Factsheet for PGSC0003DMT400049193

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

plastid 1
peroxisome 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38051	Soybean	cytosol, peroxisome	77.6	73.2
PGSC0003DMT400049192	Potato	cytosol	91.26	45.63
PGSC0003DMT400028828	Potato	cytosol	79.23	40.28
KRH65721	Soybean	cytosol	75.41	37.0
VIT_08s0105g00380.t01	Wine grape	cytosol	69.95	35.75
KRH49391	Soybean	cytosol	74.32	35.6
PGSC0003DMT400031149	Potato	cytosol	68.85	35.39
GSMUA_Achr6P15610_001	Banana	cytosol	66.67	34.66
PGSC0003DMT400013924	Potato	cytosol	21.86	33.9
AT2G38240.1	Thale cress	plastid	65.03	33.71
KRH00254	Soybean	plastid	63.39	33.33
CDY07746	Canola	plastid	62.84	32.58
GSMUA_Achr7P15540_001	Banana	cytosol	62.84	32.49
CDY18399	Canola	plastid	62.84	32.49
Bra017132.1-P	Field mustard	plastid	62.84	32.49
Bra000045.1-P	Field mustard	plastid	62.3	32.29
CDY68873	Canola	plastid	61.75	32.01
CDY14476	Canola	plastid	61.75	32.01
CDX93319	Canola	plastid	61.75	32.01
EES18946	Sorghum	cytosol	62.3	31.15
TraesCS1D01G072700.1	Wheat	cytoskeleton, cytosol, peroxisome	60.11	30.73
TraesCS3A01G351400.2	Wheat	cytosol	63.39	30.61
TraesCS3B01G383900.1	Wheat	cytosol	62.3	30.56
TraesCS1A01G070200.1	Wheat	cytoskeleton, cytosol, peroxisome	59.56	30.45
TraesCS1B01G088600.1	Wheat	cytoskeleton, cytosol, peroxisome	59.56	30.45
TraesCS4B01G195000.1	Wheat	cytosol	61.2	30.43
TraesCS3D01G345600.1	Wheat	cytosol	62.84	30.42
Os01t0832600-01	Rice	cytosol	60.11	30.05
HORVU4Hr1G056500.2	Barley	cytosol, peroxisome, plastid	60.66	29.92
TraesCS4D01G195700.1	Wheat	cytosol	60.11	29.89
TraesCS4A01G109200.1	Wheat	cytosol	60.11	29.89
Zm00001d028744_P001	Maize	cytosol	61.2	29.79
HORVU1Hr1G015050.7	Barley	cytosol, peroxisome	59.02	29.75
Zm00001d035462_P001	Maize	cytosol	61.75	29.58
Zm00001d042980_P002	Maize	cytosol	59.56	29.14
Os05t0127500-01	Rice	cytosol	58.47	29.08
Os03t0289800-01	Rice	cytosol	60.66	28.68
EES01705	Sorghum	cytosol	60.66	28.61
EER92419	Sorghum	cytosol	59.56	28.46
HORVU3Hr1G087570.4	Barley	cytosol, peroxisome, plastid	62.84	28.12
Zm00001d047744_P001	Maize	mitochondrion	59.02	26.54
PGSC0003DMT400013913	Potato	cytoskeleton, cytosol, peroxisome	36.07	25.19
PGSC0003DMT400013920	Potato	cytoskeleton, cytosol, peroxisome	36.07	25.0
Zm00001d012456_P004	Maize	plastid	61.75	23.94
PGSC0003DMT400009175	Potato	cytosol	41.53	21.11
PGSC0003DMT400069218	Potato	cytosol	38.8	20.76
PGSC0003DMT400067044	Potato	cytosol	37.7	20.54
PGSC0003DMT400001570	Potato	cytosol	37.7	20.47
PGSC0003DMT400009900	Potato	cytosol	41.53	19.9
PGSC0003DMT400070302	Potato	cytosol	39.89	19.78
PGSC0003DMT400051681	Potato	cytosol	34.43	18.69
PGSC0003DMT400067586	Potato	cytosol, peroxisome, plastid	35.52	18.41
Solyc10g076670.1.1	Tomato	cytosol	22.4	18.39
PGSC0003DMT400083733	Potato	cytosol	35.52	18.06
PGSC0003DMT400092726	Potato	cytosol, peroxisome, plastid	34.43	17.95
PGSC0003DMT400054579	Potato	cytosol	33.33	17.89
TraesCS4B01G328300.1	Wheat	cytosol	25.68	17.54
PGSC0003DMT400088016	Potato	cytosol	31.15	17.48
PGSC0003DMT400036565	Potato	cytosol	33.33	17.33
PGSC0003DMT400030676	Potato	mitochondrion	32.24	17.3
PGSC0003DMT400025139	Potato	cytosol	29.51	16.17
PGSC0003DMT400025150	Potato	cytosol	28.96	16.11
PGSC0003DMT400058554	Potato	cytosol	38.8	15.6
PGSC0003DMT400041798	Potato	cytosol	27.32	14.88
PGSC0003DMT400070444	Potato	cytosol, peroxisome, plastid	25.68	13.35
PGSC0003DMT400025148	Potato	cytosol	20.22	13.31
PGSC0003DMT400029386	Potato	cytosol, nucleus, peroxisome	25.14	12.27
PGSC0003DMT400083728	Potato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400049193	EnsemblPlantsGene:PGSC0003DMG400019120	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF134	PFAM:PF03171	PFscan:PS51471	PGSC:PGSC0003DMG400019120
SUPFAM:SSF51197	UniParc:UPI0002954CF5	UniProt:M1BND5	MapMan:50.1.13	:	:

Description

Oxidoreductase [Source:PGSC_GENE;Acc:PGSC0003DMG400019120]

Coordinates

chr10:+:50188825..50189666

Molecular Weight (calculated)

20464.8 Da

IEP (calculated)

8.312

GRAVY (calculated)

-0.263

Length

183 amino acids

Sequence
(BLAST)

001: MRLCKRLTKI LSINLGLNED YLHTKFGGDN ERGACLRVNF YPKCPQPDLT LGLSPHSDPG GMTLLLPDTD VTGLQVRRGD DWITVKPVPN AFIVNMGDQI
101: QVLSNAIYKS IEHRVIVNSA KERASLAFFY NPGGDILIKP ADELVTEDWP ALYLPMTFNE YRAFIRTKGP CGKSQVESLK SPR

Best Arabidopsis Sequence Match ( AT3G55970.1 )
(BLAST)

001: MNIFQDWPEP IVRVQSLSES NLGAIPNRYV KPLSQRPNIT PHNKHNPQTT TIPIIDLGRL YTDDLTLQAK TLDEISKACR ELGFFQVVNH GMSPQLMDQA
101: KATWREFFNL PMELKNMHAN SPKTYEGYGS RLGVEKGAIL DWSDYYYLHY QPSSLKDYTK WPSLPLHCRE ILEDYCKEMV KLCENLMKIL SKNLGLQEDR
201: LQNAFGGKEE SGGCLRVNYY PKCPQPELTL GISPHSDPGG LTILLPDEQV ASLQVRGSDD AWITVEPAPH AFIVNMGDQI QMLSNSIYKS VEHRVIVNPE
301: NERLSLAFFY NPKGNVPIEP LKELVTVDSP ALYSSTTYDR YRQFIRTQGP RSKCHIDELK SPR

Arabidopsis Description

JRG21JRG21 [Source:UniProtKB/TrEMBL;Acc:A0A178V764]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.