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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 4
  • peroxisome 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, peroxisome, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:peroxisome
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY68873 Canola plastid 100.0 100.0
CDY18399 Canola plastid 96.88 96.61
CDY07746 Canola plastid 92.07 92.07
CDY14476 Canola plastid 91.78 91.78
AT2G38240.1 Thale cress plastid 83.85 83.85
KRH38051 Soybean cytosol, peroxisome 37.11 67.53
PGSC0003DMT400049193 Potato cytosol, mitochondrion, peroxisome 32.01 61.75
KRH00254 Soybean plastid 56.94 57.76
VIT_08s0105g00380.t01 Wine grape cytosol 58.36 57.54
KRH65721 Soybean cytosol 60.62 57.37
PGSC0003DMT400049192 Potato cytosol 58.64 56.56
Solyc10g076660.1.1 Tomato cytosol 58.07 56.16
KRH49391 Soybean cytosol 60.62 56.02
GSMUA_Achr7P15540_001 Banana cytosol 54.39 54.24
TraesCS1B01G088600.1 Wheat cytoskeleton, cytosol, peroxisome 54.96 54.19
TraesCS1D01G072700.1 Wheat cytoskeleton, cytosol, peroxisome 54.67 53.91
GSMUA_Achr6P15610_001 Banana cytosol 53.54 53.69
PGSC0003DMT400028828 Potato cytosol 54.67 53.61
TraesCS1A01G070200.1 Wheat cytoskeleton, cytosol, peroxisome 53.82 53.07
Solyc10g085190.1.1 Tomato cytosol 54.11 52.91
HORVU1Hr1G015050.7 Barley cytosol, peroxisome 54.39 52.89
EES18946 Sorghum cytosol 54.39 52.46
CDY04960 Canola cytosol 55.24 52.42
CDY11329 Canola cytosol 55.24 52.42
CDX80966 Canola cytosol 54.96 52.15
CDY02966 Canola cytosol 53.26 51.65
CDX76068 Canola cytosol 52.97 51.09
Os05t0127500-01 Rice cytosol 53.26 51.09
Os01t0832600-01 Rice cytosol 52.69 50.82
TraesCS4B01G195000.1 Wheat cytosol 52.97 50.82
CDY14105 Canola cytosol, nucleus, peroxisome 55.24 50.78
HORVU4Hr1G056500.2 Barley cytosol, peroxisome, plastid 53.26 50.67
TraesCS4A01G109200.1 Wheat cytosol 52.69 50.54
TraesCS3B01G383900.1 Wheat cytosol 52.97 50.13
TraesCS4D01G195700.1 Wheat cytosol 52.12 50.0
Solyc10g076670.1.1 Tomato cytosol 31.44 49.78
Zm00001d028744_P001 Maize cytosol 52.97 49.73
EES01705 Sorghum cytosol 54.39 49.48
Zm00001d035462_P001 Maize cytosol 53.54 49.48
TraesCS3A01G351400.2 Wheat cytosol 52.97 49.34
TraesCS3D01G345600.1 Wheat cytosol 52.69 49.21
Zm00001d042980_P002 Maize cytosol 51.84 48.93
EER92419 Sorghum cytosol 52.41 48.3
CDY08545 Canola cytosol 54.39 47.41
CDY01001 Canola cytosol 54.39 47.41
Os03t0289800-01 Rice cytosol 51.56 47.03
Zm00001d047744_P001 Maize mitochondrion 53.82 46.68
TraesCS4B01G328300.1 Wheat cytosol 35.41 46.64
HORVU3Hr1G087570.4 Barley cytosol, peroxisome, plastid 52.97 45.72
Zm00001d012456_P004 Maize plastid 52.97 39.62
CDY34450 Canola cytosol 35.98 37.13
CDX72185 Canola nucleus 52.69 36.9
CDY32234 Canola cytosol, nucleus, peroxisome 35.69 36.84
CDX69931 Canola cytoskeleton, cytosol, peroxisome 34.84 36.61
CDY21556 Canola cytoskeleton, cytosol, peroxisome 34.84 36.61
CDX99549 Canola vacuole 21.53 35.68
CDY48154 Canola cytosol 30.31 35.08
CDY69013 Canola cytosol 30.31 34.85
CDY39565 Canola cytosol 30.03 34.75
CDX90761 Canola plastid 34.28 34.57
CDY41520 Canola cytosol 23.8 34.01
CDX86858 Canola cytosol 32.58 33.92
CDX99548 Canola cytosol 32.01 33.33
CDY39860 Canola cytosol 29.18 33.33
CDY31361 Canola cytosol 29.18 33.23
CDY05412 Canola mitochondrion 32.01 33.14
CDX88109 Canola mitochondrion 31.73 32.84
CDY05103 Canola cytosol, nucleus, peroxisome 32.58 32.76
CDX74687 Canola cytosol 33.14 32.59
CDX90656 Canola cytosol 32.29 32.57
CDX80450 Canola mitochondrion 31.44 32.55
CDY05445 Canola plastid 31.44 32.55
CDY23457 Canola cytosol, nucleus, peroxisome 32.58 32.3
CDX99550 Canola cytosol 30.88 31.96
CDX94133 Canola cytosol 32.29 31.84
CDY30486 Canola cytosol, nucleus, peroxisome 32.01 31.74
CDY29008 Canola cytosol 31.44 31.71
CDY10816 Canola cytosol 32.01 31.56
CDY41286 Canola cytosol 32.01 31.56
CDX77983 Canola cytosol 32.01 31.56
CDX73739 Canola cytosol 32.01 31.56
CDY56988 Canola peroxisome 31.44 31.09
CDY42687 Canola peroxisome 31.44 31.01
CDX81188 Canola cytosol 28.05 30.94
CDX97750 Canola cytosol 19.26 30.77
CDY41522 Canola cytosol 25.78 30.64
CDX90759 Canola cytosol 26.06 30.46
CDX75020 Canola cytosol 31.73 30.43
CDY27251 Canola nucleus 51.84 29.47
CDX98776 Canola cytosol 32.58 29.26
CDX70044 Canola cytosol, nucleus, peroxisome 28.05 27.42
CDX76159 Canola cytoskeleton, cytosol, peroxisome 22.66 27.3
CDY65238 Canola cytosol, nucleus, peroxisome 27.76 27.15
CDX76765 Canola cytosol 18.13 26.89
CDY31363 Canola cytosol 29.46 24.64
CDY41521 Canola cytosol, mitochondrion 0.85 14.29
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13GO:A0A078JMZ7UniProt:A0A078JMZ7EnsemblPlants:CDX93319ProteinID:CDX93319
ProteinID:CDX93319.1ProteinID:CDY68873.1ncoils:CoilInterPro:DIOX_NGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00155294001InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171
PFAM:PF14226PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF134SUPFAM:SSF51197UniParc:UPI0004EC0889
Description
BnaC04g45770DBnaC04g45770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JMZ7]
Coordinates
chrLK031875:+:996916..998993
Molecular Weight (calculated)
39769.6 Da
IEP (calculated)
7.572
GRAVY (calculated)
-0.370
Length
353 amino acids
Sequence
(BLAST)
001: MVASWPEPIV SVQTLSQAGI STVPNRYVKP VHQRPVYNSD QSGLDMEVPV LDMRDVWRKP EGLRRVRNAC EEWGFFQVVN HGVDHALMES VRGAWREFFD
101: LPVEVKRKYA NSPDTYEGYG SRVGVVKDAK LDWSDYFFLN YLPSSIRNPS KWPSQPPKIR ELIEEYGEEV RKLCERLVET LSESLGLEPN HLMKAFGGED
201: KVGANLRANF YPKCPQPHLT LGLSSHSDPG GITIVLPDEE VAGLQVRRGD CWVTIKSVPN ALIVNIGDQV QILSNGIYKS VEHQVVVNSG MDRVSLALFY
301: NPRSDIPIGP VKALLTKDRP ALYKPIRFDE YRLLIRQKGP SGKNQVDSLL AST
Best Arabidopsis Sequence Match ( AT2G38240.1 )
(BLAST)
001: MATCWPEPIV SVQSLSQTGV PTVPNRYVKP AHQRPVFNTT QSDAGIEIPV LDMNDVWGKP EGLRLVRSAC EEWGFFQMVN HGVTHSLMER VRGAWREFFE
101: LPLEEKRKYA NSPDTYEGYG SRLGVVKDAK LDWSDYFFLN YLPSSIRNPS KWPSQPPKIR ELIEKYGEEV RKLCERLTET LSESLGLKPN KLMQALGGGD
201: KVGASLRTNF YPKCPQPQLT LGLSSHSDPG GITILLPDEK VAGLQVRRGD GWVTIKSVPN ALIVNIGDQL QILSNGIYKS VEHQVIVNSG MERVSLAFFY
301: NPRSDIPVGP IEELVTANRP ALYKPIRFDE YRSLIRQKGP CGKNQVDSLL LTR
Arabidopsis Description
ANSProbable 2-oxoglutarate-dependent dioxygenase ANS [Source:UniProtKB/Swiss-Prot;Acc:O80449]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.