Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G493500.1 | Wheat | golgi | 98.94 | 99.2 |
| TraesCS2D01G493400.1 | Wheat | golgi, nucleus | 98.94 | 98.94 |
| TraesCS2B01G613300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 84.13 | 91.12 |
| Zm00001d001960_P001 | Maize | plastid | 79.63 | 82.24 |
| HORVU2Hr1G110130.3 | Barley | mitochondrion | 95.77 | 81.53 |
| EES13031 | Sorghum | cytosol | 80.42 | 81.28 |
| VIT_18s0001g14310.t01 | Wine grape | cytosol | 73.02 | 77.09 |
| AT3G51240.1 | Thale cress | cytosol | 71.96 | 75.98 |
| GSMUA_Achr2P02770_001 | Banana | cytosol | 74.34 | 75.54 |
| CDX77983 | Canola | cytosol | 71.16 | 75.14 |
| Bra036828.1-P | Field mustard | cytosol | 70.9 | 74.86 |
| CDX73739 | Canola | cytosol | 70.63 | 74.58 |
| PGSC0003DMT400009175 | Potato | cytosol | 70.9 | 74.44 |
| VIT_04s0023g03370.t01 | Wine grape | cytosol | 71.43 | 74.38 |
| Solyc02g083860.2.1 | Tomato | cytosol | 71.16 | 74.31 |
| CDX90656 | Canola | cytosol | 68.52 | 74.0 |
| GSMUA_Achr7P16780_001 | Banana | cytosol | 72.22 | 73.19 |
| CDY29008 | Canola | cytosol | 67.46 | 72.86 |
| Bra012862.1-P | Field mustard | cytosol | 66.93 | 72.29 |
| KXG27349 | Sorghum | plastid | 80.95 | 71.0 |
| KRH69784 | Soybean | cytosol | 69.58 | 70.13 |
| KRH69787 | Soybean | nucleus | 69.31 | 69.68 |
| KRH08080 | Soybean | cytosol | 68.25 | 69.35 |
| KRH76658 | Soybean | cytosol | 66.93 | 69.32 |
| CDX76765 | Canola | cytosol | 36.77 | 58.4 |
| Os04t0662600-00 | Rice | mitochondrion, peroxisome | 60.32 | 56.16 |
| CDX76159 | Canola | cytoskeleton, cytosol, peroxisome | 42.86 | 55.29 |
| Bra014831.1-P | Field mustard | cytosol | 47.09 | 55.28 |
| TraesCS7B01G063700.1 | Wheat | plastid | 32.28 | 36.53 |
| TraesCS4B01G344900.1 | Wheat | cytosol, plastid | 29.37 | 35.92 |
| TraesCS2B01G412900.1 | Wheat | plastid | 32.01 | 34.67 |
| TraesCS6B01G362100.1 | Wheat | cytosol | 30.42 | 34.43 |
| TraesCS4B01G344800.1 | Wheat | cytosol | 29.1 | 33.95 |
| TraesCS4B01G346900.1 | Wheat | cytosol | 29.63 | 33.33 |
| TraesCS2B01G413000.1 | Wheat | cytosol, nucleus, peroxisome | 29.63 | 32.94 |
| TraesCS7B01G020000.1 | Wheat | plastid | 29.89 | 32.66 |
| TraesCS5B01G153100.1 | Wheat | cytosol, nucleus, peroxisome | 30.69 | 31.69 |
| TraesCS3B01G383900.1 | Wheat | cytosol | 31.22 | 31.64 |
| TraesCS4B01G328300.1 | Wheat | cytosol | 22.22 | 31.34 |
| TraesCS1B01G088600.1 | Wheat | cytoskeleton, cytosol, peroxisome | 29.63 | 31.28 |
| TraesCS3B01G444500.1 | Wheat | cytosol | 28.04 | 30.9 |
| TraesCS6B01G044600.1 | Wheat | cytosol | 27.78 | 30.17 |
| TraesCS4B01G195000.1 | Wheat | cytosol | 29.37 | 30.16 |
| TraesCS1B01G052600.1 | Wheat | cytosol | 27.51 | 30.06 |
| TraesCS6B01G046800.1 | Wheat | plastid | 27.51 | 30.06 |
| TraesCS3B01G479500.1 | Wheat | cytosol | 26.72 | 29.02 |
| TraesCS3B01G486500.1 | Wheat | cytosol | 26.45 | 28.65 |
| TraesCS6B01G318000.1 | Wheat | plastid | 25.66 | 28.53 |
| TraesCS6B01G047100.1 | Wheat | extracellular, vacuole | 25.93 | 28.16 |
| TraesCS6B01G317900.1 | Wheat | cytosol | 20.11 | 28.15 |
| Os08t0480200-01 | Rice | cytosol | 24.87 | 27.89 |
| TraesCS2B01G568900.1 | Wheat | mitochondrion, plastid | 24.34 | 27.38 |
| TraesCS6B01G048100.1 | Wheat | plastid | 24.07 | 27.33 |
| TraesCS7B01G180300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 28.57 | 26.73 |
| TraesCS2B01G613000.1 | Wheat | cytosol, extracellular, peroxisome | 25.13 | 26.39 |
| TraesCS4B01G003300.1 | Wheat | plastid | 26.98 | 26.36 |
| TraesCS6B01G318100.1 | Wheat | plastid | 23.55 | 25.95 |
| TraesCS2B01G514200.1 | Wheat | cytosol, nucleus, peroxisome | 22.22 | 25.69 |
| TraesCS2B01G568800.1 | Wheat | cytosol, nucleus, peroxisome | 21.96 | 25.3 |
| TraesCS3B01G351600.1 | Wheat | cytosol | 22.49 | 23.68 |
| TraesCS5B01G053400.2 | Wheat | cytosol | 24.07 | 23.04 |
| TraesCS6B01G006200.1 | Wheat | cytosol | 25.93 | 22.27 |
| Os08t0480100-01 | Rice | cytosol, endoplasmic reticulum, plastid | 0.79 | 0.48 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G521500.1 | EnsemblPlantsGene:TraesCS2B01G521500 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | ncoils:Coil | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF137 | PFAM:PF03171 |
| PFAM:PF14226 | PFscan:PS51471 | SEG:seg | SUPFAM:SSF51197 | MapMan:9.2.2.4.3 | : |
Description
No Description!
Coordinates
chr2B:+:716551452..716553649
Molecular Weight (calculated)
41988.1 Da
IEP (calculated)
5.959
GRAVY (calculated)
-0.346
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVSNETFL PTAAWGEATL RPSFVRDEDE RPKVAHDRFS DAVPVISLDG IDGARRAEIR DRVAAACEGW GIFQVVDHGV DADLIADMTR LSREFFALPA
101: EDKLRYDMSG GKKGGFIVSS HLQGEAVQDW REIVTYFSYP VKARDYGRWP EKPAGWRAVV ERYSERLMGL SCKLLGVLSE AMGLESEALA KACVDMDQKV
201: VVNFYPRCPQ PDLTLGLKRH TDPGTITLLL QDLVGGLQAT RDGGKTWITV QPISGAFVVN LGDHGHFLSN GRFKNADHQA VVNGESSRLS IATFQNPAPD
301: ARVWPLAVRE GEEPILEEPI TFAEMYRRKM ERDLDLAKRK KQAKDQLMQQ QLQLQQQQQA VAAAPMPTAS KSLNEILA
101: EDKLRYDMSG GKKGGFIVSS HLQGEAVQDW REIVTYFSYP VKARDYGRWP EKPAGWRAVV ERYSERLMGL SCKLLGVLSE AMGLESEALA KACVDMDQKV
201: VVNFYPRCPQ PDLTLGLKRH TDPGTITLLL QDLVGGLQAT RDGGKTWITV QPISGAFVVN LGDHGHFLSN GRFKNADHQA VVNGESSRLS IATFQNPAPD
301: ARVWPLAVRE GEEPILEEPI TFAEMYRRKM ERDLDLAKRK KQAKDQLMQQ QLQLQQQQQA VAAAPMPTAS KSLNEILA
001: MAPGTLTELA GESKLNSKFV RDEDERPKVA YNVFSDEIPV ISLAGIDDVD GKRGEICRQI VEACENWGIF QVVDHGVDTN LVADMTRLAR DFFALPPEDK
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA
Arabidopsis Description
F3HNaringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.