Skip to main content
crop-pal logo
Potato
Search for another protein from :
Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • nucleus 1
  • plastid 2
  • peroxisome 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plastid
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
PTS1:peroxisome
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc11g072200.1.1 Tomato cytosol, peroxisome, plastid 96.02 96.02
PGSC0003DMT400054579 Potato cytosol 45.17 46.63
PGSC0003DMT400051681 Potato cytosol 44.03 45.99
VIT_07s0005g03150.t01 Wine grape cytosol, peroxisome, plastid 44.03 45.45
PGSC0003DMT400030676 Potato mitochondrion 41.48 42.82
KRH32174 Soybean cytosol 41.19 42.52
PGSC0003DMT400041798 Potato cytosol 40.06 41.96
KRH18340 Soybean cytosol 39.77 41.54
KRG93692 Soybean cytosol, nucleus, peroxisome 39.77 41.54
KRH01377 Soybean cytosol, plastid 39.49 41.12
PGSC0003DMT400025139 Potato cytosol 36.65 38.62
PGSC0003DMT400025150 Potato cytosol 35.51 37.99
TraesCS7A01G037700.1 Wheat cytosol 28.98 36.96
PGSC0003DMT400025148 Potato cytosol 28.98 36.69
TraesCS7D01G160100.2 Wheat plastid 34.66 36.64
TraesCS7B01G063700.1 Wheat plastid 34.66 36.53
TraesCS7A01G159200.1 Wheat plastid 34.09 36.04
EES16047 Sorghum cytosol 33.81 34.9
KXG23555 Sorghum cytosol 33.24 34.72
EES16044 Sorghum cytosol 33.24 34.72
TraesCS3B01G444500.1 Wheat cytosol 33.52 34.4
EER95911 Sorghum cytosol 32.39 34.03
KRH45093 Soybean cytosol, mitochondrion, nucleus, peroxisome 31.53 33.95
TraesCS3B01G486500.1 Wheat cytosol 33.24 33.52
TraesCS3B01G479500.1 Wheat cytosol 32.95 33.33
Zm00001d020163_P001 Maize cytosol 25.28 33.33
TraesCS3D01G405500.1 Wheat cytosol 32.95 33.24
Zm00001d035308_P001 Maize extracellular 32.39 33.24
TraesCS7A01G026100.1 Wheat cytosol 29.55 33.23
HORVU4Hr1G081500.1 Barley cytosol, peroxisome 20.45 33.18
HORVU7Hr1G033360.11 Barley cytosol 34.09 33.15
TraesCS6B01G044600.1 Wheat cytosol 32.67 33.05
HORVU6Hr1G010980.1 Barley cytosol 32.39 32.95
Os07t0169600-01 Rice plastid 31.82 32.94
TraesCS3D01G437500.2 Wheat cytosol 32.39 32.76
KXG23558 Sorghum cytosol 31.82 32.75
TraesCS6D01G038900.1 Wheat cytosol 29.83 32.71
EES06032 Sorghum cytosol 32.39 32.48
TraesCS6D01G035200.1 Wheat cytosol 32.1 32.47
HORVU4Hr1G081550.2 Barley peroxisome, plastid 26.14 32.39
HORVU4Hr1G089480.1 Barley cytosol 32.39 32.39
TraesCS6A01G055700.1 Wheat cytosol 31.82 32.37
PGSC0003DMT400001570 Potato cytosol 30.97 32.34
TraesCS3A01G445000.1 Wheat cytosol 32.1 32.29
TraesCS6B01G046800.1 Wheat plastid 31.53 32.08
TraesCS6A01G033300.1 Wheat plastid 31.53 32.08
TraesCS1B01G052600.1 Wheat cytosol 31.53 32.08
TraesCS6B01G318000.1 Wheat plastid 30.97 32.06
TraesCS6D01G270600.1 Wheat plastid 30.97 32.06
Zm00001d051896_P001 Maize cytosol 31.82 32.0
HORVU7Hr1G122350.2 Barley cytosol, peroxisome, plastid 30.68 31.95
HORVU4Hr1G081480.3 Barley plasma membrane 30.97 31.87
PGSC0003DMT400069218 Potato cytosol 30.97 31.87
TraesCS6D01G038500.1 Wheat plastid 31.25 31.79
TraesCS6B01G318100.1 Wheat plastid 30.97 31.78
TraesCS6D01G270500.1 Wheat plastid 30.97 31.78
TraesCS6D01G270700.1 Wheat cytosol, peroxisome, plastid 30.68 31.76
TraesCS6A01G288300.1 Wheat plastid 30.4 31.47
TraesCS6B01G048100.1 Wheat plastid 29.55 31.23
TraesCS6B01G317900.1 Wheat cytosol 23.58 30.74
Zm00001d041726_P001 Maize plastid 30.11 30.64
TraesCS3D01G411700.1 Wheat cytosol 26.14 30.46
HORVU4Hr1G081490.1 Barley cytosol, peroxisome 30.97 30.45
TraesCS1A01G008400.1 Wheat mitochondrion 28.12 30.37
TraesCS6A01G288400.1 Wheat cytosol 30.4 29.97
TraesCS6A01G031500.1 Wheat cytosol 21.31 29.53
PGSC0003DMT400013913 Potato cytoskeleton, cytosol, peroxisome 21.88 29.39
PGSC0003DMT400013920 Potato cytoskeleton, cytosol, peroxisome 21.88 29.17
TraesCS6B01G047100.1 Wheat extracellular, vacuole 28.69 29.02
PGSC0003DMT400070302 Potato cytosol 30.11 28.73
PGSC0003DMT400036565 Potato cytosol 28.69 28.69
TraesCS6A01G034100.1 Wheat cytosol, peroxisome, plastid 25.0 28.39
PGSC0003DMT400067044 Potato cytosol 26.14 27.38
PGSC0003DMT400092726 Potato cytosol, peroxisome, plastid 27.27 27.35
PGSC0003DMT400083733 Potato cytosol 27.84 27.22
PGSC0003DMT400067586 Potato cytosol, peroxisome, plastid 27.27 27.2
PGSC0003DMT400013924 Potato cytosol 9.09 27.12
HORVU1Hr1G071670.2 Barley cytosol 31.82 27.12
TraesCS6A01G030500.1 Wheat plastid 22.73 27.03
PGSC0003DMT400031149 Potato cytosol 26.99 26.69
PGSC0003DMT400028828 Potato cytosol 27.27 26.67
PGSC0003DMT400009175 Potato cytosol 27.27 26.67
PGSC0003DMT400049192 Potato cytosol 27.56 26.5
PGSC0003DMT400009900 Potato cytosol 28.69 26.44
PGSC0003DMT400049193 Potato cytosol, mitochondrion, peroxisome 13.35 25.68
PGSC0003DMT400088016 Potato cytosol 23.58 25.46
TraesCS6D01G000600.1 Wheat mitochondrion 17.9 24.71
PGSC0003DMT400083728 Potato cytosol 11.08 23.35
PGSC0003DMT400029386 Potato cytosol, nucleus, peroxisome 23.58 22.13
PGSC0003DMT400058554 Potato cytosol 23.58 18.24
Protein Annotations
EntrezGene:102593402Gene3D:2.60.120.330MapMan:50.1.13InterPro:DIOX_NGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114
InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443UniProt:M1CM66InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171
PFAM:PF14226EnsemblPlantsGene:PGSC0003DMG400027387PGSC:PGSC0003DMG400027387EnsemblPlants:PGSC0003DMT400070444PFscan:PS51471PANTHER:PTHR10209
PANTHER:PTHR10209:SF220SUPFAM:SSF51197UniParc:UPI000294971FRefSeq:XP_006340362.1SEG:seg:
Description
Hyoscyamine 6-dioxygenase [Source:PGSC_GENE;Acc:PGSC0003DMG400027387]
Coordinates
chr11:-:43788681..43791506
Molecular Weight (calculated)
39238.9 Da
IEP (calculated)
5.415
GRAVY (calculated)
-0.232
Length
352 amino acids
Sequence
(BLAST)
001: MASLVSSWSS EVNSIPEKYV VPLEKRINAD VPIGKHIPVI DLSQSSTQSI QQIIKASADF GLFQVINHGV SETLLVDALS VCKEFFKLPI EDKAKFVEKD
101: EGLSDFEPSI DQRPKLYIEK EYTPNKNGSN TNNVKDTVFW KDTFGHGCHP LTQDVINSWP EKPQKYREVI GEYALELRKL SLRILDLMCE GLGLEVGYFG
201: QEHSQTQLMV THHYPQCPDP NSTIGIGEHC DGALINLVQQ ELSGLHVRDK NGKWFGVEPI PGALVVINGL ILKVVTNGKL SSGVHRVVTN STSDRTSLGS
301: LISPIECIIE PAKLLINESN PPLFKSYSYT EYLGYYFSDT TEIEAALKPY KL
Best Arabidopsis Sequence Match ( AT2G44800.1 )
(BLAST)
001: MEETKMSLLD DSFTSAMTLT NSGVPQVPDR YVLPPSQRPA LGSSLGTSET TLPVIDLSLL HQPFLRSLAI HEISMACKEF GFFQVINHGI PSSVVNDALD
101: AATQFFDLPV EEKMLLVSAN VHEPVRYGTS LNHSTDRVHY WRDFIKHYSH PLSKWIDMWP SNPPCYKDKV GKYAEATHLL HKQLIEAISE SLGLEKNYLQ
201: EEIEEGSQVM AVNCYPACPE PEMALGMPPH SDFSSLTILL QSSKGLQIMD CNKNWVCVPY IEGALIVQLG DQVEVMSNGI YKSVIHRVTV NKEVKRLSFA
301: SLHSLPLHKK ISPAPKLVNP NNAPAYGEFS FNDFLNYISS NDFIQERFID TIKKSSS
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IV21]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.