Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G51240.1 | CDX69931 | AT5G08640.1 | 18467451 |
| AT3G51240.1 | CDY21556 | AT5G08640.1 | 18467451 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76159 | Canola | cytoskeleton, cytosol, peroxisome | 67.23 | 54.61 |
| AT3G51240.1 | Thale cress | cytosol | 67.23 | 44.69 |
| CDX73739 | Canola | cytosol | 66.81 | 44.41 |
| CDX77983 | Canola | cytosol | 66.39 | 44.13 |
| CDX90656 | Canola | cytosol | 64.71 | 44.0 |
| CDY29008 | Canola | cytosol | 63.45 | 43.14 |
| VIT_18s0001g14310.t01 | Wine grape | cytosol | 62.6 | 41.62 |
| PGSC0003DMT400009175 | Potato | cytosol | 61.34 | 40.56 |
| VIT_04s0023g03370.t01 | Wine grape | cytosol | 61.76 | 40.5 |
| Solyc02g083860.2.1 | Tomato | cytosol | 61.34 | 40.33 |
| KRH08080 | Soybean | cytosol | 61.34 | 39.25 |
| GSMUA_Achr7P16780_001 | Banana | cytosol | 61.34 | 39.14 |
| GSMUA_Achr2P02770_001 | Banana | cytosol | 60.92 | 38.98 |
| TraesCS2B01G613300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 56.3 | 38.4 |
| KRH69787 | Soybean | nucleus | 60.5 | 38.3 |
| Zm00001d001960_P001 | Maize | plastid | 58.82 | 38.25 |
| KRH69784 | Soybean | cytosol | 60.08 | 38.13 |
| EES13031 | Sorghum | cytosol | 58.4 | 37.17 |
| TraesCS2B01G521500.1 | Wheat | golgi | 58.4 | 36.77 |
| TraesCS2A01G493500.1 | Wheat | golgi | 57.98 | 36.6 |
| TraesCS2D01G493400.1 | Wheat | golgi, nucleus | 57.98 | 36.51 |
| KXG27349 | Sorghum | plastid | 58.4 | 32.25 |
| HORVU2Hr1G110130.3 | Barley | mitochondrion | 57.98 | 31.08 |
| Os04t0662600-00 | Rice | mitochondrion, peroxisome | 51.26 | 30.05 |
| CDX99549 | Canola | vacuole | 23.53 | 26.29 |
| CDX86858 | Canola | cytosol | 29.83 | 20.94 |
| CDX99550 | Canola | cytosol | 29.41 | 20.53 |
| CDX99548 | Canola | cytosol | 28.99 | 20.35 |
| CDX88109 | Canola | mitochondrion | 28.57 | 19.94 |
| CDX90761 | Canola | plastid | 28.99 | 19.71 |
| CDY05103 | Canola | cytosol, nucleus, peroxisome | 28.99 | 19.66 |
| CDY05412 | Canola | mitochondrion | 28.15 | 19.65 |
| CDY05445 | Canola | plastid | 28.15 | 19.65 |
| CDX80450 | Canola | mitochondrion | 28.15 | 19.65 |
| CDY18399 | Canola | plastid | 27.31 | 18.36 |
| CDY07746 | Canola | plastid | 26.89 | 18.13 |
| CDY68873 | Canola | plastid | 26.89 | 18.13 |
| CDX93319 | Canola | plastid | 26.89 | 18.13 |
| CDY14476 | Canola | plastid | 26.05 | 17.56 |
| CDY10816 | Canola | cytosol | 26.05 | 17.32 |
| CDY41286 | Canola | cytosol | 26.05 | 17.32 |
| CDX76068 | Canola | cytosol | 26.47 | 17.21 |
| CDY01001 | Canola | cytosol | 28.57 | 16.79 |
| CDX94133 | Canola | cytosol | 25.21 | 16.76 |
| CDX69931 | Canola | cytoskeleton, cytosol, peroxisome | 23.53 | 16.67 |
| CDY21556 | Canola | cytoskeleton, cytosol, peroxisome | 23.53 | 16.67 |
| CDY08545 | Canola | cytosol | 28.15 | 16.54 |
| CDY02966 | Canola | cytosol | 25.21 | 16.48 |
| CDY56988 | Canola | peroxisome | 24.37 | 16.25 |
| CDY42687 | Canola | peroxisome | 24.37 | 16.2 |
| CDY39860 | Canola | cytosol | 21.01 | 16.18 |
| CDX74687 | Canola | cytosol | 24.37 | 16.16 |
| CDX80966 | Canola | cytosol | 25.21 | 16.13 |
| CDY04960 | Canola | cytosol | 25.21 | 16.13 |
| CDY11329 | Canola | cytosol | 25.21 | 16.13 |
| CDY34450 | Canola | cytosol | 23.11 | 16.08 |
| CDY32234 | Canola | cytosol, nucleus, peroxisome | 23.11 | 16.08 |
| CDY31361 | Canola | cytosol | 20.59 | 15.81 |
| CDY30486 | Canola | cytosol, nucleus, peroxisome | 23.53 | 15.73 |
| CDY14105 | Canola | cytosol, nucleus, peroxisome | 25.21 | 15.62 |
| CDX90759 | Canola | cytosol | 19.75 | 15.56 |
| CDX75020 | Canola | cytosol | 23.95 | 15.49 |
| CDY41522 | Canola | cytosol | 19.33 | 15.49 |
| CDX97750 | Canola | cytosol | 14.29 | 15.38 |
| CDX98776 | Canola | cytosol | 25.21 | 15.27 |
| CDY23457 | Canola | cytosol, nucleus, peroxisome | 22.27 | 14.89 |
| CDY48154 | Canola | cytosol | 18.91 | 14.75 |
| CDY39565 | Canola | cytosol | 18.91 | 14.75 |
| CDY69013 | Canola | cytosol | 18.91 | 14.66 |
| Os08t0480200-01 | Rice | cytosol | 20.59 | 14.54 |
| CDY65238 | Canola | cytosol, nucleus, peroxisome | 21.43 | 14.13 |
| CDX70044 | Canola | cytosol, nucleus, peroxisome | 21.01 | 13.85 |
| CDY41520 | Canola | cytosol | 14.29 | 13.77 |
| CDX81188 | Canola | cytosol | 18.07 | 13.44 |
| CDX72185 | Canola | nucleus | 26.89 | 12.7 |
| CDY31363 | Canola | cytosol | 20.59 | 11.61 |
| CDY27251 | Canola | nucleus | 26.05 | 9.98 |
| CDY41521 | Canola | cytosol, mitochondrion | 0.42 | 4.76 |
| Os08t0480100-01 | Rice | cytosol, endoplasmic reticulum, plastid | 0.42 | 0.16 |
Protein Annotations
| EnsemblPlants:CDX76765 | EnsemblPlantsGene:GSBRNA2T00127258001 | Gene3D:2.60.120.330 | GO:A0A078CIP8 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF137 | PFAM:PF03171 | PFscan:PS51471 |
| ProteinID:CDX76765 | ProteinID:CDX76765.1 | SUPFAM:SSF51197 | UniParc:UPI0004EEF4DF | MapMan:50.1.13 | : |
Description
BnaC08g33510D
Coordinates
chrLK031808:-:953831..954745
Molecular Weight (calculated)
26592.2 Da
IEP (calculated)
7.179
GRAVY (calculated)
-0.174
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MADMTRLARD FFALTTEEKL RFDMSGGKGG FGVSSHLLAF SYVGRGYEGL EGDSAVFHVP CDYSRWPDKP EGWLKVTEDY SERLMAMGLE KAALKNACVD
101: MEQKIVVNYF PKRPKPDLAL GMRHIDHGII TSLLQDQVSC LQATRDNGKT CVTVPLVPGA LVINLGGIGH YLSNRRFMTS DHQAVVDSKS SKLFINTFLF
201: PAPHATVYPL KVRDGEKAII EEPMSFEEII TMRKLKDL
101: MEQKIVVNYF PKRPKPDLAL GMRHIDHGII TSLLQDQVSC LQATRDNGKT CVTVPLVPGA LVINLGGIGH YLSNRRFMTS DHQAVVDSKS SKLFINTFLF
201: PAPHATVYPL KVRDGEKAII EEPMSFEEII TMRKLKDL
001: MTRLARDFFA LPPEDKLRFD MSGGKKGGFI VSSHLQGEAV QDWREIVTYF SYPVRNRDYS RWPDKPEGWV KVTEEYSERL MSLACKLLEV LSEAMGLEKE
101: SLTNACVDMD QKIVVNYYPK CPQPDLTLGL KRHTDPGTIT LLLQDQVGGL QATRDNGKTW ITVQPVEGAF VVNLGDHGHF LSNGRFKNAD HQAVVNSNSS
201: RLSIATFQNP APDATVYPLK VREGEKAILE EPITFAEMYK RKMGRDLELA RLKKLAKEER DHKEVDKPVD QIFA
101: SLTNACVDMD QKIVVNYYPK CPQPDLTLGL KRHTDPGTIT LLLQDQVGGL QATRDNGKTW ITVQPVEGAF VVNLGDHGHF LSNGRFKNAD HQAVVNSNSS
201: RLSIATFQNP APDATVYPLK VREGEKAILE EPITFAEMYK RKMGRDLELA RLKKLAKEER DHKEVDKPVD QIFA
Arabidopsis Description
F3HNaringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.