Factsheet for PGSC0003DMT400013920

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013913	Potato	cytoskeleton, cytosol, peroxisome	98.11	98.86
PGSC0003DMT400013924	Potato	cytosol	39.39	88.14
Solyc07g054870.2.1	Tomato	mitochondrion	90.53	59.01
PGSC0003DMT400049193	Potato	cytosol, mitochondrion, peroxisome	25.0	36.07
PGSC0003DMT400067044	Potato	cytosol	40.53	31.85
PGSC0003DMT400067586	Potato	cytosol, peroxisome, plastid	42.05	31.44
PGSC0003DMT400083733	Potato	cytosol	41.67	30.56
PGSC0003DMT400069218	Potato	cytosol	37.88	29.24
PGSC0003DMT400092726	Potato	cytosol, peroxisome, plastid	38.26	28.77
PGSC0003DMT400001570	Potato	cytosol	36.36	28.49
PGSC0003DMT400070302	Potato	cytosol	36.74	26.29
PGSC0003DMT400009900	Potato	cytosol	37.88	26.18
PGSC0003DMT400088016	Potato	cytosol	32.2	26.07
PGSC0003DMT400051681	Potato	cytosol	32.95	25.82
PGSC0003DMT400028828	Potato	cytosol	34.85	25.56
PGSC0003DMT400036565	Potato	cytosol	33.71	25.28
PGSC0003DMT400054579	Potato	cytosol	32.58	25.22
PGSC0003DMT400049192	Potato	cytosol	34.85	25.14
PGSC0003DMT400031149	Potato	cytosol	33.33	24.72
PGSC0003DMT400030676	Potato	mitochondrion	31.06	24.05
PGSC0003DMT400025150	Potato	cytosol	29.92	24.01
PGSC0003DMT400041798	Potato	cytosol	30.3	23.81
PGSC0003DMT400070444	Potato	cytosol, peroxisome, plastid	29.17	21.88
PGSC0003DMT400025148	Potato	cytosol	22.35	21.22
PGSC0003DMT400025139	Potato	cytosol	26.52	20.96
PGSC0003DMT400009175	Potato	cytosol	28.03	20.56
PGSC0003DMT400029386	Potato	cytosol, nucleus, peroxisome	28.03	19.73
PGSC0003DMT400058554	Potato	cytosol	30.68	17.8
PGSC0003DMT400083728	Potato	cytosol	10.23	16.17

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	UniProt:M1A3G9	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
EnsemblPlantsGene:PGSC0003DMG400005449	PGSC:PGSC0003DMG400005449	EnsemblPlants:PGSC0003DMT400013920	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF224
SUPFAM:SSF51197	UniParc:UPI00029627E6	:	:	:	:

Description

Flavonol synthase/flavanone 3-hydroxylase [Source:PGSC_GENE;Acc:PGSC0003DMG400005449]

Coordinates

chr7:+:48182597..48185078

Molecular Weight (calculated)

29723.6 Da

IEP (calculated)

6.096

GRAVY (calculated)

-0.344

Length

264 amino acids

Sequence
(BLAST)

001: MDGMLKVMED FFNLPLEEKM RYGSDDVMDP VRYGTSLTTT RKHNLHWRDF LRHYGGLIPH TYYLWPDNPA TYRDVAKEYL KEVWQLAVII FGAISEGLGL
101: DPDYIESSLG DEGTQLIISN YYPACPEPNK TLGLAPHSDH GGLTIVMDNG IPGMQIKRNQ TWYSVPSIPG TFVVNLGDFL EASVLSNGKY KSVEHRVIVN
201: AEAVRISIAV GHGPEMDAIV QPASPLIKEK SESKYRPIVY KDYIRAQQST IKRGKSALDE IMNN

Best Arabidopsis Sequence Match ( AT2G36690.1 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.