Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- peroxisome 1
- plastid 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G10500.1 | CDX84286 | AT2G34710.1 | 21798944 |
| AT4G10500.1 | CDY31635 | AT2G34710.1 | 21798944 |
| AT4G10500.1 | CDY43661 | AT2G34710.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000713.1-P | Field mustard | plastid | 99.71 | 99.71 |
| AT4G10500.1 | Thale cress | plastid | 83.43 | 83.67 |
| CDX86858 | Canola | cytosol | 70.0 | 72.27 |
| CDY05103 | Canola | cytosol, nucleus, peroxisome | 72.29 | 72.08 |
| CDX99548 | Canola | cytosol | 69.14 | 71.39 |
| CDX90759 | Canola | cytosol | 61.43 | 71.19 |
| CDX99550 | Canola | cytosol | 68.0 | 69.79 |
| CDX99549 | Canola | vacuole | 41.71 | 68.54 |
| VIT_02s0025g02960.t01 | Wine grape | cytosol | 61.71 | 62.07 |
| VIT_02s0025g02970.t01 | Wine grape | cytosol | 61.14 | 61.49 |
| Zm00001d002564_P001 | Maize | cytosol, peroxisome, plastid | 56.86 | 56.7 |
| EES12710 | Sorghum | cytosol, peroxisome, plastid | 56.29 | 56.13 |
| Os04t0581100-01 | Rice | cytosol, peroxisome, plastid | 56.29 | 55.97 |
| TraesCS2A01G394900.1 | Wheat | plastid | 55.14 | 55.3 |
| TraesCS2B01G412900.1 | Wheat | plastid | 54.57 | 54.73 |
| HORVU2Hr1G093950.12 | Barley | peroxisome, plastid | 53.43 | 53.58 |
| CDY05445 | Canola | plastid | 51.14 | 52.49 |
| CDX88109 | Canola | mitochondrion | 51.14 | 52.49 |
| CDX80450 | Canola | mitochondrion | 50.57 | 51.91 |
| CDY05412 | Canola | mitochondrion | 50.57 | 51.91 |
| GSMUA_AchrUn_... | Banana | mitochondrion, plastid | 57.71 | 51.79 |
| TraesCS2D01G392900.1 | Wheat | plastid | 55.71 | 50.0 |
| CDY56988 | Canola | peroxisome | 36.0 | 35.29 |
| CDY32234 | Canola | cytosol, nucleus, peroxisome | 34.29 | 35.09 |
| CDY30486 | Canola | cytosol, nucleus, peroxisome | 35.43 | 34.83 |
| CDY34450 | Canola | cytosol | 34.0 | 34.8 |
| CDY11329 | Canola | cytosol | 36.86 | 34.68 |
| CDY07746 | Canola | plastid | 34.86 | 34.56 |
| CDX74687 | Canola | cytosol | 35.43 | 34.54 |
| CDX93319 | Canola | plastid | 34.57 | 34.28 |
| CDY68873 | Canola | plastid | 34.57 | 34.28 |
| CDY23457 | Canola | cytosol, nucleus, peroxisome | 34.86 | 34.27 |
| CDY18399 | Canola | plastid | 34.57 | 34.18 |
| CDY04960 | Canola | cytosol | 36.29 | 34.14 |
| CDX80966 | Canola | cytosol | 36.29 | 34.14 |
| CDY14476 | Canola | plastid | 34.29 | 33.99 |
| CDX69931 | Canola | cytoskeleton, cytosol, peroxisome | 32.57 | 33.93 |
| CDY21556 | Canola | cytoskeleton, cytosol, peroxisome | 32.57 | 33.93 |
| CDY42687 | Canola | peroxisome | 34.57 | 33.8 |
| CDX90656 | Canola | cytosol | 33.71 | 33.71 |
| CDY29008 | Canola | cytosol | 33.43 | 33.43 |
| CDX76068 | Canola | cytosol | 34.86 | 33.33 |
| CDY14105 | Canola | cytosol, nucleus, peroxisome | 36.57 | 33.33 |
| CDX77983 | Canola | cytosol | 34.0 | 33.24 |
| CDX73739 | Canola | cytosol | 34.0 | 33.24 |
| CDX75020 | Canola | cytosol | 34.86 | 33.15 |
| CDY02966 | Canola | cytosol | 34.29 | 32.97 |
| CDY48154 | Canola | cytosol | 28.29 | 32.46 |
| CDY39565 | Canola | cytosol | 28.0 | 32.13 |
| CDY65238 | Canola | cytosol, nucleus, peroxisome | 32.86 | 31.86 |
| CDY39860 | Canola | cytosol | 28.0 | 31.72 |
| CDX97750 | Canola | cytosol | 20.0 | 31.67 |
| CDX70044 | Canola | cytosol, nucleus, peroxisome | 32.57 | 31.58 |
| CDY41522 | Canola | cytosol | 26.29 | 30.98 |
| CDY69013 | Canola | cytosol | 27.14 | 30.94 |
| CDY31361 | Canola | cytosol | 26.86 | 30.32 |
| CDY41286 | Canola | cytosol | 30.29 | 29.61 |
| CDY10816 | Canola | cytosol | 29.71 | 29.05 |
| CDX76765 | Canola | cytosol | 19.71 | 28.99 |
| CDY01001 | Canola | cytosol | 33.43 | 28.89 |
| CDY41520 | Canola | cytosol | 20.29 | 28.74 |
| CDX76159 | Canola | cytoskeleton, cytosol, peroxisome | 24.0 | 28.67 |
| CDY08545 | Canola | cytosol | 32.86 | 28.4 |
| CDX81188 | Canola | cytosol | 25.43 | 27.81 |
| CDX94133 | Canola | cytosol | 28.29 | 27.65 |
| CDX98776 | Canola | cytosol | 28.57 | 25.45 |
| CDX72185 | Canola | nucleus | 35.71 | 24.8 |
| CDY31363 | Canola | cytosol | 28.0 | 23.22 |
| CDY27251 | Canola | nucleus | 34.86 | 19.65 |
| CDY41521 | Canola | cytosol, mitochondrion | 0.86 | 14.29 |
Protein Annotations
| MapMan:11.8.3.4 | Gene3D:2.60.120.330 | GO:A0A078DNB6 | EnsemblPlants:CDX90761 | ProteinID:CDX90761 | ProteinID:CDX90761.1 |
| InterPro:DIOX_N | GO:GO:0002229 | GO:GO:0002239 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006950 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009617 | GO:GO:0009620 | GO:GO:0009719 | GO:GO:0009751 | GO:GO:0009987 | GO:GO:0010150 |
| GO:GO:0016491 | GO:GO:0046244 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00151456001 | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PRINTS:PR00682 | PFscan:PS51471 |
| PANTHER:PTHR10209 | PANTHER:PTHR10209:SF251 | SUPFAM:SSF51197 | UniParc:UPI0004EEE02D | : | : |
Description
BnaA03g24410DProtein DMR6-LIKE OXYGENASE 1 [Source:Projected from Arabidopsis thaliana (AT4G10500) UniProtKB/Swiss-Prot;Acc:Q9ZSA8]
Coordinates
chrLK031864:+:382836..389118
Molecular Weight (calculated)
39773.2 Da
IEP (calculated)
6.438
GRAVY (calculated)
-0.273
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPLTSKLL VSDFASSVRH IPLTYVRPIS DRPQLSLVEN SGDTIPLIDL RDLYGPNRTK IIRQISHACS TYGFFQIKNH GVSETTVNKM LTVAREFFHQ
101: PEGERMKHYS ADSTKTTRVS TSFNVSADKI LNWRDYLRLH CFPIQDFINE WPENPVSFKE ITAEYATSVR ALVLRLLEAI SESLGLERDH ISNRLGTHAQ
201: HMAFNYYPPC PEPELTYGLP GHKDPTAITV LLQDQVSGLQ VFKDDEWIAV YPIPNTFIVN IGDQMQVISN ERYKSVLHRA VVNTEKERLS IPTFYFPSTD
301: AVISPAQELI DGQTSPAVYK SYPFVEYWDK FWDRSLATAS CLDAFKASTT
101: PEGERMKHYS ADSTKTTRVS TSFNVSADKI LNWRDYLRLH CFPIQDFINE WPENPVSFKE ITAEYATSVR ALVLRLLEAI SESLGLERDH ISNRLGTHAQ
201: HMAFNYYPPC PEPELTYGLP GHKDPTAITV LLQDQVSGLQ VFKDDEWIAV YPIPNTFIVN IGDQMQVISN ERYKSVLHRA VVNTEKERLS IPTFYFPSTD
301: AVISPAQELI DGQTSPAVYK SYPFVEYWDK FWDRSLATAS CLDAFKASTT
001: MATSAISKLL VSDFASSVHI PSNYVRPISD RPNLSEVESS GDSIPLIDLR DLHGPNRAVI VQQLASACST YGFFQIKNHG VPDTTVNKMQ TVAREFFHQP
101: ESERVKHYSA DPTKTTRLST SFNVGADKVL NWRDFLRLHC FPIEDFIEEW PSSPISFREV TAEYATSVRA LVLRLLEAIS ESLGLESDHI SNILGKHAQH
201: MAFNYYPPCP EPELTYGLPG HKDPTVITVL LQDQVSGLQV FKDDKWVAVS PIPNTFIVNI GDQMQVISND KYKSVLHRAV VNTENERLSI PTFYFPSTDA
301: VIGPAHELVN EQDSLAIYRT YPFVEYWDKF WNRSLATASC LDAFKAPTT
101: ESERVKHYSA DPTKTTRLST SFNVGADKVL NWRDFLRLHC FPIEDFIEEW PSSPISFREV TAEYATSVRA LVLRLLEAIS ESLGLESDHI SNILGKHAQH
201: MAFNYYPPCP EPELTYGLPG HKDPTVITVL LQDQVSGLQV FKDDKWVAVS PIPNTFIVNI GDQMQVISND KYKSVLHRAV VNTENERLSI PTFYFPSTDA
301: VIGPAHELVN EQDSLAIYRT YPFVEYWDKF WNRSLATASC LDAFKAPTT
Arabidopsis Description
DLO1Protein DMR6-LIKE OXYGENASE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSA8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.