Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G51240.1 | KRH16579 | AT5G08640.1 | 18467451 |
| AT3G51240.1 | KRH18787 | AT5G08640.1 | 18467451 |
| AT3G51240.1 | KRH53203 | AT5G08640.1 | 18467451 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69784 | Soybean | cytosol | 85.75 | 85.07 |
| KRH69787 | Soybean | nucleus | 84.95 | 84.04 |
| CDX77983 | Canola | cytosol | 77.15 | 80.17 |
| Bra036828.1-P | Field mustard | cytosol | 76.88 | 79.89 |
| CDX73739 | Canola | cytosol | 76.88 | 79.89 |
| CDX90656 | Canola | cytosol | 73.92 | 78.57 |
| AT3G51240.1 | Thale cress | cytosol | 75.54 | 78.49 |
| CDY29008 | Canola | cytosol | 73.66 | 78.29 |
| KRH76658 | Soybean | cytosol | 75.81 | 77.26 |
| Bra012862.1-P | Field mustard | cytosol | 72.58 | 77.14 |
| GSMUA_Achr2P02770_001 | Banana | cytosol | 75.54 | 75.54 |
| GSMUA_Achr7P16780_001 | Banana | cytosol | 73.66 | 73.46 |
| Zm00001d001960_P001 | Maize | plastid | 68.28 | 69.4 |
| EES13031 | Sorghum | cytosol | 69.35 | 68.98 |
| TraesCS2B01G613300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 64.52 | 68.77 |
| TraesCS2B01G521500.1 | Wheat | golgi | 69.35 | 68.25 |
| TraesCS2A01G493500.1 | Wheat | golgi | 69.09 | 68.17 |
| TraesCS2D01G493400.1 | Wheat | golgi, nucleus | 68.82 | 67.72 |
| CDX76765 | Canola | cytosol | 39.25 | 61.34 |
| KXG27349 | Sorghum | plastid | 70.16 | 60.56 |
| Bra014831.1-P | Field mustard | cytosol | 51.88 | 59.94 |
| CDX76159 | Canola | cytoskeleton, cytosol, peroxisome | 46.51 | 59.04 |
| HORVU2Hr1G110130.3 | Barley | mitochondrion | 68.28 | 57.21 |
| Os04t0662600-00 | Rice | mitochondrion, peroxisome | 54.57 | 50.0 |
| KRH38051 | Soybean | cytosol, peroxisome | 21.24 | 40.72 |
| KRH53636 | Soybean | cytosol | 34.41 | 37.87 |
| KRH64291 | Soybean | cytosol | 33.87 | 37.28 |
| KRH06343 | Soybean | cytosol | 33.87 | 36.52 |
| KRH47765 | Soybean | cytosol | 33.6 | 36.23 |
| KRH68971 | Soybean | cytosol | 31.99 | 34.1 |
| KRH14938 | Soybean | cytosol | 33.06 | 34.07 |
| KRH65721 | Soybean | cytosol | 33.06 | 32.98 |
| KRH57850 | Soybean | cytosol | 28.76 | 32.33 |
| KRH00254 | Soybean | plastid | 30.11 | 32.18 |
| KRH73197 | Soybean | cytosol | 32.53 | 32.01 |
| KRG97722 | Soybean | cytosol | 30.65 | 31.58 |
| KRG93692 | Soybean | cytosol, nucleus, peroxisome | 28.49 | 31.45 |
| KRH27988 | Soybean | cytosol | 29.57 | 31.25 |
| KRH53203 | Soybean | cytosol | 27.96 | 31.23 |
| KRH49391 | Soybean | cytosol | 31.99 | 31.15 |
| KRH74519 | Soybean | cytosol | 29.3 | 31.14 |
| KRH31155 | Soybean | cytosol | 30.11 | 31.02 |
| KRG98061 | Soybean | mitochondrion, plastid | 29.03 | 30.77 |
| KRH77456 | Soybean | cytosol | 29.03 | 30.68 |
| KRH18340 | Soybean | cytosol | 27.69 | 30.56 |
| KRH32174 | Soybean | cytosol | 27.96 | 30.5 |
| KRH67790 | Soybean | cytosol | 29.84 | 30.33 |
| KRH30715 | Soybean | cytosol | 29.84 | 30.25 |
| KRH40180 | Soybean | plastid | 28.49 | 30.11 |
| KRH18787 | Soybean | cytosol | 26.34 | 29.34 |
| KRH01377 | Soybean | cytosol, plastid | 26.61 | 29.29 |
| KRG96078 | Soybean | cytosol | 29.3 | 29.07 |
| KRH19976 | Soybean | cytosol | 29.57 | 28.87 |
| KRH32602 | Soybean | cytosol | 29.57 | 28.8 |
| KRH72414 | Soybean | cytosol | 26.08 | 28.53 |
| KRH16579 | Soybean | cytosol, mitochondrion | 23.12 | 28.48 |
| KRH07794 | Soybean | cytosol | 23.92 | 28.25 |
| KRH16797 | Soybean | cytosol | 25.27 | 27.65 |
| KRH49802 | Soybean | cytosol | 15.05 | 26.92 |
| KRH69638 | Soybean | cytosol, nucleus, peroxisome, plastid | 16.67 | 26.5 |
| KRH16798 | Soybean | cytosol | 24.19 | 26.47 |
| Os08t0480200-01 | Rice | cytosol | 23.92 | 26.41 |
| KRH76176 | Soybean | cytosol | 22.04 | 26.37 |
| KRH53489 | Soybean | cytosol | 25.0 | 25.69 |
| KRH45093 | Soybean | cytosol, mitochondrion, nucleus, peroxisome | 22.31 | 25.38 |
| KRH42116 | Soybean | plastid | 24.19 | 24.79 |
| KRH18071 | Soybean | cytosol | 20.7 | 21.94 |
| Os08t0480100-01 | Rice | cytosol, endoplasmic reticulum, plastid | 0.81 | 0.48 |
Protein Annotations
| EntrezGene:100799462 | Gene3D:2.60.120.330 | MapMan:9.2.2.4.3 | EMBL:ACUP02010137 | ncoils:Coil | InterPro:DIOX_N |
| EnsemblPlantsGene:GLYMA_16G128700 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009813 | GO:GO:0016491 | GO:GO:0045486 |
| GO:GO:0046872 | GO:GO:0055114 | UniProt:I1MN61 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 |
| EnsemblPlants:KRH08080 | ProteinID:KRH08080 | ProteinID:KRH08080.1 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF137 | SUPFAM:SSF51197 | UniParc:UPI000233B900 | : |
Description
hypothetical protein
Coordinates
chr16:-:28077595..28080215
Molecular Weight (calculated)
42329.9 Da
IEP (calculated)
6.792
GRAVY (calculated)
-0.469
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPTAKTDLA YLAQEKTLEL SFVRDEDERP KVAYNEFSNE VPVISLAGIH EVGGRREEIC KKIVEACKNW GIFQVVDHGV DQQLMAEMTR LAKEFFILPL
101: DEKIRFDMSG GKRGGFNVSS HLRGESVQDW REIVIYFSYP MRERDYTRWP DTPKGWRSVT ESYSEKLMAL ACNLLEVLSE AMGLEKEALT KACVDMDQKI
201: VVNYYPKCPQ PDLTLGLKRH TDPGTITLLL QDQVGGLQAT RDNGKTWITV QPVEGAFVVN LGDHCHYLSN GRFKSADHQA VVNSNHSRLS IATFQNPVPN
301: ATVYPLKVRE GEKPVMEEPI TFAEMYRRKM SKDLEIAGMK KLAKKKDFEN EKHFQELEKA KVEAKPLKEI LA
101: DEKIRFDMSG GKRGGFNVSS HLRGESVQDW REIVIYFSYP MRERDYTRWP DTPKGWRSVT ESYSEKLMAL ACNLLEVLSE AMGLEKEALT KACVDMDQKI
201: VVNYYPKCPQ PDLTLGLKRH TDPGTITLLL QDQVGGLQAT RDNGKTWITV QPVEGAFVVN LGDHCHYLSN GRFKSADHQA VVNSNHSRLS IATFQNPVPN
301: ATVYPLKVRE GEKPVMEEPI TFAEMYRRKM SKDLEIAGMK KLAKKKDFEN EKHFQELEKA KVEAKPLKEI LA
001: MTRLARDFFA LPPEDKLRFD MSGGKKGGFI VSSHLQGEAV QDWREIVTYF SYPVRNRDYS RWPDKPEGWV KVTEEYSERL MSLACKLLEV LSEAMGLEKE
101: SLTNACVDMD QKIVVNYYPK CPQPDLTLGL KRHTDPGTIT LLLQDQVGGL QATRDNGKTW ITVQPVEGAF VVNLGDHGHF LSNGRFKNAD HQAVVNSNSS
201: RLSIATFQNP APDATVYPLK VREGEKAILE EPITFAEMYK RKMGRDLELA RLKKLAKEER DHKEVDKPVD QIFA
101: SLTNACVDMD QKIVVNYYPK CPQPDLTLGL KRHTDPGTIT LLLQDQVGGL QATRDNGKTW ITVQPVEGAF VVNLGDHGHF LSNGRFKNAD HQAVVNSNSS
201: RLSIATFQNP APDATVYPLK VREGEKAILE EPITFAEMYK RKMGRDLELA RLKKLAKEER DHKEVDKPVD QIFA
Arabidopsis Description
F3HNaringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.