Factsheet for GSMUA_Achr7P16780_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr3P07030_001
GSMUA_Achr8P23330_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51240.1	GSMUA_Achr10P...	AT5G08640.1	18467451
AT3G51240.1	GSMUA_Achr10P...	AT5G08640.1	18467451
AT3G51240.1	GSMUA_Achr3P07030_001	AT5G08640.1	18467451
AT3G51240.1	GSMUA_Achr8P23330_001	AT5G08640.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P02770_001	Banana	cytosol	88.2	88.44
VIT_18s0001g14310.t01	Wine grape	cytosol	80.16	83.52
VIT_04s0023g03370.t01	Wine grape	cytosol	78.82	80.99
CDX77983	Canola	cytosol	77.48	80.73
PGSC0003DMT400009175	Potato	cytosol	77.75	80.56
Bra036828.1-P	Field mustard	cytosol	77.21	80.45
CDX73739	Canola	cytosol	77.21	80.45
Solyc02g083860.2.1	Tomato	cytosol	77.75	80.11
AT3G51240.1	Thale cress	cytosol	76.41	79.61
CDX90656	Canola	cytosol	73.73	78.57
CDY29008	Canola	cytosol	72.12	76.86
Bra012862.1-P	Field mustard	cytosol	71.85	76.57
KRH69784	Soybean	cytosol	76.14	75.73
KRH76658	Soybean	cytosol	73.46	75.07
Zm00001d001960_P001	Maize	plastid	73.46	74.86
KRH69787	Soybean	nucleus	75.34	74.73
EES13031	Sorghum	cytosol	73.99	73.8
KRH08080	Soybean	cytosol	73.46	73.66
TraesCS2B01G613300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	67.83	72.49
TraesCS2B01G521500.1	Wheat	golgi	73.19	72.22
TraesCS2D01G493400.1	Wheat	golgi, nucleus	73.19	72.22
TraesCS2A01G493500.1	Wheat	golgi	72.92	72.15
KXG27349	Sorghum	plastid	74.26	64.27
CDX76765	Canola	cytosol	39.14	61.34
HORVU2Hr1G110130.3	Barley	mitochondrion	72.12	60.59
Bra014831.1-P	Field mustard	cytosol	50.94	59.01
CDX76159	Canola	cytoskeleton, cytosol, peroxisome	46.11	58.7
Os04t0662600-00	Rice	mitochondrion, peroxisome	58.45	53.69
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	32.98	36.5
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	32.98	36.07
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	33.78	35.69
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	32.17	35.61
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	31.64	35.01
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	31.64	34.81
GSMUA_Achr11P...	Banana	cytosol	30.83	34.74
GSMUA_Achr1P00770_001	Banana	cytosol	31.1	34.42
GSMUA_Achr5P08490_001	Banana	cytosol	32.71	34.17
GSMUA_Achr10P...	Banana	cytosol	28.15	33.55
GSMUA_Achr2P19210_001	Banana	cytosol	31.37	33.52
GSMUA_Achr5P12830_001	Banana	cytosol	30.29	33.33
GSMUA_Achr10P...	Banana	cytosol	31.37	33.24
GSMUA_Achr5P29330_001	Banana	cytosol	31.1	32.68
GSMUA_Achr6P15610_001	Banana	cytosol	30.83	32.67
GSMUA_Achr6P32920_001	Banana	cytosol	28.69	32.62
GSMUA_Achr8P23330_001	Banana	cytosol	28.95	32.43
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	33.51	32.05
GSMUA_Achr3P07030_001	Banana	cytosol	28.42	31.83
GSMUA_Achr10P...	Banana	cytosol	28.42	31.64
GSMUA_Achr9P04430_001	Banana	cytosol	27.35	30.63
GSMUA_Achr7P15540_001	Banana	cytosol	28.95	30.51
GSMUA_Achr9P15020_001	Banana	cytosol	28.15	29.91
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	27.61	27.03
GSMUA_Achr9P23620_001	Banana	cytosol	27.35	26.98
Os08t0480200-01	Rice	cytosol	24.13	26.71
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	25.47	26.39
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	20.38	23.38
Os08t0480100-01	Rice	cytosol, endoplasmic reticulum, plastid	0.54	0.32

Protein Annotations

Gene3D:2.60.120.330	MapMan:9.2.2.4.3	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr7G16780_001
EnsemblPlants:GSMUA_Achr7P16780_001	EnsemblPlants:GSMUA_Achr7T16780_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0TI65
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF137
SUPFAM:SSF51197	UniParc:UPI000295A802	:	:	:	:

Description

Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr7G16780_001]

Coordinates

chr7:+:17165381..17166778

Molecular Weight (calculated)

41385.2 Da

IEP (calculated)

4.919

GRAVY (calculated)

-0.353

Length

373 amino acids

Sequence
(BLAST)

001: MAPGTALLPT NEATLRASFV RDEDERPKVA YNQFSSDIPV ISLAGVDDED GATGGRRAEI RRKIVEACED WGLFQVLDHG VDAGMISEMT RLARDFFALP
101: PEEKLRFDMS GGKKGGFIVS SHLQGEAVQD WREIVTYFSY PIGARDYSRW PDKPEGWRSV VESYSEKLMG LACKLLEVLS EAMGLDKEAL TDACVDMDQK
201: VVVNYYPKCP QPDLTLGLKR HTDPGTITLL LQDQVGGLQA TKDGGKTWIT VQPVEGAFVV NLGDHGHYLS NGRFKNADHQ AVVNSSCSRL SIATFQNPAP
301: EAIVYPLAIR EGDKPILDEP ITFSEMYRRK MSRDLELANL KNLARAEHQR LELPENANDI NVAKAKCLNE ILA

Best Arabidopsis Sequence Match ( AT3G51240.1 )
(BLAST)

001: MAPGTLTELA GESKLNSKFV RDEDERPKVA YNVFSDEIPV ISLAGIDDVD GKRGEICRQI VEACENWGIF QVVDHGVDTN LVADMTRLAR DFFALPPEDK
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA

Arabidopsis Description

F3HNaringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.