Factsheet for PGSC0003DMT400028828

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g085190.1.1	Tomato	cytosol	90.83	90.58
PGSC0003DMT400049193	Potato	cytosol, mitochondrion, peroxisome	40.28	79.23
PGSC0003DMT400049192	Potato	cytosol	74.17	72.95
KRH38051	Soybean	cytosol, peroxisome	36.11	67.01
VIT_08s0105g00380.t01	Wine grape	cytosol	62.78	63.13
KRH00254	Soybean	plastid	56.11	58.05
KRH65721	Soybean	cytosol	59.44	57.37
KRH49391	Soybean	cytosol	60.56	57.07
PGSC0003DMT400031149	Potato	cytosol	56.39	57.02
GSMUA_Achr6P15610_001	Banana	cytosol	54.72	55.97
AT2G38240.1	Thale cress	plastid	54.17	55.24
CDY68873	Canola	plastid	53.61	54.67
CDX93319	Canola	plastid	53.61	54.67
CDY18399	Canola	plastid	53.61	54.52
Bra017132.1-P	Field mustard	plastid	53.61	54.52
CDY07746	Canola	plastid	52.78	53.82
GSMUA_Achr7P15540_001	Banana	cytosol	52.78	53.67
Bra000045.1-P	Field mustard	plastid	52.5	53.54
CDY14476	Canola	plastid	51.94	52.97
TraesCS1D01G072700.1	Wheat	cytoskeleton, cytosol, peroxisome	52.22	52.51
TraesCS1B01G088600.1	Wheat	cytoskeleton, cytosol, peroxisome	51.67	51.96
EES18946	Sorghum	cytosol	52.5	51.64
TraesCS1A01G070200.1	Wheat	cytoskeleton, cytosol, peroxisome	51.11	51.4
Os01t0832600-01	Rice	cytosol	51.67	50.82
HORVU1Hr1G015050.7	Barley	cytosol, peroxisome	51.11	50.69
EES01705	Sorghum	cytosol	53.89	50.0
TraesCS3B01G383900.1	Wheat	cytosol	51.39	49.6
TraesCS4B01G195000.1	Wheat	cytosol	50.56	49.46
TraesCS3A01G351400.2	Wheat	cytosol	51.94	49.34
Zm00001d042980_P002	Maize	cytosol	51.11	49.2
TraesCS3D01G345600.1	Wheat	cytosol	51.39	48.94
TraesCS4A01G109200.1	Wheat	cytosol	50.0	48.91
HORVU4Hr1G056500.2	Barley	cytosol, peroxisome, plastid	50.0	48.52
TraesCS4D01G195700.1	Wheat	cytosol	49.44	48.37
Zm00001d035462_P001	Maize	cytosol	51.11	48.17
Zm00001d028744_P001	Maize	cytosol	50.28	48.14
Os05t0127500-01	Rice	cytosol	47.78	46.74
Os03t0289800-01	Rice	cytosol	50.0	46.51
EER92419	Sorghum	cytosol	49.44	46.48
HORVU3Hr1G087570.4	Barley	cytosol, peroxisome, plastid	51.67	45.48
TraesCS4B01G328300.1	Wheat	cytosol	33.61	45.15
Zm00001d047744_P001	Maize	mitochondrion	50.0	44.23
Zm00001d012456_P004	Maize	plastid	52.22	39.83
PGSC0003DMT400001570	Potato	cytosol	33.06	35.31
PGSC0003DMT400013913	Potato	cytoskeleton, cytosol, peroxisome	25.56	35.11
PGSC0003DMT400013920	Potato	cytoskeleton, cytosol, peroxisome	25.56	34.85
PGSC0003DMT400069218	Potato	cytosol	33.06	34.8
PGSC0003DMT400013924	Potato	cytosol	11.39	34.75
PGSC0003DMT400067044	Potato	cytosol	30.83	33.04
PGSC0003DMT400036565	Potato	cytosol	31.94	32.67
PGSC0003DMT400070302	Potato	cytosol	33.06	32.25
PGSC0003DMT400054579	Potato	cytosol	30.0	31.67
PGSC0003DMT400092726	Potato	cytosol, peroxisome, plastid	30.56	31.34
PGSC0003DMT400067586	Potato	cytosol, peroxisome, plastid	30.56	31.16
PGSC0003DMT400051681	Potato	cytosol	29.17	31.16
PGSC0003DMT400009900	Potato	cytosol	33.06	31.15
PGSC0003DMT400083733	Potato	cytosol	31.11	31.11
PGSC0003DMT400009175	Potato	cytosol	30.83	30.83
PGSC0003DMT400041798	Potato	cytosol	28.61	30.65
PGSC0003DMT400025139	Potato	cytosol	27.78	29.94
PGSC0003DMT400025150	Potato	cytosol	27.22	29.79
PGSC0003DMT400088016	Potato	cytosol	26.67	29.45
PGSC0003DMT400030676	Potato	mitochondrion	27.22	28.74
PGSC0003DMT400025148	Potato	cytosol	21.94	28.42
PGSC0003DMT400029386	Potato	cytosol, nucleus, peroxisome	29.44	28.27
PGSC0003DMT400070444	Potato	cytosol, peroxisome, plastid	26.67	27.27
PGSC0003DMT400058554	Potato	cytosol	32.78	25.93
PGSC0003DMT400083728	Potato	cytosol	10.28	22.16

Protein Annotations

EntrezGene:102579898	Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M1ARS6	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	EnsemblPlantsGene:PGSC0003DMG400011098	PGSC:PGSC0003DMG400011098	EnsemblPlants:PGSC0003DMT400028828	PRINTS:PR00682	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF134	SUPFAM:SSF51197	UniParc:UPI0002963FB9	RefSeq:XP_006338984.1	:

Description

Oxidoreductase [Source:PGSC_GENE;Acc:PGSC0003DMG400011098]

Coordinates

chr10:+:53897252..53899696

Molecular Weight (calculated)

40907.9 Da

IEP (calculated)

8.273

GRAVY (calculated)

-0.399

Length

360 amino acids

Sequence
(BLAST)

001: MSFLQSWPEP IVRVQSLSES GIRKIPDRFV KLPSDRSFNI TDTKTTSINV PLIDLENLNS PNEFVRKETI DGISNTCREW GFFQVANHGV SHELMEKTRT
101: IWHEFFQLSL EEKQKFANSP VTYEGYGSRI GTEVGAKLDW CDYFFLHYLP EALRDENKWP RLPVSCRKLV SEYGQELVKL SKRLTTILSI GLGLNEDYIH
201: QSFGGNNETS ACLRANFYPK CPQPDLTHGL SPHSDPGGIT LLLPDTDIPG LQIRRGNNWL TVNPIPNAFI VNIGDQVQVL SNAIYKSVEH RVIVNSKKER
301: LSLAFFYNPG GDKLIKPAHQ LVTKDCPALY SPMTFNEYRS FIRTKGLTGK CQIESLKSPR

Best Arabidopsis Sequence Match ( AT3G11180.1 )
(BLAST)

001: MNNLDEIKIE SKTCLNDQEQ EVKIDNMHMS DQDKNKIEIK NKSGLGEKWP EPIVRVQSLA ESNLTSLPDR YIKPPSQRPQ TTIIDHQPEV ADINIPIIDL
101: DSLFSGNEDD KKRISEACRE WGFFQVINHG VKPELMDAAR ETWKSFFNLP VEAKEVYSNS PRTYEGYGSR LGVEKGAILD WNDYYYLHFL PLALKDFNKW
201: PSLPSNIREM NDEYGKELVK LGGRLMTILS SNLGLRAEQL QEAFGGEDVG ACLRVNYYPK CPQPELALGL SPHSDPGGMT ILLPDDQVVG LQVRHGDTWI
301: TVNPLRHAFI VNIGDQIQIL SNSKYKSVEH RVIVNSEKER VSLAFFYNPK SDIPIQPMQQ LVTSTMPPLY PPMTFDQYRL FIRTQGPRGK SHVESHISPR

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J670]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.