CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04960	Canola	cytosol	94.79	97.85
Bra028752.1-P	Field mustard	cytosol	94.27	97.31
AT5G05600.1	Thale cress	cytosol	88.02	91.11
CDY11329	Canola	cytosol	86.98	89.78
CDX80966	Canola	cytosol	86.72	89.52
KRH14938	Soybean	cytosol	65.89	70.08
KRG97722	Soybean	cytosol	64.84	68.98
VIT_13s0067g01020.t01	Wine grape	cytosol	64.06	68.52
KRH31155	Soybean	cytosol	63.8	67.87
KRH73197	Soybean	cytosol	65.89	66.93
Solyc03g096050.2.1	Tomato	cytosol	61.72	66.39
PGSC0003DMT400031149	Potato	cytosol	60.94	65.73
CDY08545	Canola	cytosol	68.75	65.19
CDY01001	Canola	cytosol	67.97	64.44
CDX76068	Canola	cytosol	60.94	63.93
CDY02966	Canola	cytosol	60.42	63.74
GSMUA_Achr7P15540_001	Banana	cytosol	56.51	61.3
GSMUA_Achr6P15610_001	Banana	cytosol	54.95	59.94
TraesCS1B01G088600.1	Wheat	cytoskeleton, cytosol, peroxisome	54.17	58.1
TraesCS1D01G072700.1	Wheat	cytoskeleton, cytosol, peroxisome	53.91	57.82
TraesCS1A01G070200.1	Wheat	cytoskeleton, cytosol, peroxisome	53.91	57.82
EES18946	Sorghum	cytosol	54.17	56.83
Os01t0832600-01	Rice	cytosol	53.91	56.56
HORVU1Hr1G015050.7	Barley	cytosol, peroxisome	53.39	56.47
CDY07746	Canola	plastid	51.56	56.09
TraesCS3B01G383900.1	Wheat	cytosol	54.17	55.76
TraesCS3A01G351400.2	Wheat	cytosol	54.95	55.67
CDY18399	Canola	plastid	51.3	55.65
TraesCS3D01G345600.1	Wheat	cytosol	54.69	55.56
CDY14476	Canola	plastid	51.04	55.52
CDY68873	Canola	plastid	50.78	55.24
CDX93319	Canola	plastid	50.78	55.24
EES01705	Sorghum	cytosol	55.47	54.9
Os05t0127500-01	Rice	cytosol	52.6	54.89
Zm00001d042980_P002	Maize	cytosol	53.39	54.81
Zm00001d028744_P001	Maize	cytosol	52.86	53.99
TraesCS4A01G109200.1	Wheat	cytosol	51.56	53.8
TraesCS4B01G195000.1	Wheat	cytosol	51.3	53.53
HORVU4Hr1G056500.2	Barley	cytosol, peroxisome, plastid	51.56	53.37
TraesCS4D01G195700.1	Wheat	cytosol	50.78	52.99
Zm00001d035462_P001	Maize	cytosol	52.6	52.88
EER92419	Sorghum	cytosol	52.34	52.48
Os03t0289800-01	Rice	cytosol	52.86	52.45
TraesCS4B01G328300.1	Wheat	cytosol	36.46	52.24
HORVU3Hr1G087570.4	Barley	cytosol, peroxisome, plastid	53.65	50.37
Zm00001d047744_P001	Maize	mitochondrion	52.6	49.63
CDX72185	Canola	nucleus	59.11	45.04
Zm00001d012456_P004	Maize	plastid	54.43	44.28
CDY34450	Canola	cytosol	34.38	38.6
CDY32234	Canola	cytosol, nucleus, peroxisome	34.11	38.3
CDY21556	Canola	cytoskeleton, cytosol, peroxisome	33.33	38.1
CDX69931	Canola	cytoskeleton, cytosol, peroxisome	33.07	37.8
CDY48154	Canola	cytosol	29.95	37.7
CDY39565	Canola	cytosol	29.17	36.72
CDX90761	Canola	plastid	33.33	36.57
CDY27251	Canola	nucleus	58.85	36.39
CDY05412	Canola	mitochondrion	31.51	35.48
CDX80450	Canola	mitochondrion	31.25	35.19
CDX88109	Canola	mitochondrion	31.25	35.19
CDY39860	Canola	cytosol	28.12	34.95
CDY05445	Canola	plastid	30.99	34.9
CDX97750	Canola	cytosol	20.05	34.84
CDX99549	Canola	vacuole	19.27	34.74
CDY31361	Canola	cytosol	27.86	34.52
CDY05103	Canola	cytosol, nucleus, peroxisome	31.51	34.47
CDY69013	Canola	cytosol	27.34	34.2
CDY41522	Canola	cytosol	26.3	34.01
CDX86858	Canola	cytosol	29.95	33.92
CDY41286	Canola	cytosol	31.51	33.8
CDX99548	Canola	cytosol	29.69	33.63
CDX75020	Canola	cytosol	32.03	33.42
CDY10816	Canola	cytosol	30.99	33.24
CDY41520	Canola	cytosol	21.35	33.2
CDX90759	Canola	cytosol	26.04	33.11
CDX94133	Canola	cytosol	30.21	32.4
CDY30486	Canola	cytosol, nucleus, peroxisome	29.95	32.3
CDY23457	Canola	cytosol, nucleus, peroxisome	29.69	32.02
CDY56988	Canola	peroxisome	29.69	31.93
CDX81188	Canola	cytosol	26.56	31.88
CDX99550	Canola	cytosol	28.12	31.67
CDX77983	Canola	cytosol	29.43	31.56
CDY42687	Canola	peroxisome	29.43	31.56
CDX73739	Canola	cytosol	29.43	31.56
CDX90656	Canola	cytosol	28.65	31.43
CDY29008	Canola	cytosol	28.39	31.14
CDX74687	Canola	cytosol	28.39	30.36
CDX98776	Canola	cytosol	30.73	30.03
CDX70044	Canola	cytosol, nucleus, peroxisome	27.86	29.64
CDY65238	Canola	cytosol, nucleus, peroxisome	27.34	29.09
CDX76159	Canola	cytoskeleton, cytosol, peroxisome	21.35	27.99
CDY31363	Canola	cytosol	28.39	25.83
CDX76765	Canola	cytosol	15.62	25.21
CDY41521	Canola	cytosol, mitochondrion	0.26	4.76

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	GO:A0A078FI52	UniProt:A0A078FI52	EnsemblPlants:CDY14105	ProteinID:CDY14105
ProteinID:CDY14105.1	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00078646001	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF134	SUPFAM:SSF51197	UniParc:UPI0004EF190C	SEG:seg

Description

BnaC02g02220DBnaC02g02220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FI52]

Coordinates

chrLK032040:-:445649..448492

Molecular Weight (calculated)

43973.4 Da

IEP (calculated)

8.298

GRAVY (calculated)

-0.620

Length

384 amino acids

Sequence
(BLAST)

001: MSKRNRSKQN KKMNKNKKDV KIETEKSSMM DEWPEPIVRV QSLAESNLST LPDRYIKPAS QRPTMTEDAP AATNIPIIDL EGLFSEDGSS NDVIMAKISE
101: ACREWGFFQV VNHGVRPELM DAARENWREF FHLPVNAKET YSNSPRTYEG YGSRLGVEKG AILDWSDYYY LHHLPPRLKD FNKWPSSPPT IREVIDEYGK
201: EVVQLCERIM RVLSSNLGLK EDKFQEAFGG KNIGACLRVN YYPKCPRPEL ALGLSSHSDP GGMTILLPDD QVFGLQVRKD NTWITVKPHP HAFIVNIGDQ
301: IQILSNSTYK SVEHRVIVNS ERERVSLAFF YNPKSDIPIQ PLQELVSTHN PPLYPPMTFD QYRLFIRTQG PRGKSHVESH VSPR

Best Arabidopsis Sequence Match ( AT5G05600.1 )
(BLAST)

001: MNKNKIDVKI ETKKGSMDEW PEPIVRVQSL AESNLSSLPD RYIKPASLRP TTTEDAPTAT NIPIIDLEGL FSEEGLSDDV IMARISEACR GWGFFQVVNH
101: GVKPELMDAA RENWREFFHM PVNAKETYSN SPRTYEGYGS RLGVEKGASL DWSDYYFLHL LPHHLKDFNK WPSFPPTIRE VIDEYGEELV KLSGRIMRVL
201: STNLGLKEDK FQEAFGGENI GACLRVNYYP KCPRPELALG LSPHSDPGGM TILLPDDQVF GLQVRKDDTW ITVKPHPHAF IVNIGDQIQI LSNSTYKSVE
301: HRVIVNSDKE RVSLAFFYNP KSDIPIQPLQ ELVSTHNPPL YPPMTFDQYR LFIRTQGPQG KSHVESHISP R

Arabidopsis Description

Probable 2-oxoglutarate-dependent dioxygenase At5g05600 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.