDDGFFAG DLSSGVTQMN
201: VNYYPPCPDP SVTLGLFPHC DRHLLTVLSQ GDVAGLQARH RERWLLVPAV PGALVINFGH QMEIVTNGLL ASVEHRVVTN ATAARLSVAT LVTPKMECRI
301: GPAPEMVDKM TNPAKYREFM FSEFMETYAA ADASRERVLE SFKIHH

Best Arabidopsis Sequence Match ( AT2G36690.1 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.